Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 3.9e-102 374.8 187 100.0
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 3.4e-98 361.7 187 94.1
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 4.5e-98 361.3 187 93.0
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 7.6e-98 360.5 187 92.5
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 7.6e-98 360.5 187 92.5
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 7.6e-98 360.5 187 92.5
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.0e-97 360.1 187 94.7
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 1.0e-97 360.1 186 94.1
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.3e-97 359.8 187 94.7
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.7e-97 359.4 187 92.0
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 91.4
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 92.0
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 92.0
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 93.0
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 93.0
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 93.0
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 93.0
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 6.5e-97 357.5 187 91.4
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 6.5e-97 357.5 187 93.0
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 1.1e-96 356.7 196 92.9
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 1.4e-96 356.3 187 93.6
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.4e-96 356.3 187 93.0
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.9e-96 355.9 187 92.5
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 92.5
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 93.0
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 91.4
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 93.0
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 92.5
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 92.0
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 92.0
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 90.9
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 91.4
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 92.5
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 90.9
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 92.0
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 93.0
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 90.4
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 92.0
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 91.4
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 91.4
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 92.5
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 91.4
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 92.5
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 2.7e-95 352.1 187 91.4
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 2.7e-95 352.1 187 91.4
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 91.4
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 91.4
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 90.9
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 4.6e-95 351.3 200 86.5
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 4.6e-95 351.3 184 92.9
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 6.0e-95 350.9 187 92.5
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 6.0e-95 350.9 186 92.5
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 7.9e-95 350.5 187 90.4
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 7.9e-95 350.5 187 91.4
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.8
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.0e-94 350.1 182 93.4
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 90.4
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 90.9
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 92.0
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 89.8
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 90.4
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 90.9
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.3
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 90.9
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.3
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.8
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 88.8
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 91.4
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 90.4
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 90.4
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 89.8
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 89.8
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 89.8
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 90.4
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 89.8
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 88.2
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 89.8
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 90.4
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 89.8
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 89.3
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.2
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 88.8
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 87.7
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 7.4e-93 344.0 201 85.6
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 89.3
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 7.4e-93 344.0 186 88.2
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 88.8
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 88.8
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 89.3
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 88.2
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.8
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.8
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.8
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.8
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.2
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 1.6e-92 342.8 186 89.8
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 87.2
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 88.2
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 88.8
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 88.2
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 6.2e-92 340.9 187 87.2
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 88.2
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 8.2e-92 340.5 206 83.0
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.1e-91 340.1 181 91.2
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 1.1e-91 340.1 193 86.5
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 87.2
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 87.7
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 2.4e-91 339.0 188 87.2
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 2.4e-91 339.0 188 87.2
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 9.0e-91 337.0 187 87.7
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 5.8e-90 334.3 203 81.3
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.3e-89 333.2 208 80.3
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.7e-89 332.8 187 86.6
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 3.8e-89 331.6 206 81.1
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 8.4e-89 330.5 187 85.0
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 1.4e-88 329.7 183 88.5
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.6e-87 326.2 241 70.5
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 1.8e-86 322.8 211 77.7
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 5.1e-86 321.2 185 83.2
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.6e-84 316.2 173 86.7
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 6.3e-84 314.3 187 79.1
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 2.4e-83 312.4 167 88.6
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.2e-82 310.1 169 87.0
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.9e-82 307.8 181 77.9
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.9e-82 307.8 181 77.9
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.1e-80 303.5 181 76.8
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 3.2e-80 302.0 181 76.2
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 7.9e-79 297.4 187 80.7
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.9e-78 295.0 187 79.1
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.5e-77 292.4 172 78.5
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 4.3e-77 291.6 187 73.3
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.7e-77 290.4 187 78.6
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 4.8e-76 288.1 186 79.0
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 6.3e-76 287.7 159 88.7
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.4e-75 285.8 182 74.7
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 5.3e-75 284.6 154 89.6
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 2.6e-74 282.3 149 93.3
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 4.5e-74 281.6 187 75.4
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 4.7e-71 271.6 148 87.2
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 3.0e-70 268.9 187 74.3
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 2.8e-68 262.3 214 61.2
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 7.0e-67 257.7 158 77.8
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 8.0e-63 244.2 187 69.0
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.1e-61 240.4 187 67.4
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 9.7e-61 237.3 173 61.3
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 2.9e-57 225.7 124 88.7
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.1e-55 219.5 127 78.7
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 6.3e-52 208.0 103 95.1
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 2.2e-49 199.5 167 55.1
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 6.5e-49 198.0 139 72.7
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 3.2e-48 195.7 98 91.8
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 4.2e-48 195.3 107 89.7
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 4.2e-48 195.3 175 55.4
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 2.3e-46 189.5 181 59.1
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.5e-45 186.8 103 83.5
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 8.3e-44 181.0 98 83.7
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.3e-36 157.1 85 89.4
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 5.2e-30 135.2 142 54.2
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 5.8e-21 105.1 68 70.6
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.7e-17 93.6 52 92.3
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 5.1e-17 92.0 52 88.5
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 1.6e-15 87.0 49 89.8
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 8.1e-15 84.7 41 97.6
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 9.9e-13 77.8 68 57.4
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 1.7e-12 77.0 45 84.4
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.9e-12 76.3 41 85.4
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.9e-12 76.3 70 62.9
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 1.9e-11 73.6 47 76.6
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.4e-11 73.2 39 82.1


User provided reference genes

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