Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032161.1 Olea europaea HOM05D005306 ORTHO05D006158 1.7e-199 699.1 355 100.0
Oeu032163.1 Olea europaea HOM05D005306 ORTHO05D006158 1.7e-199 699.1 355 100.0
SalBow3G4455 Salvia bowleyana HOM05D005306 ORTHO05D006158 4.8e-69 265.8 454 40.5
Migut.H02371 Erythranthe guttata HOM05D005306 ORTHO05D006158 2.7e-67 260.0 415 44.1
Cc07_g15400 Coffea canephora HOM05D005306 ORTHO05D006158 2.8e-64 250.0 375 43.7
Actinidia36600 Actinidia chinensis HOM05D005306 ORTHO05D006158 3.7e-61 239.6 398 40.5
MSTRG.2558 Avicennia marina HOM05D005306 ORTHO05D006158 8.3e-61 238.4 507 37.3
Dinv16302 Davidia involucrata HOM05D005306 ORTHO05D006158 3.5e-59 233.0 381 41.2
Dinv21926 Davidia involucrata HOM05D005306 ORTHO05D006158 1.0e-58 231.5 404 39.4
SGA_v2.0_scaffold47G17761 Striga asiatica HOM05D005306 ORTHO05D006158 2.9e-58 229.9 400 41.0
MSTRG.23333 Avicennia marina HOM05D005306 ORTHO05D006158 3.3e-57 226.5 499 34.7
PGSC0003DMG400020626 Solanum tuberosum HOM05D005306 ORTHO05D006158 1.0e-55 221.5 366 40.7
CSS0034809 Camellia sinensis var. sinensis HOM05D005306 ORTHO05D006158 1.8e-55 220.7 401 40.1
Sopen04g024710 Solanum pennellii HOM05D005306 ORTHO05D006158 1.2e-54 218.0 363 39.9
Peaxi162Scf00422g00025 Petunia axillaris HOM05D005306 ORTHO05D006158 5.8e-54 215.7 366 39.3
Lj4A885T20 Lonicera japonica HOM05D005306 ORTHO05D006158 2.9e-53 213.4 384 40.6
Solyc04g054900.3 Solanum lycopersicum HOM05D005306 ORTHO05D006158 4.9e-53 212.6 364 39.0
CAN.G113.1 Capsicum annuum HOM05D005306 ORTHO05D006158 2.1e-48 197.2 369 38.8
Nitab4.5_0004120g0030 Nicotiana tabacum HOM05D005306 ORTHO05D006158 1.9e-44 184.1 351 39.6
CiPaw.03G140300 Carya illinoinensis HOM05D005306 ORTHO05D006158 3.9e-42 176.4 337 37.1
Manes.12G136900 Manihot esculenta HOM05D005306 ORTHO05D006158 5.1e-42 176.0 378 34.9
Nitab4.5_0000104g0330 Nicotiana tabacum HOM05D005306 ORTHO05D006158 1.1e-41 174.9 355 38.3
GSVIVG01004251001 Vitis vinifera HOM05D005306 ORTHO05D006158 1.1e-41 174.9 299 37.8
QL06p049976 Quercus lobata HOM05D005306 ORTHO05D006158 7.3e-41 172.2 369 33.3
Duzib147G0288 Durio zibethinus HOM05D005306 ORTHO05D006158 2.1e-40 170.6 175 53.7
CsaV3_6G045590 Cucumis sativus L. HOM05D005306 ORTHO05D006158 4.7e-40 169.5 205 48.8
Ciclev10025982m.g Citrus clementina HOM05D005306 ORTHO05D006158 8.1e-40 168.7 363 34.4
MELO3C007770.2 Cucumis melo HOM05D005306 ORTHO05D006158 1.8e-39 167.5 204 49.0
TAR625G0717 Trochodendron aralioides HOM05D005306 ORTHO05D006158 3.1e-39 166.8 399 35.8
ClCG01G018910 Citrullus lanatus HOM05D005306 ORTHO05D006158 6.8e-39 165.6 164 56.1
QL04p017893 Quercus lobata HOM05D005306 ORTHO05D006158 6.8e-39 165.6 361 35.7
Thecc.01G104400 Theobroma cacao HOM05D005306 ORTHO05D006158 6.8e-39 165.6 175 52.0
DCAR_014236 Daucus carota HOM05D005306 ORTHO05D006158 2.6e-38 163.7 346 40.5
TWI77G0207 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 3.4e-38 163.3 369 34.7
CiPaw.04G097600 Carya illinoinensis HOM05D005306 ORTHO05D006158 4.4e-38 162.9 394 33.2
Gohir.A11G052900 Gossypium hirsutum HOM05D005306 ORTHO05D006158 5.8e-38 162.5 353 35.4
Atru.chr4.126 Acer truncatum HOM05D005306 ORTHO05D006158 9.9e-38 161.8 380 35.0
ECA232G0837 Erigeron canadensis HOM05D005306 ORTHO05D006158 9.9e-38 161.8 218 46.3
TWI53G1353 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 1.3e-37 161.4 359 35.4
vmacro12947 Vaccinium macrocarpon HOM05D005306 ORTHO05D006158 4.9e-37 159.5 368 35.9
Cfa002685 Carpinus fangiana HOM05D005306 ORTHO05D006158 4.1e-36 156.4 397 31.7
Sed0001570 Sechium edule HOM05D005306 ORTHO05D006158 4.1e-36 156.4 207 48.8
Potri.007G090500 Populus trichocarpa HOM05D005306 ORTHO05D006158 5.4e-36 156.0 201 45.8
Haze_24956 Corylus avellana HOM05D005306 ORTHO05D006158 7.1e-36 155.6 412 30.6
Gohir.D12G096600 Gossypium hirsutum HOM05D005306 ORTHO05D006158 7.1e-36 155.6 206 45.1
Gorai.008G104700 Gossypium raimondii HOM05D005306 ORTHO05D006158 7.1e-36 155.6 206 45.1
Gorai.007G061500 Gossypium raimondii HOM05D005306 ORTHO05D006158 2.7e-35 153.7 226 43.4
Sabra07G0074200 Salix brachista HOM05D005306 ORTHO05D006158 4.6e-35 152.9 205 44.4
AUR62002025 Chenopodium quinoa HOM05D005306 ORTHO05D006158 3.9e-34 149.8 361 32.4
COL.COLO4_09939 Corchorus olitorius HOM05D005306 ORTHO05D006158 3.9e-34 149.8 205 42.0
Gohir.A12G079125 Gossypium hirsutum HOM05D005306 ORTHO05D006158 5.1e-34 149.4 320 33.8
Lsat_1_v5_gn_4_141700 Lactuca sativa HOM05D005306 ORTHO05D006158 5.6e-33 146.0 349 36.1
TAR381G0610 Trochodendron aralioides HOM05D005306 ORTHO05D006158 9.6e-33 145.2 307 35.2
THA.LOC104819305 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 2.8e-32 143.7 378 32.5
SGA_v2.0_scaffold34G13602 Striga asiatica HOM05D005306 ORTHO05D006158 3.6e-32 143.3 411 33.3
Cpa.g.sc20.237 Carica papaya HOM05D005306 ORTHO05D006158 6.2e-32 142.5 382 33.8
HanXRQChr15g0484181 Helianthus annuus HOM05D005306 ORTHO05D006158 1.8e-31 141.0 382 33.0
Hund13638 Selenicereus undatus HOM05D005306 ORTHO05D006158 1.8e-31 141.0 204 42.2
arahy.Tifrunner.gnm1.ann1.U0X1YR Arachis hypogaea HOM05D005306 ORTHO05D006158 4.0e-31 139.8 188 45.2
Ah.02g122180 Amaranthus hybridus HOM05D005306 ORTHO05D006158 5.2e-31 139.4 357 34.2
THA.LOC104818490 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 5.2e-31 139.4 198 44.4
Potri.005G077400 Populus trichocarpa HOM05D005306 ORTHO05D006158 6.8e-31 139.0 319 33.2
AUR62003775 Chenopodium quinoa HOM05D005306 ORTHO05D006158 1.2e-30 138.3 371 32.9
MD01G1027000 Malus domestica HOM05D005306 ORTHO05D006158 1.2e-30 138.3 405 30.9
CANSAT01G2249 Cannabis sativa HOM05D005306 ORTHO05D006158 1.5e-30 137.9 212 43.9
CARHR203180 Cardamine hirsuta HOM05D005306 ORTHO05D006158 2.0e-30 137.5 153 47.7
BraA03t09786Z Brassica rapa HOM05D005306 ORTHO05D006158 4.4e-30 136.3 174 47.7
C03p04880 Brassica napus HOM05D005306 ORTHO05D006158 7.6e-30 135.6 212 43.4
BolC3t13020H Brassica oleracea HOM05D005306 ORTHO05D006158 7.6e-30 135.6 212 43.4
Gohir.D11G056300 Gossypium hirsutum HOM05D005306 ORTHO05D006158 7.6e-30 135.6 198 44.9
Lsat_1_v5_gn_5_43440 Lactuca sativa HOM05D005306 ORTHO05D006158 7.6e-30 135.6 357 35.0
arahy.Tifrunner.gnm1.ann1.H9PZRL Arachis hypogaea HOM05D005306 ORTHO05D006158 9.9e-30 135.2 209 43.5
Thhalv10014214m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 1.3e-29 134.8 211 42.2
PSO210G6319 Papaver somniferum HOM05D005306 ORTHO05D006158 1.3e-29 134.8 172 44.2
Carub.0006s0857 Capsella rubella HOM05D005306 ORTHO05D006158 2.9e-29 133.7 143 50.3
Sp6g33290 Schrenkiella parvula HOM05D005306 ORTHO05D006158 2.9e-29 133.7 257 37.0
Prupe.6G182000 Prunus persica HOM05D005306 ORTHO05D006158 4.9e-29 132.9 386 31.6
A03p04410 Brassica napus HOM05D005306 ORTHO05D006158 6.4e-29 132.5 209 41.6
Eucgr.H04811 Eucalyptus grandis HOM05D005306 ORTHO05D006158 1.4e-28 131.3 389 31.1
Lalb_Chr07g0185101 Lupinus albus HOM05D005306 ORTHO05D006158 3.2e-28 130.2 151 45.7
Aa31LG1G16850 Aethionema arabicum HOM05D005306 ORTHO05D006158 4.2e-28 129.8 208 43.3
Lalb_Chr13g0296051 Lupinus albus HOM05D005306 ORTHO05D006158 5.4e-28 129.4 151 47.0
Medtr8g090365 Medicago truncatula HOM05D005306 ORTHO05D006158 1.2e-27 128.3 177 44.6
Thhalv10004547m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 3.5e-27 126.7 217 40.6
Psat7g054080 Pisum sativum HOM05D005306 ORTHO05D006158 4.6e-27 126.3 270 35.9
Phvul.002G254400 Phaseolus vulgaris HOM05D005306 ORTHO05D006158 1.0e-26 125.2 186 43.0
BraA06t26127Z Brassica rapa HOM05D005306 ORTHO05D006158 1.3e-26 124.8 154 42.2
VMungo0251G2777 Vigna mungo HOM05D005306 ORTHO05D006158 1.3e-26 124.8 174 43.7
Ca_17725_v3 Cicer arietinum L. HOM05D005306 ORTHO05D006158 2.3e-26 124.0 219 39.7
MD15G1327000 Malus domestica HOM05D005306 ORTHO05D006158 3.0e-26 123.6 158 48.1
Nn1g05302 Nelumbo nucifera HOM05D005306 ORTHO05D006158 5.1e-26 122.9 389 29.6
A06p31940 Brassica napus HOM05D005306 ORTHO05D006158 1.1e-25 121.7 154 41.6
Aqoxy6G00585 Aquilegia oxysepala HOM05D005306 ORTHO05D006158 3.3e-25 120.2 370 30.0
Nn5g29063 Nelumbo nucifera HOM05D005306 ORTHO05D006158 3.3e-25 120.2 372 30.1
AL6G20570 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 7.3e-25 119.0 153 44.4
AT5G10110 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 3.6e-24 116.7 143 44.8
BcaC01g02741 Brassica carinata HOM05D005306 ORTHO05D006158 3.6e-24 116.7 281 30.2
C03p61010 Brassica napus HOM05D005306 ORTHO05D006158 3.6e-24 116.7 281 30.2
BolC3t18363H Brassica oleracea HOM05D005306 ORTHO05D006158 3.6e-24 116.7 281 30.2
Carub.0008s2596 Capsella rubella HOM05D005306 ORTHO05D006158 8.1e-24 115.5 228 36.8
PGR102G1853 Punica granatum HOM05D005306 ORTHO05D006158 2.4e-23 114.0 131 47.3
AT5G65120 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 4.0e-23 113.2 183 38.8
BcaB02g09863 Brassica carinata HOM05D005306 ORTHO05D006158 5.3e-23 112.8 248 32.3
Lj4g0005197 Lotus japonicus HOM05D005306 ORTHO05D006158 5.3e-23 112.8 130 46.9
AL8G42620 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 6.9e-23 112.5 315 33.3
MBI05_g34472_MAGBIO Magnolia biondii HOM05D005306 ORTHO05D006158 6.9e-23 112.5 407 29.2
RcHm_v2.0_Chr2g0115081 Rosa chinensis HOM05D005306 ORTHO05D006158 6.9e-23 112.5 380 30.0
EL10Ac6g15084 Beta vulgaris HOM05D005306 ORTHO05D006158 1.2e-22 111.7 376 30.1
Sp2g28200 Schrenkiella parvula HOM05D005306 ORTHO05D006158 1.5e-22 111.3 216 35.6
TPR.G2173 Trifolium pratense HOM05D005306 ORTHO05D006158 2.6e-22 110.5 276 33.3
FAN28G0785 Fragaria x ananassa HOM05D005306 ORTHO05D006158 5.8e-22 109.4 372 30.4
FAN23G1139 Fragaria x ananassa HOM05D005306 ORTHO05D006158 7.6e-22 109.0 367 29.7
FAN26G1901 Fragaria x ananassa HOM05D005306 ORTHO05D006158 9.9e-22 108.6 366 30.3
unitig_27.g25362 Utricularia gibba HOM05D033148 ORTHO05D006158 2.2e-21 107.5 246 36.2
CARHR279030 Cardamine hirsuta HOM05D005306 ORTHO05D006158 4.2e-20 103.2 190 37.4
FvH4_1g21240 Fragaria vesca HOM05D005306 ORTHO05D006158 5.4e-20 102.8 383 29.2
Sed0017418 Sechium edule HOM05D005306 ORTHO05D006158 5.4e-20 102.8 180 42.8
TWI74G0266 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 5.4e-20 102.8 183 38.3
Os02g0752300 Oryza sativa ssp. japonica HOM05D005306 ORTHO05D006158 9.3e-20 102.1 117 45.3
BcaC04g23269 Brassica carinata HOM05D005306 ORTHO05D006158 4.6e-19 99.8 112 46.4
Aa31LG3G17030 Aethionema arabicum HOM05D005306 ORTHO05D006158 3.9e-18 96.7 262 30.9
C09p10370 Brassica napus HOM05D005306 ORTHO05D006158 2.5e-17 94.0 242 34.7
BolC9t53937H Brassica oleracea HOM05D005306 ORTHO05D006158 2.5e-17 94.0 242 34.7
BraA09t36544Z Brassica rapa HOM05D005306 ORTHO05D006158 3.3e-17 93.6 205 34.1
BcaB04g20004 Brassica carinata HOM05D005306 ORTHO05D006158 5.6e-17 92.8 222 33.8
FAN19G0499 Fragaria x ananassa HOM05D005306 ORTHO05D006158 6.2e-16 89.4 354 29.1
Zm00001eb194230 Zea mays HOM05D005306 ORTHO05D006158 8.1e-16 89.0 118 41.5
Sc16g0005560 Simmondsia chinensis HOM05D005306 ORTHO05D006158 2.6e-14 84.0 59 62.7
PSO447G0179 Papaver somniferum HOM05D005306 ORTHO05D006158 7.6e-14 82.4 94 46.8
Ah.03g142470 Amaranthus hybridus HOM05D005306 ORTHO05D006158 1.3e-13 81.6 286 28.7
THA.LOC104801720 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 3.8e-13 80.1 273 30.8
ATR0564G355 Amborella trichopoda HOM05D005306 ORTHO05D006158 1.9e-12 77.8 129 35.7
A09p08930 Brassica napus HOM05D005306 ORTHO05D006158 1.9e-12 77.8 179 34.1
CDE10G0726 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 5.5e-12 76.3 332 27.7
Glyma.08G137700 Glycine max HOM05D005306 ORTHO05D006158 5.5e-12 76.3 140 37.9
unitig_699.g19586 Utricularia gibba HOM05D033148 ORTHO05D006158 1.1e-09 68.6 274 28.8
Lj2C552G1 Lonicera japonica HOM05D005306 ORTHO05D006158 1.5e-09 68.2 117 41.9
Glyma.05G180000 Glycine max HOM05D005306 ORTHO05D006158 5.3e-07 59.7 155 30.3
BcaB02g09865 Brassica carinata HOM05D005306 ORTHO05D006158 6.9e-07 59.3 92 37.0
HPP92_004303 Vanilla planifolia HOM05D005306 ORTHO05D006158 6.9e-07 59.3 168 28.6
Hund16271 Selenicereus undatus HOM05D005306 ORTHO05D006158 9.0e-07 58.9 373 26.0
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 2.0e-06 57.8 139 29.5
THA.LOC104816509 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 7.6e-06 55.8 155 26.5


User provided reference genes

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