Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032191.1 Olea europaea HOM05D001907 ORTHO05D002387 4.7e-31 137.1 64 100.0
Oeu022503.1 Olea europaea HOM05D001907 ORTHO05D002387 4.4e-13 77.4 44 84.1
Oeu042583.1 Olea europaea HOM05D001907 ORTHO05D002387 5.8e-13 77.0 44 84.1
MSTRG.8803 Avicennia marina HOM05D001907 ORTHO05D002387 3.9e-09 64.3 44 68.2
CDE01G0029 Ceratophyllum demersum HOM05D001907 ORTHO05D002387 5.0e-09 63.9 44 63.6
Migut.F00433 Erythranthe guttata HOM05D001907 ORTHO05D002387 6.6e-09 63.5 44 68.2
Nn4g26408 Nelumbo nucifera HOM05D001907 ORTHO05D002387 8.6e-09 63.2 44 65.9
Lj1A984T84 Lonicera japonica HOM05D001907 ORTHO05D002387 2.5e-08 61.6 44 65.9
Aqoxy7G00628 Aquilegia oxysepala HOM05D001907 ORTHO05D002387 4.3e-08 60.8 44 61.4
Cc02_g03910 Coffea canephora HOM05D001907 ORTHO05D002387 4.3e-08 60.8 44 59.1
Sabra07G0000500 Salix brachista HOM05D001663 ORTHO05D003186 4.3e-08 60.8 50 60.0
Rhsim11G0052300 Rhododendron simsii HOM05D001907 ORTHO05D002387 5.6e-08 60.5 44 65.9
Lsat_1_v5_gn_9_52620 Lactuca sativa HOM05D001907 ORTHO05D002387 7.3e-08 60.1 44 61.4
SalBow4G2192 Salvia bowleyana HOM05D001907 ORTHO05D002387 9.5e-08 59.7 43 62.8
SalBow4G3260 Salvia bowleyana HOM05D001907 ORTHO05D002387 9.5e-08 59.7 43 62.8
ECA232G1417 Erigeron canadensis HOM05D001907 ORTHO05D002387 1.2e-07 59.3 44 61.4
HanXRQChr15g0486171 Helianthus annuus HOM05D001907 ORTHO05D002387 1.2e-07 59.3 44 61.4
Rhsim03G0171200 Rhododendron simsii HOM05D001907 ORTHO05D002387 1.2e-07 59.3 45 60.0
ATR0810G174 Amborella trichopoda HOM05D001907 ORTHO05D002387 2.1e-07 58.5 44 59.1
TAR374G0814 Trochodendron aralioides HOM05D001907 ORTHO05D002387 2.1e-07 58.5 44 63.6
HanXRQChr16g0512681 Helianthus annuus HOM05D001907 ORTHO05D002387 2.8e-07 58.2 44 56.8
Potri.007G000500 Populus trichocarpa HOM05D001907 ORTHO05D002387 3.6e-07 57.8 43 62.8
GSVIVG01038075001 Vitis vinifera HOM05D001907 ORTHO05D002387 3.6e-07 57.8 44 59.1
CSS0034181 Camellia sinensis var. sinensis HOM05D001907 ORTHO05D002387 4.7e-07 57.4 40 65.0
Hma1.2p1_3219F.1_g334070 Hydrangea macrophylla HOM05D001907 ORTHO05D002387 4.7e-07 57.4 40 65.0
Lalb_Chr01g0000061 Lupinus albus HOM05D001907 ORTHO05D002387 4.7e-07 57.4 44 59.1
Peaxi162Scf01372g00046 Petunia axillaris HOM05D001907 ORTHO05D002387 4.7e-07 57.4 44 59.1
Dinv43711 Davidia involucrata HOM05D001907 ORTHO05D002387 8.1e-07 56.6 44 63.6
Lsat_1_v5_gn_4_43261 Lactuca sativa HOM05D001907 ORTHO05D002387 8.1e-07 56.6 44 63.6
SGA_v2.0_scaffold2G01140 Striga asiatica HOM05D001907 ORTHO05D002387 8.1e-07 56.6 44 59.1
vmacro06769 Vaccinium macrocarpon HOM05D001907 ORTHO05D002387 8.1e-07 56.6 44 59.1
MBI03_g16542_MAGBIO Magnolia biondii HOM05D001907 ORTHO05D002387 1.1e-06 56.2 44 61.4
Phvul.011G000800 Phaseolus vulgaris HOM05D001907 ORTHO05D002387 1.1e-06 56.2 44 56.8
TAR629G1911 Trochodendron aralioides HOM05D001907 ORTHO05D002387 1.1e-06 56.2 44 59.1
VMungo0540G2205 Vigna mungo HOM05D001907 ORTHO05D002387 1.1e-06 56.2 44 56.8
DCAR_020207 Daucus carota HOM05D001907 ORTHO05D002387 1.4e-06 55.8 42 59.5
PGSC0003DMG400031007 Solanum tuberosum HOM05D001907 ORTHO05D002387 1.4e-06 55.8 44 61.4
Aqoxy4G01542 Aquilegia oxysepala HOM05D001907 ORTHO05D002387 1.8e-06 55.5 45 60.0
Nitab4.5_0007960g0020 Nicotiana tabacum HOM05D001907 ORTHO05D002387 1.8e-06 55.5 44 56.8
CSS0043271 Camellia sinensis var. sinensis HOM05D001907 ORTHO05D002387 2.3e-06 55.1 44 61.4
Nitab4.5_0000072g0450 Nicotiana tabacum HOM05D001907 ORTHO05D002387 2.3e-06 55.1 44 56.8
Ciclev10019343m.g Citrus clementina HOM05D001907 ORTHO05D002387 3.1e-06 54.7 44 59.1
Dinv32376 Davidia involucrata HOM05D001907 ORTHO05D002387 3.1e-06 54.7 44 59.1
SGA_v2.0_scaffold2G01125 Striga asiatica HOM05D001907 ORTHO05D002387 3.1e-06 54.7 44 56.8
vmacro04236 Vaccinium macrocarpon HOM05D001907 ORTHO05D002387 3.1e-06 54.7 40 67.5
arahy.Tifrunner.gnm1.ann1.8W7DG1 Arachis hypogaea HOM05D001907 ORTHO05D002387 4.0e-06 54.3 44 54.5
arahy.Tifrunner.gnm1.ann1.L8ZILJ Arachis hypogaea HOM05D001907 ORTHO05D002387 4.0e-06 54.3 44 54.5
TWI77G0638 Tripterygium wilfordii HOM05D001907 ORTHO05D002387 4.0e-06 54.3 44 59.1
Eucgr.E01423 Eucalyptus grandis HOM05D001907 ORTHO05D002387 5.2e-06 53.9 44 61.4
Manes.02G213700 Manihot esculenta HOM05D001907 ORTHO05D002387 5.2e-06 53.9 44 59.1
Psat7g226200 Pisum sativum HOM05D001907 ORTHO05D002387 5.2e-06 53.9 44 54.5
PGR142G0970 Punica granatum HOM05D001907 ORTHO05D002387 5.2e-06 53.9 44 59.1
Solyc03g007170.3 Solanum lycopersicum HOM05D001907 ORTHO05D002387 5.2e-06 53.9 44 59.1
Sopen03g003150 Solanum pennellii HOM05D001907 ORTHO05D002387 5.2e-06 53.9 44 59.1
arahy.Tifrunner.gnm1.ann1.DY30JI Arachis hypogaea HOM05D001907 ORTHO05D002387 6.8e-06 53.5 44 54.5
CSS0047059 Camellia sinensis var. sinensis HOM05D001907 ORTHO05D002387 6.8e-06 53.5 40 65.0
TPR.G34167 Trifolium pratense HOM05D001907 ORTHO05D002387 6.8e-06 53.5 44 52.3


User provided reference genes

Program Settings