Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032125.1 Olea europaea HOM05D004756 ORTHO05D005793 9.7e-161 570.1 287 100.0
Oeu011324.1 Olea europaea HOM05D004756 ORTHO05D005793 5.4e-87 325.1 247 70.9
Migut.M00214 Erythranthe guttata HOM05D004756 ORTHO05D005793 2.1e-70 270.0 250 60.8
MSTRG.15061 Avicennia marina HOM05D004756 ORTHO05D005793 1.3e-69 267.3 248 58.5
Sopen10g003750 Solanum pennellii HOM05D004756 ORTHO05D005793 1.3e-67 260.8 248 58.1
CAN.G449.74 Capsicum annuum HOM05D004756 ORTHO05D005793 3.7e-67 259.2 248 57.7
Dinv06277 Davidia involucrata HOM05D004756 ORTHO05D005793 3.7e-67 259.2 251 56.6
Cc05_g09050 Coffea canephora HOM05D004756 ORTHO05D005793 1.2e-65 254.2 247 57.1
CAN.G577.1 Capsicum annuum HOM05D004756 ORTHO05D005793 1.7e-64 250.4 193 66.3
Ciclev10020437m.g Citrus clementina HOM05D004756 ORTHO05D005793 3.8e-64 249.2 250 56.4
Ciclev10024315m.g Citrus clementina HOM05D004756 ORTHO05D005793 3.6e-62 242.7 193 65.8
GSVIVG01036218001 Vitis vinifera HOM05D004756 ORTHO05D005793 6.1e-62 241.9 251 55.8
CANSAT54G2478 Cannabis sativa HOM05D004756 ORTHO05D005793 1.4e-61 240.7 248 55.6
TAR636G3098 Trochodendron aralioides HOM05D004756 ORTHO05D005793 2.5e-60 236.5 252 53.2
Ciclev10020741m.g Citrus clementina HOM05D004756 ORTHO05D005793 9.7e-60 234.6 241 55.2
HanXRQChr01g0015131 Helianthus annuus HOM05D004756 ORTHO05D005793 2.8e-59 233.0 247 54.3
Potri.019G014000 Populus trichocarpa HOM05D004756 ORTHO05D005793 3.7e-59 232.6 250 55.6
Sabra19G0016400 Salix brachista HOM05D004756 ORTHO05D005793 4.8e-59 232.3 250 55.6
ECA248G2407 Erigeron canadensis HOM05D004756 ORTHO05D005793 1.1e-58 231.1 250 52.4
PGR142G3409 Punica granatum HOM05D004756 ORTHO05D005793 1.4e-58 230.7 251 53.0
Cfa006386 Carpinus fangiana HOM05D004756 ORTHO05D005793 1.8e-58 230.3 250 53.2
QL03p029131 Quercus lobata HOM05D004756 ORTHO05D005793 1.8e-58 230.3 248 52.4
Prupe.6G347300 Prunus persica HOM05D004756 ORTHO05D005793 4.1e-58 229.2 250 53.6
CiPaw.07G070600 Carya illinoinensis HOM05D004756 ORTHO05D005793 5.3e-58 228.8 248 52.0
Ca_02704_v3 Cicer arietinum L. HOM05D004756 ORTHO05D005793 5.3e-58 228.8 248 54.4
Duzib128G2034 Durio zibethinus HOM05D004756 ORTHO05D005793 2.6e-57 226.5 249 53.0
Sabra19G0026700 Salix brachista HOM05D004756 ORTHO05D005793 4.5e-57 225.7 250 54.0
EL10Ac9g21026 Beta vulgaris HOM05D004756 ORTHO05D005793 5.9e-57 225.3 251 51.8
CsaV3_1G045570 Cucumis sativus L. HOM05D004756 ORTHO05D005793 7.7e-57 224.9 249 51.4
Rhsim06G0122800 Rhododendron simsii HOM05D004756 ORTHO05D005793 1.0e-56 224.6 278 49.6
Phvul.011G079900 Phaseolus vulgaris HOM05D004756 ORTHO05D005793 1.3e-56 224.2 252 54.0
VMungo1127G1235 Vigna mungo HOM05D000724 ORTHO05D000755 1.3e-56 224.2 250 52.0
Haze_04391 Corylus avellana HOM05D004756 ORTHO05D005793 1.7e-56 223.8 248 52.4
Ah.15g093660 Amaranthus hybridus HOM05D004756 ORTHO05D005793 2.2e-56 223.4 252 52.4
AUR62024000 Chenopodium quinoa HOM05D004756 ORTHO05D005793 2.2e-56 223.4 249 51.4
Glyma.04G156000 Glycine max HOM05D004756 ORTHO05D005793 3.8e-56 222.6 257 51.8
Sed0006035 Sechium edule HOM05D004756 ORTHO05D005793 5.0e-56 222.2 249 51.0
Sed0007432 Sechium edule HOM05D004756 ORTHO05D005793 5.0e-56 222.2 249 51.0
Sed0019802 Sechium edule HOM05D004756 ORTHO05D005793 5.0e-56 222.2 249 51.0
vmacro12429 Vaccinium macrocarpon HOM05D004756 ORTHO05D005793 6.5e-56 221.9 200 62.0
ATR0665G165 Amborella trichopoda HOM05D004756 ORTHO05D005793 1.4e-55 220.7 194 61.3
Ciclev10021087m.g Citrus clementina HOM05D004756 ORTHO05D005793 1.4e-55 220.7 250 52.4
Manes.07G069500 Manihot esculenta HOM05D004756 ORTHO05D005793 1.4e-55 220.7 247 51.8
Hund00823 Selenicereus undatus HOM05D004756 ORTHO05D005793 1.9e-55 220.3 196 59.2
PSO528G0135 Papaver somniferum HOM05D004756 ORTHO05D005793 3.2e-55 219.5 248 50.0
Glyma.06G217200 Glycine max HOM05D004756 ORTHO05D005793 4.2e-55 219.2 250 52.8
TPR.G15315 Trifolium pratense HOM05D004756 ORTHO05D005793 4.2e-55 219.2 194 61.9
Psat0s4043g0080 Pisum sativum HOM05D004756 ORTHO05D005793 5.5e-55 218.8 248 50.4
Sed0025298 Sechium edule HOM05D004756 ORTHO05D005793 5.5e-55 218.8 249 50.6
COL.COLO4_15415 Corchorus olitorius HOM05D004756 ORTHO05D005793 7.2e-55 218.4 252 53.2
MELO3C024666.2 Cucumis melo HOM05D004756 ORTHO05D005793 7.2e-55 218.4 249 50.6
Lj7A537T48 Lonicera japonica HOM05D004756 ORTHO05D005793 7.2e-55 218.4 196 62.2
Lj6g0025011 Lotus japonicus HOM05D004756 ORTHO05D005793 1.2e-54 217.6 249 51.8
SGA_v2.0_scaffold130G34203 Striga asiatica HOM05D004756 ORTHO05D005793 1.2e-54 217.6 200 60.0
RcHm_v2.0_Chr3g0450151 Rosa chinensis HOM05D004756 ORTHO05D005793 1.6e-54 217.2 250 52.0
Sc21g0004350 Simmondsia chinensis HOM05D004756 ORTHO05D005793 2.1e-54 216.9 249 49.8
Thecc.05G277000 Theobroma cacao HOM05D004756 ORTHO05D005793 2.1e-54 216.9 249 51.8
Gohir.A11G250600 Gossypium hirsutum HOM05D004756 ORTHO05D005793 3.6e-54 216.1 250 50.0
PSO170G6485 Papaver somniferum HOM05D004756 ORTHO05D005793 3.6e-54 216.1 246 50.0
THA.LOC104808029 Tarenaya hassleriana HOM05D004756 ORTHO05D005793 3.6e-54 216.1 249 51.0
Carub.0001s0809 Capsella rubella HOM05D004756 ORTHO05D005793 4.7e-54 215.7 249 51.4
ClCG06G009440 Citrullus lanatus HOM05D004756 ORTHO05D005793 7.9e-54 214.9 249 49.8
FvH4_6g02380 Fragaria vesca HOM05D004756 ORTHO05D005793 7.9e-54 214.9 251 49.8
FAN09G0888 Fragaria x ananassa HOM05D004756 ORTHO05D005793 7.9e-54 214.9 251 50.2
Lalb_Chr08g0234301 Lupinus albus HOM05D004756 ORTHO05D005793 7.9e-54 214.9 251 50.6
Nn2g12710 Nelumbo nucifera HOM05D004756 ORTHO05D005793 7.9e-54 214.9 251 49.8
Actinidia12823 Actinidia chinensis HOM05D000054 ORTHO05D005793 1.0e-53 214.5 226 55.3
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 1.0e-53 214.5 246 51.2
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.0e-53 214.5 250 49.6
Gorai.007G279800 Gossypium raimondii HOM05D004756 ORTHO05D005793 1.0e-53 214.5 255 51.4
MD04G1227700 Malus domestica HOM05D004756 ORTHO05D005793 1.4e-53 214.2 196 60.2
Gohir.A11G250480 Gossypium hirsutum HOM05D004756 ORTHO05D005793 1.8e-53 213.8 252 50.0
Solyc10g007850.3 Solanum lycopersicum HOM05D004756 ORTHO05D005793 6.7e-53 211.8 200 59.5
AT1G08750 Arabidopsis thaliana HOM05D004756 ORTHO05D005793 2.0e-52 210.3 256 48.8
Medtr2g058550 Medicago truncatula HOM05D004756 ORTHO05D005793 2.0e-52 210.3 195 59.5
Sp1g07390 Schrenkiella parvula HOM05D004756 ORTHO05D005793 2.6e-52 209.9 251 49.0
unitig_62.g23111 Utricularia gibba HOM05D004756 ORTHO05D005793 2.6e-52 209.9 247 50.2
TWI56G0480 Tripterygium wilfordii HOM05D004756 ORTHO05D005793 4.4e-52 209.1 248 49.2
CARHR008670 Cardamine hirsuta HOM05D004756 ORTHO05D005793 5.7e-52 208.8 250 49.2
C05p06830 Brassica napus HOM05D004756 ORTHO05D005793 7.4e-52 208.4 250 48.8
Lsat_1_v5_gn_5_179521 Lactuca sativa HOM05D004756 ORTHO05D005793 1.7e-51 207.2 235 49.8
Aa31LG8G10570 Aethionema arabicum HOM05D004756 ORTHO05D005793 8.2e-51 204.9 244 49.2
AL1G19180 Arabidopsis lyrata HOM05D004756 ORTHO05D005793 8.2e-51 204.9 251 47.8
A06p05660 Brassica napus HOM05D004756 ORTHO05D005793 8.2e-51 204.9 250 48.8
Thhalv10007907m.g Eutrema salsugineum HOM05D004756 ORTHO05D005793 8.2e-51 204.9 249 49.0
Sed0000709 Sechium edule HOM05D004756 ORTHO05D005793 1.4e-50 204.1 249 49.4
BcaB03g13316 Brassica carinata HOM05D004756 ORTHO05D005793 2.4e-50 203.4 251 48.6
PGSC0003DMG400021238 Solanum tuberosum HOM05D004756 ORTHO05D005793 4.1e-50 202.6 170 63.5
SEGI_24335 Sequoiadendron giganteum HOM05D004756 ORTHO05D005793 5.3e-50 202.2 247 49.0
CDE06G0731 Ceratophyllum demersum HOM05D004756 ORTHO05D005793 1.2e-49 201.1 255 47.5
Atru.chr2.885 Acer truncatum HOM05D004756 ORTHO05D005793 3.5e-49 199.5 197 58.9
Eucgr.H00259 Eucalyptus grandis HOM05D004756 ORTHO05D005793 3.5e-49 199.5 249 49.0
Eucgr.L01375 Eucalyptus grandis HOM05D004756 ORTHO05D005793 4.5e-49 199.1 249 49.0
Lj7A536T7 Lonicera japonica HOM05D004756 ORTHO05D005793 4.5e-49 199.1 247 49.4
BolC5t29441H Brassica oleracea HOM05D004756 ORTHO05D005793 7.7e-49 198.4 253 47.8
BraA06t23775Z Brassica rapa HOM05D004756 ORTHO05D005793 7.7e-49 198.4 253 47.8
CSS0029039 Camellia sinensis var. sinensis HOM05D004756 ORTHO05D005793 1.7e-48 197.2 176 61.4
FAN13G2410 Fragaria x ananassa HOM05D004756 ORTHO05D005793 5.0e-48 195.7 191 58.6
BcaNung06265 Brassica carinata HOM05D000200 ORTHO05D005793 8.5e-48 194.9 240 47.9
Nitab4.5_0002027g0100 Nicotiana tabacum HOM05D004756 ORTHO05D005793 1.1e-47 194.5 265 45.7
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.5e-47 193.4 206 54.4
FAN08G1019 Fragaria x ananassa HOM05D004756 ORTHO05D005793 5.5e-47 192.2 191 58.1
Os02g0219400 Oryza sativa ssp. japonica HOM05D004756 ORTHO05D005793 5.5e-47 192.2 250 46.8
FvH4_5g04770 Fragaria vesca HOM05D004756 ORTHO05D005793 9.4e-47 191.4 191 57.6
FAN04G1391 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.1e-46 190.3 195 55.4
Actinidia11184 Actinidia chinensis HOM05D004756 ORTHO05D005793 6.1e-46 188.7 276 45.7
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 6.1e-46 188.7 172 59.9
FAN02G1286 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.4e-45 187.6 191 58.1
FAN05G2727 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.8e-45 187.2 191 57.1
A09p65770 Brassica napus HOM05D000239 ORTHO05D001037 3.9e-45 186.0 179 57.0
BraA09t41921Z Brassica rapa HOM05D000239 ORTHO05D000484 5.2e-45 185.7 182 57.7
HPP92_018816 Vanilla planifolia HOM05D004756 ORTHO05D005793 2.0e-44 183.7 247 44.5
CDE07G1473 Ceratophyllum demersum HOM05D004756 ORTHO05D005793 2.6e-44 183.3 236 47.0
C08p49840 Brassica napus HOM05D000239 ORTHO05D000484 3.8e-40 169.5 110 78.2
arahy.Tifrunner.gnm1.ann1.N732CA Arachis hypogaea HOM05D004756 ORTHO05D005793 5.2e-37 159.1 247 42.5
FAN18G1570 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.0e-36 157.1 250 41.2
arahy.Tifrunner.gnm1.ann1.2YXN00 Arachis hypogaea HOM05D004756 ORTHO05D005793 2.6e-36 156.8 247 43.3
Aqoxy2G03592 Aquilegia oxysepala HOM05D004756 ORTHO05D005793 9.7e-36 154.8 269 37.5
Zm00001eb205610 Zea mays HOM05D004756 ORTHO05D005793 1.8e-34 150.6 139 58.3
Pp3c9_23730 Physcomitrium patens HOM05D004756 ORTHO05D005793 1.6e-33 147.5 112 61.6
Lsat_1_v5_gn_8_53341 Lactuca sativa HOM05D004756 ORTHO05D005793 2.2e-32 143.7 84 84.5
CBR_g39523 Chara braunii HOM05D004756 ORTHO05D005793 1.5e-31 141.0 114 61.4
Mapoly0092s0030 Marchantia polymorpha HOM05D004756 ORTHO05D005793 4.7e-30 136.0 133 51.9
Mapoly0069s0027 Marchantia polymorpha HOM05D004756 ORTHO05D005793 2.3e-29 133.7 133 50.4
SMO356G0549 Selaginella moellendorffii HOM05D004756 ORTHO05D005793 5.7e-28 129.0 106 61.3
AagrBONN_evm.TU.Sc2ySwM_228.4219 Anthoceros agrestis HOM05D004756 ORTHO05D005793 1.0e-24 118.2 135 50.4
Ciclev10021567m.g Citrus clementina HOM05D004756 ORTHO05D005793 9.5e-23 111.7 117 53.8
Lsat_1_v5_gn_2_109700 Lactuca sativa HOM05D004756 ORTHO05D005793 1.2e-20 104.8 60 86.7
Cpa.g.sc164.15 Carica papaya HOM05D004756 ORTHO05D005793 4.9e-19 99.4 55 89.1
Glyma.20G034600 Glycine max HOM05D004756 ORTHO05D005793 6.3e-19 99.0 55 90.9
SHI31377 Sapria himalayana HOM05D004756 ORTHO05D005793 6.3e-19 99.0 112 50.9
PGSC0003DMG400011460 Solanum tuberosum HOM05D004756 ORTHO05D005793 6.6e-16 89.0 100 49.0
MCO16G186 Micromonas commoda HOM05D004756 ORTHO05D005793 1.5e-15 87.8 196 30.6
Mapoly0092s0031 Marchantia polymorpha HOM05D004756 ORTHO05D005793 2.8e-14 83.6 102 43.1
DCAR_010735 Daucus carota HOM05D004756 ORTHO05D005793 1.8e-13 80.9 199 33.2
Cre03.g153800 Chlamydomonas reinhardtii HOM05D004756 ORTHO05D005793 4.0e-13 79.7 231 28.1
Haze_27491 Corylus avellana HOM05D004756 ORTHO05D005793 5.2e-13 79.3 97 41.2
Peaxi162Scf00035g03127 Petunia axillaris HOM05D004756 ORTHO05D005793 4.4e-12 76.3 136 40.4
PGSC0003DMG400011666 Solanum tuberosum HOM05D004756 ORTHO05D005793 1.6e-09 67.8 88 44.3
Cfa024521 Carpinus fangiana HOM05D004756 ORTHO05D005793 1.3e-08 64.7 147 32.7
PGSC0003DMG400011672 Solanum tuberosum HOM05D004756 ORTHO05D005793 1.3e-08 64.7 74 44.6


User provided reference genes

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