Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 0.0e+00 1256.9 639 100.0
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 2.1e-232 809.3 644 66.3
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 5.4e-220 768.1 656 64.2
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.6e-219 766.5 666 63.7
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 3.5e-219 765.4 649 64.6
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.0e-218 763.8 650 64.2
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.2e-215 751.5 642 62.6
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 9.3e-212 740.7 656 62.7
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 2.3e-210 736.1 641 61.9
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 2.3e-210 736.1 648 63.3
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 1.5e-209 733.4 651 60.5
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 2.0e-206 723.0 641 60.8
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 5.8e-206 721.5 656 60.4
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.3e-205 720.3 641 60.8
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.7e-205 719.9 652 61.0
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.7e-205 719.9 681 59.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.2e-205 719.5 658 61.2
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.7e-203 712.6 643 61.7
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.3e-202 709.5 635 62.7
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.5e-201 706.8 651 59.9
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 4.3e-201 705.3 654 60.7
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 4.8e-200 701.8 633 62.1
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 6.2e-200 701.4 571 64.3
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 8.1e-200 701.0 646 60.1
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 5.8e-198 694.9 637 60.9
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.9e-196 689.9 641 59.6
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 3.2e-196 689.1 650 57.7
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.6e-195 686.8 641 59.1
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 6.0e-195 684.9 645 59.5
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 3.0e-194 682.6 641 58.7
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 2.5e-193 679.5 649 58.7
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 4.3e-193 678.7 641 58.5
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 3.7e-192 675.6 649 58.6
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 1.4e-191 673.7 649 57.2
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 3.1e-191 672.5 650 58.0
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.0e-191 671.0 645 57.8
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 2.6e-190 669.5 647 58.6
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.0e-189 667.5 670 56.3
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.3e-189 667.2 633 58.0
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 4.2e-188 662.1 650 54.8
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.6e-187 660.2 613 59.5
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 2.3e-186 656.4 648 56.8
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 5.1e-186 655.2 645 56.9
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 6.7e-186 654.8 649 57.5
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 6.7e-186 654.8 647 56.4
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 8.7e-186 654.4 650 57.5
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 1.1e-185 654.1 651 56.5
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 3.3e-185 652.5 647 55.5
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.6e-184 650.2 661 56.1
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.6e-184 650.2 636 56.8
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 8.2e-184 647.9 654 56.4
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.8e-183 646.7 521 62.0
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 1.8e-183 646.7 644 54.8
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 2.4e-183 646.4 686 54.2
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 2.4e-183 646.4 654 56.9
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 4.1e-183 645.6 686 54.2
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 4.1e-183 645.6 654 55.4
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 6.9e-183 644.8 648 55.9
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 9.0e-183 644.4 648 55.1
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 4.5e-182 642.1 634 55.4
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.0e-181 641.0 649 55.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.3e-181 640.6 433 73.0
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 5.0e-181 638.6 635 57.5
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 8.5e-181 637.9 655 55.1
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.9e-180 636.7 654 55.4
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.9e-180 636.7 654 55.4
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 9.3e-180 634.4 635 57.0
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 2.1e-179 633.3 662 53.8
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 2.1e-179 633.3 657 54.5
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 2.7e-179 632.9 648 55.4
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 3.6e-179 632.5 656 54.6
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.9e-179 631.3 462 65.2
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.9e-179 631.3 462 65.2
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.1e-177 627.5 637 56.2
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-177 627.1 629 55.0
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 1.5e-177 627.1 640 56.9
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.3e-176 624.0 650 54.0
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 4.8e-176 622.1 630 54.9
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 8.2e-176 621.3 537 58.8
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-175 620.9 649 53.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.4e-175 620.5 637 54.5
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 4.1e-175 619.0 658 52.7
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 3.8e-173 612.5 652 52.6
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.1e-172 610.9 553 60.2
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-172 610.9 654 52.8
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 5.5e-172 608.6 651 53.0
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 7.2e-172 608.2 656 52.9
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 5.1e-170 602.1 659 51.7
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 2.6e-169 599.7 639 54.0
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.4e-169 599.0 639 53.1
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 2.6e-166 589.7 388 71.9
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 3.2e-164 582.8 647 50.9
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 4.2e-164 582.4 516 56.4
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.5e-164 582.0 457 61.1
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 5.2e-162 575.5 636 53.3
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 9.7e-161 571.2 652 50.6
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 4.5e-158 562.4 657 48.7
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 3.8e-157 559.3 655 49.0
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 7.7e-142 508.4 350 69.7
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 4.3e-132 476.1 494 52.8
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 9.5e-132 474.9 484 50.4
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 3.7e-128 463.0 652 46.2
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 3.7e-128 463.0 349 64.2
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.7e-117 427.6 643 41.5
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 3.9e-117 426.4 422 49.3
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 4.7e-115 419.5 612 42.5
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 1.0e-109 401.7 535 41.5
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 3.0e-85 320.5 671 31.7
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 5.5e-79 299.7 518 35.7
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.1e-60 238.8 487 30.8
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 2.2e-56 224.6 416 35.1
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 4.4e-52 210.3 563 27.4
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 4.4e-28 130.6 98 63.3
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 4.4e-28 130.6 98 63.3
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 2.4e-26 124.8 98 61.2
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 7.0e-18 96.7 463 23.3


User provided reference genes

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