Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 1.0e-125 453.4 224 100.0
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 2.7e-102 375.6 217 83.4
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 2.5e-87 325.9 221 71.5
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 9.5e-87 323.9 223 68.6
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.8e-86 322.4 224 68.3
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 2.3e-85 319.3 208 74.0
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 4.0e-85 318.5 226 68.1
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 2.6e-84 315.8 220 67.3
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.4e-82 310.1 220 65.0
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 5.4e-82 308.1 222 65.3
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 7.0e-82 307.8 220 64.5
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.6e-81 306.6 218 67.4
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 3.5e-81 305.4 217 63.6
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 5.9e-81 304.7 223 64.1
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.7e-80 303.1 220 63.6
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 2.3e-80 302.8 219 63.5
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 6.6e-80 301.2 218 64.7
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 4.3e-79 298.5 222 63.5
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 5.6e-79 298.1 219 63.9
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.8e-77 293.1 221 62.9
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 2.3e-77 292.7 215 62.8
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.3e-77 292.7 220 61.4
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 3.1e-77 292.4 220 61.8
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.0e-77 292.0 220 61.4
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.0e-77 292.0 220 61.8
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 4.0e-77 292.0 218 63.3
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 5.2e-77 291.6 220 61.4
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.9e-77 290.8 220 61.4
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.0e-76 289.7 221 62.4
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 4.4e-76 288.5 215 63.3
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 4.4e-76 288.5 218 62.4
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 9.8e-76 287.3 220 61.4
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 2.2e-75 286.2 220 61.4
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.2e-73 280.4 220 60.0
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.6e-73 280.0 221 60.2
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 2.7e-73 279.3 221 60.2
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.7e-73 279.3 224 62.1
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 5.0e-72 275.0 222 57.2
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 8.6e-72 274.2 221 58.8
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 3.3e-71 272.3 223 59.2
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 5.6e-71 271.6 220 60.5
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 5.6e-71 271.6 221 58.4
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 9.5e-71 270.8 215 60.5
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 1.2e-70 270.4 224 58.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 2.8e-70 269.2 226 60.2
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 2.8e-70 269.2 222 57.7
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 3.6e-70 268.9 221 59.3
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 4.7e-70 268.5 221 59.7
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 8.1e-70 267.7 228 56.1
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.4e-69 266.9 215 60.0
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.8e-69 266.5 226 59.3
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 4.0e-69 265.4 223 57.8
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 7.5e-68 261.2 217 59.0
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.3e-67 260.4 220 54.1
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.7e-67 260.0 210 59.0
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.1e-66 257.3 219 57.5
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.9e-66 256.5 220 55.0
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 4.1e-66 255.4 224 53.1
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 9.2e-66 254.2 196 62.8
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 2.7e-65 252.7 243 54.7
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 2.3e-64 249.6 217 55.8
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.5e-63 246.9 217 54.4
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.9e-63 246.5 221 52.0
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 2.5e-63 246.1 222 52.7
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.6e-62 243.4 220 52.7
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.4e-61 240.4 205 54.1
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 4.0e-61 238.8 221 51.6
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.6e-60 236.1 222 53.2
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.6e-60 236.1 222 52.7
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 1.7e-59 233.4 174 64.9
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 8.4e-59 231.1 229 51.5
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 1.1e-58 230.7 223 51.6
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 1.6e-57 226.9 234 47.9
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 2.1e-57 226.5 215 52.1
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 1.9e-55 219.9 157 66.9
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.9e-55 219.9 218 45.9
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 2.4e-53 213.0 212 50.9
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 2.6e-52 209.5 157 66.2
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 6.4e-51 204.9 222 44.6
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.3e-48 197.2 219 42.9
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.6e-48 194.9 220 42.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 6.9e-45 184.9 167 53.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 4.2e-42 175.6 160 53.1
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 9.3e-42 174.5 140 59.3
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.1e-39 167.5 133 59.4
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.2e-33 147.5 96 69.8
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 2.1e-33 146.7 168 47.0
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 8.7e-24 114.8 73 67.1
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 5.5e-18 95.5 90 47.8
SEGI_23668 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 3.2e-10 69.7 218 26.1


User provided reference genes

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