Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.6e-84 316.2 187 100.0
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 1.1e-69 266.9 185 84.3
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 9.7e-61 237.3 179 80.4
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 5.9e-50 201.4 180 73.3
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 1.6e-42 176.8 132 84.1
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 6.8e-30 134.8 124 75.8
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 6.2e-23 111.7 59 89.8
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 9.8e-21 104.4 54 92.6
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 3.6e-15 85.9 78 87.2
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 6.2e-15 85.1 75 94.7
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 8.1e-15 84.7 74 94.6
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 1.1e-14 84.3 78 85.9
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.4e-14 84.0 75 93.3
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.4e-14 84.0 75 93.3
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 3.1e-14 82.8 73 93.2
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 3.1e-14 82.8 76 88.2
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 4.0e-14 82.4 76 88.2
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.0e-14 82.4 72 94.4
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.0e-14 82.4 72 94.4
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 4.0e-14 82.4 72 94.4
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 4.0e-14 82.4 72 94.4
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 5.2e-14 82.0 74 90.5
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 5.2e-14 82.0 74 91.9
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 5.2e-14 82.0 74 91.9
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 5.2e-14 82.0 75 92.0
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 5.2e-14 82.0 71 95.8
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 6.8e-14 81.6 74 93.2
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 6.8e-14 81.6 74 91.9
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 6.8e-14 81.6 74 91.9
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 1.2e-13 80.9 75 90.7
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 1.2e-13 80.9 74 90.5
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.2e-13 80.9 74 90.5
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 1.2e-13 80.9 74 90.5
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.2e-13 80.9 72 91.7
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 1.2e-13 80.9 72 91.7
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 1.2e-13 80.9 74 90.5
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.2e-13 80.9 74 90.5
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.2e-13 80.9 74 91.9
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 1.2e-13 80.9 72 93.1
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 1.5e-13 80.5 72 94.4
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 1.5e-13 80.5 72 94.4
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.5e-13 80.5 71 91.5
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 1.5e-13 80.5 72 93.1
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 1.5e-13 80.5 74 91.9
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.5e-13 80.5 74 91.9
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 1.5e-13 80.5 74 91.9
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 1.5e-13 80.5 74 90.5
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 1.5e-13 80.5 74 90.5
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 1.5e-13 80.5 74 90.5
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 2.6e-13 79.7 72 90.3
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 2.6e-13 79.7 74 89.2
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 2.6e-13 79.7 74 90.5
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 3.4e-13 79.3 72 91.7
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 3.4e-13 79.3 74 89.2
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 3.4e-13 79.3 72 91.7
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 4.4e-13 79.0 73 90.4
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 4.4e-13 79.0 75 89.3
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 5.8e-13 78.6 70 94.3
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 5.8e-13 78.6 74 90.5
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 5.8e-13 78.6 74 90.5
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 5.8e-13 78.6 74 87.8
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 7.6e-13 78.2 74 87.8
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 7.6e-13 78.2 77 87.0
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 7.6e-13 78.2 72 90.3
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 7.6e-13 78.2 74 86.5
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 7.6e-13 78.2 74 86.5
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 7.6e-13 78.2 72 88.9
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 1.3e-12 77.4 71 93.0
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.3e-12 77.4 74 89.2
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.7e-12 77.0 74 89.2
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 2.2e-12 76.6 72 90.3
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 2.2e-12 76.6 73 87.7
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.2e-12 76.6 74 87.8
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 2.2e-12 76.6 74 89.2
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 2.9e-12 76.3 70 91.4
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 2.9e-12 76.3 71 90.1
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.9e-12 76.3 72 88.9
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 2.9e-12 76.3 72 90.3
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 3.7e-12 75.9 71 90.1
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 4.9e-12 75.5 71 88.7
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 1.4e-11 73.9 76 78.9
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 1.4e-11 73.9 72 86.1
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 1.4e-11 73.9 72 86.1
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.9e-11 73.6 70 88.6
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 2.4e-11 73.2 72 86.1
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 2.4e-11 73.2 72 86.1
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 3.2e-11 72.8 76 77.6
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 5.4e-11 72.0 72 84.7
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 5.4e-11 72.0 72 84.7
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 5.4e-11 72.0 72 84.7
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 5.4e-11 72.0 72 84.7
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 7.1e-11 71.6 71 85.9
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 7.1e-11 71.6 71 85.9
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 2.1e-10 70.1 74 85.1
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 4.6e-10 68.9 96 40.6
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 1.3e-09 67.4 74 82.4
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 3.0e-09 66.2 70 85.7
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 1.6e-07 60.5 146 28.8


User provided reference genes

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