Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 0.0e+00 1188.7 597 100.0
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 1.8e-172 610.1 648 57.6
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 2.2e-90 337.4 312 59.0
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 4.2e-89 333.2 312 58.7
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.6e-88 331.3 327 56.3
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 2.1e-88 330.9 307 60.6
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 2.7e-88 330.5 302 61.3
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 3.5e-88 330.1 325 54.8
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 1.3e-87 328.2 332 57.2
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 5.1e-87 326.2 326 56.4
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.5e-86 324.7 311 59.2
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 5.6e-86 322.8 326 55.8
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 2.8e-85 320.5 326 55.2
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 4.8e-85 319.7 355 52.1
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 1.3e-77 295.0 299 60.2
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.5e-75 288.1 329 54.4
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 1.3e-74 285.0 309 54.7
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 4.9e-74 283.1 327 51.4
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 6.4e-74 282.7 326 51.5
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 8.4e-74 282.3 330 52.7
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 2.5e-73 280.8 309 54.4
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 3.2e-73 280.4 324 52.2
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 3.2e-73 280.4 328 50.9
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 3.2e-73 280.4 330 51.8
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 4.2e-73 280.0 324 51.9
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 5.5e-73 279.6 325 52.9
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 1.6e-72 278.1 331 52.0
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.0e-71 275.4 326 52.5
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 1.0e-71 275.4 322 49.4
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.3e-71 275.0 327 50.8
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.3e-71 275.0 327 50.5
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.3e-71 274.2 327 50.8
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 3.9e-71 273.5 327 50.8
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.1e-71 273.1 327 52.3
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 6.7e-71 272.7 327 50.2
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 1.1e-70 271.9 323 51.4
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.5e-70 271.6 326 51.2
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 9.6e-70 268.9 324 50.9
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.3e-69 268.5 320 49.1
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 1.6e-69 268.1 328 49.7
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 2.1e-69 267.7 325 48.9
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 4.8e-69 266.5 328 49.4
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 6.2e-69 266.2 306 50.3
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.4e-68 265.0 325 48.3
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 1.4e-68 265.0 324 50.6
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 2.4e-68 264.2 339 46.9
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 2.4e-68 264.2 329 49.8
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 3.1e-68 263.8 322 49.1
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 5.3e-68 263.1 310 52.6
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 9.0e-68 262.3 324 47.2
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 9.0e-68 262.3 628 36.0
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.2e-67 261.9 329 48.3
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 2.0e-67 261.2 310 51.9
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 2.0e-67 261.2 323 49.2
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.7e-66 258.1 329 49.8
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 8.4e-66 255.8 331 49.2
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 8.4e-66 255.8 326 49.7
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 1.4e-65 255.0 325 48.9
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 1.9e-65 254.6 321 50.2
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 6.0e-64 249.6 277 53.4
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 7.9e-64 249.2 358 43.6
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 1.3e-63 248.4 244 56.6
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 1.3e-63 248.4 324 48.8
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 2.3e-63 247.7 324 46.9
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 3.0e-63 247.3 294 50.3
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 5.7e-62 243.0 244 55.7
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 3.7e-61 240.4 306 47.1
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 3.1e-60 237.3 295 50.2
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 6.9e-60 236.1 355 45.1
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 1.5e-59 235.0 232 57.3
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 2.9e-58 230.7 253 55.3
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 3.8e-58 230.3 327 45.6
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 5.0e-58 229.9 323 45.8
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 4.2e-57 226.9 292 50.0
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 9.4e-57 225.7 317 47.6
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.5e-54 218.4 247 51.0
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 2.5e-54 217.6 304 48.7
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 4.3e-54 216.9 244 52.0
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 4.3e-54 216.9 319 45.1
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 1.3e-53 215.3 242 50.4
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 3.7e-53 213.8 319 44.8
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 6.3e-53 213.0 305 46.9
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 6.3e-53 213.0 298 50.0
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 1.1e-52 212.2 244 51.6
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 1.8e-52 211.5 321 45.5
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 4.1e-52 210.3 307 47.6
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 4.5e-51 206.8 285 44.2
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 3.6e-48 197.2 294 46.3
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 6.7e-47 193.0 298 44.3
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 6.3e-45 186.4 328 43.3
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 6.3e-45 186.4 232 49.1
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 8.2e-45 186.0 266 45.9
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 2.4e-44 184.5 266 45.5
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 4.1e-44 183.7 270 46.7
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 1.7e-42 178.3 301 42.5
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.8e-39 168.3 268 40.3
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 1.3e-37 162.2 328 36.9
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 1.1e-36 159.1 306 41.8
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.3e-34 152.1 189 51.9
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 1.0e-31 142.5 267 40.4
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 1.8e-31 141.7 264 39.8
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 2.3e-31 141.4 272 37.5
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 2.3e-31 141.4 279 36.2
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 4.0e-31 140.6 264 40.2
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 3.3e-30 137.5 212 45.3
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 7.5e-30 136.3 330 33.3
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 9.7e-30 136.0 281 34.5
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 1.3e-29 135.6 313 33.9
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 1.3e-29 135.6 313 33.9
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 6.3e-29 133.3 265 38.5
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 8.3e-29 132.9 336 33.3
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 8.3e-29 132.9 188 44.7
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 3.1e-28 131.0 262 37.8
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 3.5e-27 127.5 299 35.5
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 4.5e-27 127.1 273 37.0
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 7.7e-27 126.3 273 37.0
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 5.0e-26 123.6 236 40.7
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 8.5e-26 122.9 273 35.9
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 1.1e-25 122.5 273 36.6
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 1.5e-25 122.1 263 35.4
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 3.6e-24 117.5 260 35.0
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 2.3e-23 114.8 307 34.5
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 4.0e-23 114.0 243 35.4
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.7e-21 108.6 246 35.0
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 2.7e-19 101.3 188 40.4
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 4.2e-17 94.0 205 36.1
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 5.5e-17 93.6 314 30.3
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 7.5e-14 83.2 156 39.1
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 2.8e-13 81.3 235 33.2
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 3.7e-13 80.9 90 52.2
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 8.3e-13 79.7 155 40.6
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 2.4e-12 78.2 175 33.7
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 3.2e-12 77.8 85 49.4
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 2.0e-11 75.1 166 33.1
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 5.9e-11 73.6 167 33.5
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 5.6e-09 67.0 71 49.3
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 2.0e-06 58.5 62 48.4
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 2.0e-06 58.5 62 48.4
SEGI_09816 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 2.0e-06 58.5 123 34.1
BolC9t58511H Brassica oleracea HOM05D005141 ORTHO05D006250 2.6e-06 58.2 60 50.0


User provided reference genes

Program Settings