Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 2.4e-287 991.5 502 100.0
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 1.9e-188 662.9 530 68.5
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 2.3e-181 639.4 525 66.9
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 5.1e-181 638.3 525 67.6
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 4.3e-180 635.2 524 67.0
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 1.4e-170 603.6 455 68.4
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 4.0e-170 602.1 433 71.8
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 6.9e-170 601.3 521 63.5
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 9.0e-170 600.9 520 63.5
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 5.8e-169 598.2 520 63.5
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 5.8e-169 598.2 521 63.3
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 1.7e-168 596.7 528 61.2
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 2.4e-167 592.8 528 61.9
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 2.1e-166 589.7 454 67.6
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 2.7e-166 589.3 519 61.3
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 3.9e-165 585.5 514 61.9
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.5e-164 583.6 434 69.8
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 2.5e-164 582.8 515 62.5
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 2.5e-164 582.8 524 60.7
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 2.5e-164 582.8 526 61.2
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 5.6e-164 581.6 522 60.7
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 1.3e-163 580.5 526 61.0
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 1.3e-163 580.5 516 61.4
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 1.6e-163 580.1 511 62.2
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 1.6e-163 580.1 516 64.3
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 2.1e-163 579.7 518 61.0
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 2.1e-163 579.7 515 61.4
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 6.2e-163 578.2 452 66.8
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 1.1e-162 577.4 516 60.9
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 1.1e-162 577.4 521 60.1
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 1.1e-162 577.4 522 61.1
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 1.8e-162 576.6 500 62.0
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 3.1e-162 575.9 522 60.9
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 5.3e-162 575.1 523 61.2
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 1.5e-161 573.5 528 61.9
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 3.4e-161 572.4 498 62.7
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 4.5e-161 572.0 479 62.8
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 1.0e-160 570.9 405 72.8
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 3.8e-160 568.9 490 62.9
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.4e-159 567.0 581 57.1
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 1.9e-159 566.6 511 60.1
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 1.9e-159 566.6 498 62.2
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 5.5e-159 565.1 511 62.2
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 7.1e-159 564.7 527 58.8
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 1.2e-158 563.9 438 66.2
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 1.6e-158 563.5 432 68.3
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 2.1e-158 563.1 524 59.7
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 2.1e-158 563.1 472 64.8
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 3.5e-158 562.4 465 64.3
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.0e-157 560.8 441 67.3
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 1.8e-157 560.1 482 62.4
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 3.0e-157 559.3 499 60.7
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 3.9e-157 558.9 486 62.3
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 6.7e-157 558.1 483 64.6
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 8.7e-157 557.8 519 59.9
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 5.7e-156 555.1 513 59.1
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 7.4e-156 554.7 475 61.3
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 1.3e-155 553.9 514 60.5
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 1.6e-155 553.5 435 66.7
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 2.2e-155 553.1 523 58.9
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 2.8e-155 552.7 472 64.0
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 2.8e-155 552.7 506 61.5
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 4.8e-155 552.0 594 54.7
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 6.3e-155 551.6 433 66.7
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 8.2e-155 551.2 498 60.0
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 8.2e-155 551.2 508 61.0
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 1.4e-154 550.4 520 58.7
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 1.8e-154 550.1 511 60.3
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 1.8e-154 550.1 485 60.6
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 2.4e-154 549.7 498 59.6
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 3.1e-154 549.3 432 67.1
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 5.3e-154 548.5 453 65.3
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 5.3e-154 548.5 453 65.3
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 5.3e-154 548.5 455 64.8
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 1.2e-153 547.4 437 66.6
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 1.2e-153 547.4 437 66.6
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 1.2e-153 547.4 437 66.6
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 1.2e-153 547.4 522 58.0
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 1.5e-153 547.0 498 59.6
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 2.6e-153 546.2 432 66.4
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 4.5e-153 545.4 450 64.7
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 4.5e-153 545.4 450 64.7
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 7.6e-153 544.7 496 60.3
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 1.3e-152 543.9 436 65.6
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 1.7e-152 543.5 437 66.4
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.4e-151 540.4 519 57.6
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.4e-151 540.4 507 59.4
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 5.5e-151 538.5 499 60.7
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 5.5e-151 538.5 499 60.7
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 7.2e-151 538.1 512 58.2
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 1.6e-150 537.0 528 57.2
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.1e-150 536.6 507 59.6
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 2.7e-150 536.2 502 59.8
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 6.1e-150 535.0 507 59.4
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 6.1e-150 535.0 491 58.9
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 6.1e-150 535.0 535 58.7
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 7.9e-150 534.6 474 63.3
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 1.4e-149 533.9 432 63.2
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 1.8e-149 533.5 459 63.4
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.8e-149 533.5 428 64.5
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.1e-148 530.8 480 62.3
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 2.5e-148 529.6 492 62.2
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 9.7e-148 527.7 517 57.1
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 1.3e-147 527.3 516 59.1
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 8.2e-147 524.6 507 59.2
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.8e-146 523.5 500 59.2
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 9.1e-146 521.2 620 50.8
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 2.6e-145 519.6 449 63.5
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 1.3e-144 517.3 499 57.9
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 3.6e-142 509.2 443 62.5
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 2.0e-140 503.4 429 59.9
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 5.7e-140 501.9 407 66.8
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 1.3e-139 500.7 470 59.4
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 2.2e-139 500.0 499 56.9
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 1.8e-138 496.9 481 57.4
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 5.9e-137 491.9 549 54.5
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 1.0e-136 491.1 503 55.7
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 2.6e-132 476.5 465 57.2
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 7.4e-132 474.9 446 61.7
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 9.7e-132 474.6 366 65.8
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 8.2e-131 471.5 517 49.5
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.1e-130 471.1 409 62.6
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 2.0e-129 466.8 456 59.0
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 1.1e-127 461.1 495 53.9
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 2.5e-127 459.9 505 52.9
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.2e-126 457.6 430 55.8
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 1.6e-126 457.2 427 59.7
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 2.7e-126 456.4 300 76.0
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 1.8e-125 453.8 345 69.3
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 4.4e-124 449.1 457 57.3
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 1.7e-123 447.2 330 70.6
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 3.7e-123 446.0 331 72.2
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 8.2e-123 444.9 488 50.6
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 3.5e-121 439.5 352 67.0
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 3.5e-121 439.5 378 62.2
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 4.5e-121 439.1 333 67.9
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 2.9e-120 436.4 485 51.8
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 7.2e-119 431.8 370 63.5
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 1.2e-118 431.0 447 55.9
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 9.8e-116 421.4 480 53.1
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 3.1e-114 416.4 383 60.3
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.9e-112 409.8 385 58.2
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 1.1e-111 407.9 366 59.6
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 7.2e-111 405.2 304 69.7
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 1.8e-106 390.6 405 57.3
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 1.1e-103 381.3 364 58.0
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 1.5e-100 370.9 493 47.3
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.0e-88 331.6 291 59.1
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.3e-75 288.1 292 57.2
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.9e-75 287.0 297 59.3
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 9.6e-71 271.9 155 85.8
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 9.6e-71 271.9 155 85.8
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 6.9e-69 265.8 323 52.0
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 1.2e-68 265.0 224 66.1
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 4.6e-65 253.1 444 38.3
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 4.2e-50 203.4 153 70.6
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 6.7e-40 169.5 173 55.5
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.9e-35 154.1 83 80.7
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 4.2e-34 150.2 121 60.3
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.6e-33 146.7 441 30.2
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 3.1e-29 134.0 419 28.4
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 8.5e-27 125.9 162 43.2
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.6e-23 114.4 525 26.3
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 1.5e-20 105.1 52 92.3
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 3.6e-17 94.0 51 76.5
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 8.0e-17 92.8 53 73.6
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 7.4e-15 86.3 126 46.8
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 1.0e-11 75.9 63 52.4
Sabra18G0058500 Salix brachista HOM05D004042 ORTHO05D004552 3.2e-10 70.9 36 88.9
AUR62029035 Chenopodium quinoa HOM05D004042 ORTHO05D004552 2.1e-09 68.2 36 86.1
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 1.8e-08 65.1 51 58.8
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 1.2e-07 62.4 78 48.7
PSO541G4056 Papaver somniferum HOM05D002947 ORTHO05D037275 6.3e-06 56.6 100 37.0


User provided reference genes

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