Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032250.1 Olea europaea HOM05D003103 ORTHO05D015980 5.1e-44 180.6 88 100.0
SalBow5G1645 Salvia bowleyana HOM05D003103 ORTHO05D003999 2.9e-23 111.7 58 93.1
CSS0023497 Camellia sinensis var. sinensis HOM05D003103 ORTHO05D003999 6.5e-23 110.5 58 93.1
Migut.H00421 Erythranthe guttata HOM05D003103 ORTHO05D003999 1.1e-22 109.8 57 91.2
Nitab4.5_0002029g0060 Nicotiana tabacum HOM05D003103 ORTHO05D003999 1.1e-22 109.8 58 91.4
SalBow5G5600 Salvia bowleyana HOM05D003103 ORTHO05D003999 1.4e-22 109.4 58 91.4
SGA_v2.0_scaffold62G21520 Striga asiatica HOM05D003103 ORTHO05D003999 1.4e-22 109.4 57 91.2
vmacro17957 Vaccinium macrocarpon HOM05D003103 ORTHO05D003999 1.4e-22 109.4 59 89.8
Duzib264G0053 Durio zibethinus HOM05D003103 ORTHO05D003999 1.9e-22 109.0 56 92.9
Gohir.A12G072300 Gossypium hirsutum HOM05D003103 ORTHO05D003999 1.9e-22 109.0 56 92.9
Gohir.D12G070200 Gossypium hirsutum HOM05D003103 ORTHO05D003999 1.9e-22 109.0 56 92.9
Gorai.008G077200 Gossypium raimondii HOM05D003103 ORTHO05D003999 1.9e-22 109.0 56 92.9
Lalb_Chr05g0226491 Lupinus albus HOM05D003103 ORTHO05D003999 2.5e-22 108.6 56 92.9
Rhsim08G0099700 Rhododendron simsii HOM05D003103 ORTHO05D003999 2.5e-22 108.6 58 89.7
MSTRG.15382 Avicennia marina HOM05D003103 ORTHO05D003999 3.2e-22 108.2 58 89.7
Peaxi162Scf00450g00126 Petunia axillaris HOM05D003103 ORTHO05D003999 3.2e-22 108.2 58 87.9
Actinidia03793 Actinidia chinensis HOM05D003103 ORTHO05D003999 4.2e-22 107.8 58 89.7
Nitab4.5_0003519g0020 Nicotiana tabacum HOM05D003103 ORTHO05D003999 4.2e-22 107.8 58 89.7
Thecc.01G058700 Theobroma cacao HOM05D003103 ORTHO05D003999 4.2e-22 107.8 56 91.1
Ciclev10025298m.g Citrus clementina HOM05D003103 ORTHO05D003999 5.5e-22 107.5 56 92.9
CAN.G370.47 Capsicum annuum HOM05D003103 ORTHO05D003999 7.1e-22 107.1 58 87.9
Duzib147G0775 Durio zibethinus HOM05D003103 ORTHO05D003999 7.1e-22 107.1 56 91.1
Lsat_1_v5_gn_3_89301 Lactuca sativa HOM05D003103 ORTHO05D003999 7.1e-22 107.1 59 84.7
Solyc02g093290.3 Solanum lycopersicum HOM05D003103 ORTHO05D003999 7.1e-22 107.1 58 87.9
Sopen02g037850 Solanum pennellii HOM05D003103 ORTHO05D003999 7.1e-22 107.1 58 87.9
PGSC0003DMG400004012 Solanum tuberosum HOM05D003103 ORTHO05D003999 7.1e-22 107.1 58 87.9
Actinidia12044 Actinidia chinensis HOM05D003103 ORTHO05D003999 9.3e-22 106.7 58 87.9
MSTRG.3431 Avicennia marina HOM05D003103 ORTHO05D003999 9.3e-22 106.7 57 89.5
COL.COLO4_11442 Corchorus olitorius HOM05D003103 ORTHO05D003999 9.3e-22 106.7 56 91.1
ECA246G4532 Erigeron canadensis HOM05D003103 ORTHO05D003999 9.3e-22 106.7 57 87.7
HanXRQChr12g0381311 Helianthus annuus HOM05D003103 ORTHO05D003999 9.3e-22 106.7 59 83.1
TAR381G0597 Trochodendron aralioides HOM05D003103 ORTHO05D003999 9.3e-22 106.7 58 87.9
Zm00001eb422480 Zea mays HOM05D003103 ORTHO05D003999 9.3e-22 106.7 56 91.1
Actinidia16477 Actinidia chinensis HOM05D003103 ORTHO05D003999 1.2e-21 106.3 57 91.2
CSS0011350 Camellia sinensis var. sinensis HOM05D003103 ORTHO05D003999 1.2e-21 106.3 58 89.7
Cc07_g06120 Coffea canephora HOM05D003103 ORTHO05D003999 1.2e-21 106.3 57 89.5
Medtr4g094805 Medicago truncatula HOM05D003103 ORTHO05D003999 1.2e-21 106.3 59 86.4
arahy.Tifrunner.gnm1.ann1.TC99UD Arachis hypogaea HOM05D003103 ORTHO05D003999 1.6e-21 105.9 56 92.9
TPR.G19077 Trifolium pratense HOM05D003103 ORTHO05D003999 1.6e-21 105.9 59 86.4
CANSAT01G0334 Cannabis sativa HOM05D003103 ORTHO05D003999 2.1e-21 105.5 56 91.1
Cpa.g.sc55.133 Carica papaya HOM05D003103 ORTHO05D003999 2.1e-21 105.5 59 84.7
ECA238G1051 Erigeron canadensis HOM05D003103 ORTHO05D003999 2.1e-21 105.5 54 90.7
HanXRQChr14g0449051 Helianthus annuus HOM05D003103 ORTHO05D003999 2.7e-21 105.1 54 90.7
Lsat_1_v5_gn_2_84981 Lactuca sativa HOM05D003103 ORTHO05D003999 2.7e-21 105.1 54 88.9
unitig_899.g14947 Utricularia gibba HOM05D003103 ORTHO05D003999 2.7e-21 105.1 56 91.1
Cfa004034 Carpinus fangiana HOM05D003103 ORTHO05D003999 3.5e-21 104.8 56 92.9
Lj4C151G10 Lonicera japonica HOM05D003103 ORTHO05D003999 3.5e-21 104.8 58 86.2
Lj4g0002336 Lotus japonicus HOM05D003103 ORTHO05D003999 3.5e-21 104.8 59 84.7
Lalb_Chr16g0388671 Lupinus albus HOM05D003103 ORTHO05D003999 3.5e-21 104.8 56 91.1
MD02G1174500 Malus domestica HOM05D003103 ORTHO05D003999 3.5e-21 104.8 56 91.1
MD15G1285500 Malus domestica HOM05D003103 ORTHO05D003999 3.5e-21 104.8 56 91.1
Os04g0429800 Oryza sativa ssp. japonica HOM05D003103 ORTHO05D003999 3.5e-21 104.8 56 91.1
Psat4g086400 Pisum sativum HOM05D003103 ORTHO05D003999 3.5e-21 104.8 57 89.5
SGA_v2.0_scaffold15G07323 Striga asiatica HOM05D003103 ORTHO05D003999 3.5e-21 104.8 56 91.1
Ca_22156_v3 Cicer arietinum L. HOM05D003103 ORTHO05D003999 4.6e-21 104.4 59 84.7
FvH4_1g16212 Fragaria vesca HOM05D003103 ORTHO05D003999 4.6e-21 104.4 56 91.1
FAN23G0049 Fragaria x ananassa HOM05D003103 ORTHO05D003999 4.6e-21 104.4 56 91.1
FAN26G0572 Fragaria x ananassa HOM05D003103 ORTHO05D003999 4.6e-21 104.4 56 91.1
FAN28G1880 Fragaria x ananassa HOM05D003103 ORTHO05D003999 4.6e-21 104.4 56 91.1
Peaxi162Scf00685g00413 Petunia axillaris HOM05D003103 ORTHO05D003999 4.6e-21 104.4 57 87.7
VMungo0251G1095 Vigna mungo HOM05D003103 ORTHO05D003999 4.6e-21 104.4 54 92.6
arahy.Tifrunner.gnm1.ann1.6SC4JI Arachis hypogaea HOM05D003103 ORTHO05D003999 6.1e-21 104.0 56 91.1
Phvul.003G243000 Phaseolus vulgaris HOM05D003103 ORTHO05D003999 6.1e-21 104.0 54 90.7
arahy.Tifrunner.gnm1.ann1.556YNA Arachis hypogaea HOM05D003103 ORTHO05D003999 7.9e-21 103.6 56 91.1
Haze_15380 Corylus avellana HOM05D003103 ORTHO05D003999 7.9e-21 103.6 56 91.1
DCAR_010882 Daucus carota HOM05D003103 ORTHO05D003999 7.9e-21 103.6 58 84.5
HanXRQChr07g0187961 Helianthus annuus HOM05D003103 ORTHO05D003999 7.9e-21 103.6 54 87.0
Medtr5g017050 Medicago truncatula HOM05D003103 ORTHO05D003999 7.9e-21 103.6 56 91.1
Nitab4.5_0002646g0010 Nicotiana tabacum HOM05D003103 ORTHO05D003999 7.9e-21 103.6 57 86.0
Aqoxy6G01280 Aquilegia oxysepala HOM05D003103 ORTHO05D003999 1.0e-20 103.2 54 90.7
Eucgr.I00907 Eucalyptus grandis HOM05D003103 ORTHO05D003999 1.0e-20 103.2 56 91.1
Manes.12G104000 Manihot esculenta HOM05D003103 ORTHO05D003999 1.0e-20 103.2 56 89.3
Nn1g04803 Nelumbo nucifera HOM05D003103 ORTHO05D003999 1.0e-20 103.2 56 87.5
PSO541G2306 Papaver somniferum HOM05D003103 ORTHO05D003999 1.0e-20 103.2 56 91.1
PSO675G0324 Papaver somniferum HOM05D003103 ORTHO05D003999 1.0e-20 103.2 56 91.1
Prupe.7G131500 Prunus persica HOM05D003103 ORTHO05D003999 1.0e-20 103.2 56 89.3
CAN.G11.2 Capsicum annuum HOM05D003103 ORTHO05D003999 1.3e-20 102.8 57 86.0
Nitab4.5_0001064g0060 Nicotiana tabacum HOM05D003103 ORTHO05D003999 1.3e-20 102.8 57 86.0
Potri.005G139800 Populus trichocarpa HOM05D003103 ORTHO05D003999 1.3e-20 102.8 56 91.1
Sabra05G0111200 Salix brachista HOM05D003103 ORTHO05D003999 1.3e-20 102.8 56 91.1
Sabra07G0040400 Salix brachista HOM05D003103 ORTHO05D003999 1.3e-20 102.8 56 91.1
Atru.chr3.305 Acer truncatum HOM05D003103 ORTHO05D003999 1.8e-20 102.4 56 87.5
CiPaw.01G016600 Carya illinoinensis HOM05D003103 ORTHO05D003999 1.8e-20 102.4 56 87.5
RcHm_v2.0_Chr2g0105921 Rosa chinensis HOM05D003103 ORTHO05D003999 1.8e-20 102.4 56 89.3
Sed0020253 Sechium edule HOM05D003103 ORTHO05D003999 1.8e-20 102.4 56 89.3
Sed0023462 Sechium edule HOM05D003103 ORTHO05D003999 1.8e-20 102.4 56 89.3
GSVIVG01022112001 Vitis vinifera HOM05D003103 ORTHO05D003999 1.8e-20 102.4 54 90.7
Glyma.05G094000 Glycine max HOM05D003103 ORTHO05D003999 2.3e-20 102.1 54 90.7
Glyma.17G172500 Glycine max HOM05D003103 ORTHO05D003999 2.3e-20 102.1 54 90.7
PGR102G2176 Punica granatum HOM05D003103 ORTHO05D003999 2.3e-20 102.1 57 86.0
TWI09G1566 Tripterygium wilfordii HOM05D003103 ORTHO05D003999 2.3e-20 102.1 54 90.7
Gohir.D11G200400 Gossypium hirsutum HOM05D003103 ORTHO05D003999 3.0e-20 101.7 56 87.5
Gorai.007G214700 Gossypium raimondii HOM05D003103 ORTHO05D003999 3.0e-20 101.7 56 87.5
QL06p040980 Quercus lobata HOM05D003103 ORTHO05D003999 3.0e-20 101.7 54 90.7
HPP92_009260 Vanilla planifolia HOM05D003103 ORTHO05D003999 3.0e-20 101.7 56 85.7
MELO3C020858.2 Cucumis melo HOM05D003103 ORTHO05D003999 3.9e-20 101.3 56 87.5
CsaV3_2G016480 Cucumis sativus L. HOM05D003103 ORTHO05D003999 3.9e-20 101.3 56 87.5
Gohir.A11G193300 Gossypium hirsutum HOM05D003103 ORTHO05D003999 3.9e-20 101.3 56 87.5
AT4G36940 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 5.1e-20 100.9 56 87.5
arahy.Tifrunner.gnm1.ann1.Q9CK1R Arachis hypogaea HOM05D003103 ORTHO05D003999 5.1e-20 100.9 56 85.7
arahy.Tifrunner.gnm1.ann1.WH2MYH Arachis hypogaea HOM05D003103 ORTHO05D003999 5.1e-20 100.9 56 85.7
Carub.0007s0312 Capsella rubella HOM05D003103 ORTHO05D003999 5.1e-20 100.9 56 87.5
Ca_24758_v3 Cicer arietinum L. HOM05D003103 ORTHO05D003999 5.1e-20 100.9 54 90.7
ClCG02G012340 Citrullus lanatus HOM05D003103 ORTHO05D003999 5.1e-20 100.9 56 87.5
Sopen03g008560 Solanum pennellii HOM05D003103 ORTHO05D003999 6.7e-20 100.5 57 84.2
Ah.03g145520 Amaranthus hybridus HOM05D003103 ORTHO05D003999 8.7e-20 100.1 59 83.1
BcaC07g40987 Brassica carinata HOM05D003103 ORTHO05D003999 8.7e-20 100.1 56 87.5
A09p56930 Brassica napus HOM05D003103 ORTHO05D003999 8.7e-20 100.1 56 87.5
C08p39890 Brassica napus HOM05D003103 ORTHO05D003999 8.7e-20 100.1 56 87.5
BolC8t51562H Brassica oleracea HOM05D003103 ORTHO05D003999 8.7e-20 100.1 56 87.5
BraA09t41085Z Brassica rapa HOM05D003103 ORTHO05D003999 8.7e-20 100.1 56 87.5
Glyma.01G187500 Glycine max HOM05D003103 ORTHO05D003999 8.7e-20 100.1 56 89.3
Hund13545 Selenicereus undatus HOM05D003103 ORTHO05D003999 8.7e-20 100.1 57 86.0
Solyc03g044430.3 Solanum lycopersicum HOM05D003103 ORTHO05D003999 8.7e-20 100.1 57 84.2
TPR.G26868 Trifolium pratense HOM05D003103 ORTHO05D003999 8.7e-20 100.1 56 85.7
AL7G13700 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 1.1e-19 99.8 56 85.7
Thhalv10024704m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 1.1e-19 99.8 56 85.7
Psat2g166720 Pisum sativum HOM05D003103 ORTHO05D003999 1.1e-19 99.8 56 85.7
TWI73G1128 Tripterygium wilfordii HOM05D003103 ORTHO05D003999 1.5e-19 99.4 54 87.0
AagrBONN_evm.TU.Sc2ySwM_344.1320 Anthoceros agrestis HOM05D003103 ORTHO05D003999 1.9e-19 99.0 56 87.5
AL4G13330 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 1.9e-19 99.0 56 85.7
AT2G23420 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 1.9e-19 99.0 56 85.7
CARHR293030 Cardamine hirsuta HOM05D003103 ORTHO05D003999 1.9e-19 99.0 56 85.7
AUR62001914 Chenopodium quinoa HOM05D003103 ORTHO05D003999 1.9e-19 99.0 59 83.1
AUR62003895 Chenopodium quinoa HOM05D003103 ORTHO05D003999 1.9e-19 99.0 59 83.1
Potri.007G045400 Populus trichocarpa HOM05D003103 ORTHO05D003999 1.9e-19 99.0 56 87.5
THA.LOC104819846 Tarenaya hassleriana HOM05D003103 ORTHO05D003999 1.9e-19 99.0 56 87.5
Zm00001eb063870 Zea mays HOM05D003103 ORTHO05D003999 1.9e-19 99.0 56 83.9
Carub.0004s0262 Capsella rubella HOM05D003103 ORTHO05D003999 2.5e-19 98.6 56 85.7
BcaNung05429 Brassica carinata HOM05D003103 ORTHO05D003999 3.3e-19 98.2 56 85.7
A03p64960 Brassica napus HOM05D003103 ORTHO05D003999 3.3e-19 98.2 56 85.7
C07p62250 Brassica napus HOM05D003103 ORTHO05D003999 3.3e-19 98.2 56 85.7
BolC7t46641H Brassica oleracea HOM05D003103 ORTHO05D003999 3.3e-19 98.2 56 85.7
BraA03t15555Z Brassica rapa HOM05D003103 ORTHO05D003999 3.3e-19 98.2 56 85.7
HPP92_025020 Vanilla planifolia HOM05D003103 ORTHO05D003999 3.3e-19 98.2 56 85.7
HPP92_025048 Vanilla planifolia HOM05D003103 ORTHO05D003999 3.3e-19 98.2 56 85.7
arahy.Tifrunner.gnm1.ann1.HU6XZL Arachis hypogaea HOM05D003103 ORTHO05D015980 4.3e-19 97.8 56 82.1
CARHR245570 Cardamine hirsuta HOM05D003103 ORTHO05D003999 4.3e-19 97.8 56 85.7
RcHm_v2.0_Chr7g0236011 Rosa chinensis HOM05D003103 ORTHO05D003999 4.3e-19 97.8 57 87.7
Thhalv10000109m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 5.7e-19 97.4 56 85.7
Sp4g02410 Schrenkiella parvula HOM05D003103 ORTHO05D003999 5.7e-19 97.4 56 85.7
Sp7g34830 Schrenkiella parvula HOM05D003103 ORTHO05D003999 7.4e-19 97.1 56 85.7
Aa31LG6G14040 Aethionema arabicum HOM05D003103 ORTHO05D003999 9.7e-19 96.7 56 83.9
Aa31LG7G13580 Aethionema arabicum HOM05D003103 ORTHO05D003999 1.6e-18 95.9 56 83.9
ATR0584G122 Amborella trichopoda HOM05D003103 ORTHO05D003999 1.6e-18 95.9 54 85.2
Sc03g0001680 Simmondsia chinensis HOM05D003103 ORTHO05D003999 1.6e-18 95.9 51 90.2
EL10Ac6g15729 Beta vulgaris HOM05D003103 ORTHO05D003999 2.2e-18 95.5 66 75.8
Os03g0837300 Oryza sativa ssp. japonica HOM05D003103 ORTHO05D003999 2.8e-18 95.1 56 82.1
SMO358G0676 Selaginella moellendorffii HOM05D003103 ORTHO05D003999 2.8e-18 95.1 59 78.0
Hund16344 Selenicereus undatus HOM05D003103 ORTHO05D003999 3.7e-18 94.7 54 85.2
SEGI_29401 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 6.3e-18 94.0 56 80.4
HanXRQChr16g0531001 Helianthus annuus HOM05D003103 ORTHO05D003999 1.1e-17 93.2 55 81.8
Phvul.002G017800 Phaseolus vulgaris HOM05D003103 ORTHO05D003999 1.8e-17 92.4 56 80.4
RcHm_v2.0_Chr1g0342971 Rosa chinensis HOM05D003103 ORTHO05D003999 2.4e-17 92.0 56 85.7
VMungo1215G3025 Vigna mungo HOM05D003103 ORTHO05D003999 2.4e-17 92.0 56 80.4
Mapoly0013s0004 Marchantia polymorpha HOM05D003103 ORTHO05D003999 1.2e-16 89.7 52 82.7
Mapoly0010s0215 Marchantia polymorpha HOM05D003103 ORTHO05D003999 3.4e-16 88.2 52 78.8
Pp3c24_5980 Physcomitrium patens HOM05D003103 ORTHO05D003999 3.4e-16 88.2 52 82.7
SMO143G0022 Selaginella moellendorffii HOM05D003103 ORTHO05D003999 4.5e-16 87.8 50 84.0
PRCOL_00006024 Prasinoderma coloniale HOM05D003103 ORTHO05D003999 5.0e-15 84.3 50 80.0
MCO01G563 Micromonas commoda HOM05D003103 ORTHO05D003999 1.4e-14 82.8 52 76.9
Lj7C70G24 Lonicera japonica HOM05D003103 ORTHO05D003999 6.3e-10 67.4 37 89.2
arahy.Tifrunner.gnm1.ann1.LT9345 Arachis hypogaea HOM05D003103 ORTHO05D003999 4.1e-09 64.7 36 83.3
arahy.Tifrunner.gnm1.ann1.K2RNYS Arachis hypogaea HOM05D003103 ORTHO05D003999 9.1e-09 63.5 36 80.6
Lsat_1_v5_gn_3_95040 Lactuca sativa HOM05D003103 ORTHO05D230134 1.5e-08 62.8 39 76.9
Haze_26099 Corylus avellana HOM05D003103 ORTHO05D003999 2.6e-08 62.0 50 58.0
Dinv30000 Davidia involucrata HOM05D003103 ORTHO05D003999 1.9e-06 55.8 58 55.2


User provided reference genes

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