Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032685.1 Olea europaea HOM05D005624 ORTHO05D006896 8.1e-137 490.3 238 100.0
CiPaw.05G096300 Carya illinoinensis HOM05D005624 ORTHO05D006896 1.7e-102 376.3 205 85.9
Cfa020947 Carpinus fangiana HOM05D005624 ORTHO05D006896 1.2e-100 370.2 205 83.4
Haze_19383 Corylus avellana HOM05D005624 ORTHO05D006896 1.2e-100 370.2 205 83.4
COL.COLO4_32213 Corchorus olitorius HOM05D005624 ORTHO05D006896 2.1e-100 369.4 205 84.9
Duzib128G1380 Durio zibethinus HOM05D005624 ORTHO05D006896 7.9e-100 367.5 205 83.9
MSTRG.8074 Avicennia marina HOM05D005624 ORTHO05D006896 2.3e-99 365.9 207 84.1
QL03p047013 Quercus lobata HOM05D005624 ORTHO05D006896 7.4e-98 360.9 204 83.3
Actinidia33983 Actinidia chinensis HOM05D005624 ORTHO05D006896 1.7e-97 359.8 205 82.9
Eucgr.J01702 Eucalyptus grandis HOM05D005624 ORTHO05D006896 2.2e-97 359.4 205 82.4
PGR119G0553 Punica granatum HOM05D005624 ORTHO05D006896 2.2e-97 359.4 205 82.0
SalBow2G1530 Salvia bowleyana HOM05D005624 ORTHO05D006896 3.7e-97 358.6 205 83.9
VMungo0251G1277 Vigna mungo HOM05D005624 ORTHO05D006896 1.1e-96 357.1 201 82.6
CANSAT25G1757 Cannabis sativa HOM05D005624 ORTHO05D006896 2.4e-96 355.9 209 81.8
Glyma.08G266400 Glycine max HOM05D005624 ORTHO05D006896 4.1e-96 355.1 201 80.6
Glyma.16G101200 Glycine max HOM05D005624 ORTHO05D006896 5.3e-96 354.8 199 81.4
Prupe.1G209600 Prunus persica HOM05D005624 ORTHO05D006896 5.3e-96 354.8 197 85.8
DCAR_028131 Daucus carota HOM05D005624 ORTHO05D006896 7.0e-96 354.4 201 80.6
Gohir.D08G238100 Gossypium hirsutum HOM05D005624 ORTHO05D006896 7.0e-96 354.4 205 81.0
GSVIVG01001144001 Vitis vinifera HOM05D005624 ORTHO05D006896 7.0e-96 354.4 205 82.4
Gorai.004G253600 Gossypium raimondii HOM05D005624 ORTHO05D006896 9.1e-96 354.0 205 80.5
Aqoxy3G01649 Aquilegia oxysepala HOM05D005624 ORTHO05D006896 1.5e-95 353.2 206 82.0
Cc11_g14800 Coffea canephora HOM05D005624 ORTHO05D006896 2.6e-95 352.4 205 82.0
PSO478G3843 Papaver somniferum HOM05D005624 ORTHO05D006896 2.6e-95 352.4 210 80.5
TWI75G1298 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 2.6e-95 352.4 207 81.2
BcaB01g05468 Brassica carinata HOM05D005624 ORTHO05D006896 3.4e-95 352.1 202 81.7
Gohir.A08G221500 Gossypium hirsutum HOM05D005624 ORTHO05D006896 3.4e-95 352.1 201 81.6
AT5G11680 Arabidopsis thaliana HOM05D005624 ORTHO05D006896 5.9e-95 351.3 206 80.6
Manes.08G097600 Manihot esculenta HOM05D005624 ORTHO05D006896 7.7e-95 350.9 205 81.0
Thecc.05G235200 Theobroma cacao HOM05D005624 ORTHO05D006896 7.7e-95 350.9 205 80.0
TAR622G0071 Trochodendron aralioides HOM05D005624 ORTHO05D006896 7.7e-95 350.9 208 81.2
Migut.L00899 Erythranthe guttata HOM05D005624 ORTHO05D006896 1.0e-94 350.5 197 83.2
Lj4g0021292 Lotus japonicus HOM05D005624 ORTHO05D006896 1.0e-94 350.5 201 82.1
THA.LOC104811263 Tarenaya hassleriana HOM05D005624 ORTHO05D006896 1.0e-94 350.5 205 80.0
MD13G1135700 Malus domestica HOM05D005624 ORTHO05D006896 1.7e-94 349.7 203 81.8
Atru.chr12.1491 Acer truncatum HOM05D005624 ORTHO05D006896 3.8e-94 348.6 205 80.5
Lj3A918T40 Lonicera japonica HOM05D005624 ORTHO05D006896 3.8e-94 348.6 197 82.2
MD16G1131300 Malus domestica HOM05D005624 ORTHO05D006896 3.8e-94 348.6 204 82.4
Aa31LG3G15530 Aethionema arabicum HOM05D000602 ORTHO05D001147 5.0e-94 348.2 208 78.8
AL6G22400 Arabidopsis lyrata HOM05D005624 ORTHO05D006896 5.0e-94 348.2 206 79.1
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 5.0e-94 348.2 197 82.2
BolC3t13101H Brassica oleracea HOM05D005624 ORTHO05D006896 5.0e-94 348.2 197 82.2
BraA03t09846Z Brassica rapa HOM05D005624 ORTHO05D006896 5.0e-94 348.2 204 80.4
Sp6g31930 Schrenkiella parvula HOM05D005624 ORTHO05D006896 6.5e-94 347.8 206 78.2
Carub.0006s1018 Capsella rubella HOM05D005624 ORTHO05D006896 8.5e-94 347.4 206 79.1
ClCG10G013180 Citrullus lanatus HOM05D005624 ORTHO05D006896 8.5e-94 347.4 205 80.5
Ciclev10005917m.g Citrus clementina HOM05D005624 ORTHO05D006896 8.5e-94 347.4 203 79.3
Hma1.2p1_0562F.1_g179050 Hydrangea macrophylla HOM05D005624 ORTHO05D006896 1.1e-93 347.1 206 81.1
PSO017G6046 Papaver somniferum HOM05D005624 ORTHO05D006896 1.1e-93 347.1 210 79.5
Phvul.003G274200 Phaseolus vulgaris HOM05D005624 ORTHO05D006896 1.4e-93 346.7 204 79.4
Peaxi162Scf00334g00119 Petunia axillaris HOM05D005624 ORTHO05D006896 2.5e-93 345.9 205 80.5
CSS0016097 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 3.2e-93 345.5 205 79.0
Rhsim12G0090500 Rhododendron simsii HOM05D005624 ORTHO05D006896 1.2e-92 343.6 205 79.5
FvH4_4g21930 Fragaria vesca HOM05D005624 ORTHO05D006896 2.1e-92 342.8 201 81.1
Thhalv10014678m.g Eutrema salsugineum HOM05D005624 ORTHO05D006896 3.6e-92 342.0 208 77.9
BcaC03g13386 Brassica carinata HOM05D005624 ORTHO05D006896 4.7e-92 341.7 201 79.6
CARHR201540 Cardamine hirsuta HOM05D005624 ORTHO05D006896 6.1e-92 341.3 204 77.9
CiPaw.06G112400 Carya illinoinensis HOM05D005624 ORTHO05D006896 6.1e-92 341.3 217 77.0
BolC2t06481H Brassica oleracea HOM05D005624 ORTHO05D006896 1.0e-91 340.5 205 77.1
FAN17G0486 Fragaria x ananassa HOM05D005624 ORTHO05D006896 1.0e-91 340.5 201 80.6
AUR62008562 Chenopodium quinoa HOM05D005624 ORTHO05D006896 2.3e-91 339.3 196 81.1
RcHm_v2.0_Chr4g0428141 Rosa chinensis HOM05D005624 ORTHO05D006896 2.3e-91 339.3 201 80.6
CsaV3_3G043430 Cucumis sativus L. HOM05D005624 ORTHO05D006896 3.0e-91 339.0 205 79.0
Sc17g0003450 Simmondsia chinensis HOM05D005624 ORTHO05D006896 3.0e-91 339.0 206 80.1
Sed0005404 Sechium edule HOM05D005624 ORTHO05D006896 3.9e-91 338.6 205 78.0
Ah.03g134040 Amaranthus hybridus HOM05D005624 ORTHO05D006896 5.2e-91 338.2 196 81.1
unitig_22.g6367 Utricularia gibba HOM05D005624 ORTHO05D006896 6.7e-91 337.8 202 77.7
AUR62033199 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.1e-90 337.0 196 80.6
Sopen02g002020 Solanum pennellii HOM05D005624 ORTHO05D006896 1.1e-90 337.0 195 82.6
TWI18G0768 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 1.1e-90 337.0 207 75.8
CAN.G39.18 Capsicum annuum HOM05D005624 ORTHO05D006896 2.0e-90 336.3 195 81.5
Sabra01G0051200 Salix brachista HOM05D005624 ORTHO05D006896 3.3e-90 335.5 205 78.5
TPR.G6115 Trifolium pratense HOM05D005624 ORTHO05D006896 3.3e-90 335.5 205 77.6
Medtr8g070860 Medicago truncatula HOM05D005624 ORTHO05D006896 4.4e-90 335.1 199 78.4
Potri.003G158200 Populus trichocarpa HOM05D005624 ORTHO05D006896 4.4e-90 335.1 205 77.6
Lsat_1_v5_gn_1_78160 Lactuca sativa HOM05D005624 ORTHO05D006896 5.7e-90 334.7 198 80.3
unitig_8.g3112 Utricularia gibba HOM05D005624 ORTHO05D006896 7.4e-90 334.3 228 71.5
PGSC0003DMG400029983 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.3e-89 333.6 195 81.0
Sed0018373 Sechium edule HOM05D005624 ORTHO05D006896 1.7e-89 333.2 202 77.2
Hund05398 Selenicereus undatus HOM05D005624 ORTHO05D006896 1.7e-89 333.2 202 77.7
HanXRQChr10g0312121 Helianthus annuus HOM05D005624 ORTHO05D006896 3.7e-89 332.0 203 77.8
Solyc02g005603.1 Solanum lycopersicum HOM05D005624 ORTHO05D006896 3.7e-89 332.0 195 82.1
HPP92_013550 Vanilla planifolia HOM05D005624 ORTHO05D006896 9.1e-88 327.4 199 78.4
Psat4g111480 Pisum sativum HOM05D005624 ORTHO05D006896 1.6e-87 326.6 198 76.3
Potri.001G072600 Populus trichocarpa HOM05D005624 ORTHO05D006896 1.6e-87 326.6 205 76.6
Nitab4.5_0001089g0030 Nicotiana tabacum HOM05D005624 ORTHO05D006896 3.5e-87 325.5 195 79.5
Zm00001eb102600 Zea mays HOM05D005624 ORTHO05D006896 1.0e-86 323.9 199 75.9
Zm00001eb318180 Zea mays HOM05D005624 ORTHO05D006896 1.0e-86 323.9 199 75.9
EL10Ac7g17520 Beta vulgaris HOM05D005624 ORTHO05D006896 1.7e-86 323.2 196 77.0
ECA236G4393 Erigeron canadensis HOM05D000127 ORTHO05D000243 2.2e-86 322.8 193 79.3
Nitab4.5_0011777g0020 Nicotiana tabacum HOM05D005624 ORTHO05D006896 2.9e-86 322.4 195 77.9
ATR0582G264 Amborella trichopoda HOM05D005624 ORTHO05D006896 3.8e-86 322.0 209 73.7
Peaxi162Scf00681g00118 Petunia axillaris HOM05D005624 ORTHO05D006896 1.6e-84 316.6 195 76.4
arahy.Tifrunner.gnm1.ann1.CA7SJ1 Arachis hypogaea HOM05D005624 ORTHO05D006896 3.6e-84 315.5 198 76.3
arahy.Tifrunner.gnm1.ann1.YB0CZG Arachis hypogaea HOM05D005624 ORTHO05D006896 3.6e-84 315.5 198 76.3
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 1.3e-81 307.0 184 78.8
PGSC0003DMG402032565 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.4e-80 303.5 195 74.4
Sopen04g004320 Solanum pennellii HOM05D005624 ORTHO05D006896 2.4e-80 302.8 195 74.4
Solyc04g009190.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 9.1e-80 300.8 195 73.8
MELO3C026760.2 Cucumis melo HOM05D005624 ORTHO05D006896 3.2e-77 292.4 171 81.3
Duzib177G0503 Durio zibethinus HOM05D005624 ORTHO05D006896 3.2e-77 292.4 203 71.4
Peaxi162Scf00021g02113 Petunia axillaris HOM05D005624 ORTHO05D006896 5.4e-72 275.0 201 65.7
vmacro16032 Vaccinium macrocarpon HOM05D005624 ORTHO05D006896 1.6e-71 273.5 371 43.9
HanXRQChr01g0012261 Helianthus annuus HOM05D005624 ORTHO05D006896 4.5e-71 271.9 196 65.8
Lsat_1_v5_gn_5_173840 Lactuca sativa HOM05D005624 ORTHO05D006896 4.5e-71 271.9 197 68.0
Zm00001eb071390 Zea mays HOM05D005624 ORTHO05D006896 3.3e-69 265.8 160 76.9
Dinv02966 Davidia involucrata HOM05D005624 ORTHO05D006896 5.2e-67 258.5 150 82.0
Pp3c7_9270 Physcomitrium patens HOM05D005624 ORTHO05D006896 2.2e-65 253.1 201 59.7
SMO164G0111 Selaginella moellendorffii HOM05D005624 ORTHO05D006896 8.3e-65 251.1 197 59.4
Nitab4.5_0004301g0080 Nicotiana tabacum HOM05D005624 ORTHO05D006896 1.1e-64 250.8 206 63.1
Nitab4.5_0000069g0230 Nicotiana tabacum HOM05D005624 ORTHO05D006896 1.8e-64 250.0 206 63.1
Mapoly0097s0090 Marchantia polymorpha HOM05D005624 ORTHO05D006896 3.5e-63 245.7 194 61.3
Solyc01g008220.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 1.0e-59 234.2 195 61.5
AagrBONN_evm.TU.Sc2ySwM_117.3158 Anthoceros agrestis HOM05D005624 ORTHO05D006896 2.0e-58 229.9 202 54.5
MBI11_g04265_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 2.6e-58 229.6 160 66.9
MBI07_g41258_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 9.2e-56 221.1 134 79.1
CAN.G619.7 Capsicum annuum HOM05D005624 ORTHO05D006896 4.6e-55 218.8 140 75.7
Gohir.A13G159151 Gossypium hirsutum HOM05D005624 ORTHO05D006896 3.1e-51 206.1 145 73.1
Gorai.013G198700 Gossypium raimondii HOM05D005624 ORTHO05D006896 3.1e-51 206.1 145 73.1
Lalb_Chr05g0228971 Lupinus albus HOM05D005624 ORTHO05D006896 8.9e-51 204.5 125 74.4
Zm00001eb052330 Zea mays HOM05D005624 ORTHO05D006896 7.0e-48 194.9 119 74.8
Zm00001eb036000 Zea mays HOM05D005624 ORTHO05D006896 9.2e-48 194.5 119 74.8
Migut.L00595 Erythranthe guttata HOM05D005624 ORTHO05D006896 8.1e-44 181.4 97 84.5
PGSC0003DMG400016363 Solanum tuberosum HOM05D005624 ORTHO05D006896 2.3e-43 179.9 166 58.4
CBR_g24147 Chara braunii HOM05D005624 ORTHO05D006896 2.1e-36 156.8 151 51.7
C02p05330 Brassica napus HOM05D005624 ORTHO05D006896 7.1e-32 141.7 94 73.4
Cre03.g189100 Chlamydomonas reinhardtii HOM05D005624 ORTHO05D006896 2.1e-31 140.2 199 41.7
CAN.G282.51 Capsicum annuum HOM05D005624 ORTHO05D006896 4.7e-28 129.0 199 44.7
Cc10_g16310 Coffea canephora HOM05D005624 ORTHO05D006896 9.0e-27 124.8 75 78.7
Cc08_g00010 Coffea canephora HOM05D005624 ORTHO05D006896 4.4e-26 122.5 75 74.7
CSS0031660 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 7.1e-24 115.2 100 57.0
Cc06_g22650 Coffea canephora HOM05D005624 ORTHO05D006896 7.8e-23 111.7 75 73.3
SEGI_14660 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 1.3e-20 104.4 60 78.3
Dinv02968 Davidia involucrata HOM05D005624 ORTHO05D006896 1.5e-13 80.9 37 97.3
Lalb_Chr05g0228961 Lupinus albus HOM05D005624 ORTHO05D006896 1.3e-09 67.8 37 81.1
Lsat_1_v5_gn_4_78441 Lactuca sativa HOM05D005624 ORTHO05D006896 4.2e-08 62.8 36 77.8
Os09g0512900 Oryza sativa ssp. japonica HOM05D005624 ORTHO05D006896 5.5e-08 62.4 36 80.6
SEGI_32969 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 1.0e-06 58.2 40 72.5
MBI11_g04264_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D000004 8.7e-06 55.1 29 86.2


User provided reference genes

Program Settings