Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032057.1 Olea europaea HOM05D005072 ORTHO05D006209 4.0e-90 334.7 168 100.0
Oeu032059.1 Olea europaea HOM05D005072 ORTHO05D006209 3.1e-50 202.2 171 67.8
Oeu032047.1 Olea europaea HOM05D005072 ORTHO05D006209 6.5e-32 141.4 81 87.7
SGA_v2.0_scaffold16G07591 Striga asiatica HOM05D005072 ORTHO05D006209 7.7e-25 117.9 170 44.1
Solyc01g009030.4 Solanum lycopersicum HOM05D005072 ORTHO05D006209 7.2e-23 111.3 181 39.8
Sopen01g004520 Solanum pennellii HOM05D005072 ORTHO05D006209 1.6e-22 110.2 181 39.8
Migut.N02404 Erythranthe guttata HOM05D005072 ORTHO05D006209 6.1e-22 108.2 171 40.9
Thecc.09G251600 Theobroma cacao HOM05D005072 ORTHO05D006209 6.8e-21 104.8 175 41.7
MSTRG.12421 Avicennia marina HOM05D005072 ORTHO05D006209 1.2e-20 104.0 168 40.5
SalBow3G4478 Salvia bowleyana HOM05D005072 ORTHO05D006209 2.0e-20 103.2 173 37.0
CAN.G651.4 Capsicum annuum HOM05D005072 ORTHO05D006209 2.6e-20 102.8 177 43.5
Nitab4.5_0002300g0060 Nicotiana tabacum HOM05D005072 ORTHO05D006209 1.7e-19 100.1 183 38.8
Cc01_g07180 Coffea canephora HOM05D005072 ORTHO05D006209 5.4e-18 95.1 175 39.4
Dinv24604 Davidia involucrata HOM05D005072 ORTHO05D006209 7.0e-18 94.7 173 39.3
Actinidia29952 Actinidia chinensis HOM05D005072 ORTHO05D006209 2.7e-17 92.8 167 39.5
Cfa010164 Carpinus fangiana HOM05D005072 ORTHO05D006209 2.7e-17 92.8 173 39.3
Haze_23549 Corylus avellana HOM05D005072 ORTHO05D006209 3.5e-17 92.4 173 38.7
Duzib170G0952 Durio zibethinus HOM05D005072 ORTHO05D006209 3.5e-17 92.4 171 36.8
unitig_27.g25017 Utricularia gibba HOM05D005072 ORTHO05D006209 3.5e-17 92.4 159 38.4
Duzib168G1271 Durio zibethinus HOM05D005072 ORTHO05D006209 5.9e-17 91.7 170 36.5
Ciclev10014694m.g Citrus clementina HOM05D005072 ORTHO05D006209 1.7e-16 90.1 164 37.2
COL.COLO4_33262 Corchorus olitorius HOM05D005072 ORTHO05D006209 3.8e-16 89.0 175 33.1
Gohir.A08G009400 Gossypium hirsutum HOM05D005072 ORTHO05D006209 8.6e-16 87.8 177 37.9
Gohir.D08G019500 Gossypium hirsutum HOM05D005072 ORTHO05D006209 1.5e-15 87.0 177 36.2
Gorai.004G014000 Gossypium raimondii HOM05D005072 ORTHO05D006209 1.5e-15 87.0 177 36.2
Hma1.2p1_1843F.1_g305080 Hydrangea macrophylla HOM05D005072 ORTHO05D006209 1.9e-15 86.7 169 39.6
Nitab4.5_0000428g0060 Nicotiana tabacum HOM05D005072 ORTHO05D006209 1.9e-15 86.7 183 35.5
Lj1C290G6 Lonicera japonica HOM05D005072 ORTHO05D006209 2.5e-15 86.3 173 37.0
Prupe.4G269200 Prunus persica HOM05D005072 ORTHO05D006209 9.5e-15 84.3 165 36.4
ClCG02G022550 Citrullus lanatus HOM05D005072 ORTHO05D006209 3.6e-14 82.4 175 36.6
MELO3C014531.2 Cucumis melo HOM05D005072 ORTHO05D006209 4.7e-14 82.0 165 35.8
CsaV3_6G038680 Cucumis sativus L. HOM05D005072 ORTHO05D006209 4.7e-14 82.0 165 36.4
AL6G23090 Arabidopsis lyrata HOM05D005072 ORTHO05D006209 8.0e-14 81.3 173 37.6
AT5G12290 Arabidopsis thaliana HOM05D005072 ORTHO05D006209 1.4e-13 80.5 173 37.6
Atru.chr3.2833 Acer truncatum HOM05D005072 ORTHO05D006209 1.8e-13 80.1 173 33.5
Thhalv10013024m.g Eutrema salsugineum HOM05D005072 ORTHO05D006209 1.8e-13 80.1 170 37.1
Peaxi162Scf00050g02225 Petunia axillaris HOM05D005072 ORTHO05D006209 1.8e-13 80.1 167 34.7
Aa31LG3G14940 Aethionema arabicum HOM05D005072 ORTHO05D006209 4.0e-13 79.0 173 34.1
MD03G1163400 Malus domestica HOM05D005072 ORTHO05D006209 5.2e-13 78.6 168 35.7
THA.LOC104799144 Tarenaya hassleriana HOM05D005072 ORTHO05D006209 5.2e-13 78.6 175 35.4
TWI79G0414 Tripterygium wilfordii HOM05D005072 ORTHO05D006209 6.8e-13 78.2 173 34.1
TAR623G1264 Trochodendron aralioides HOM05D005072 ORTHO05D006209 8.9e-13 77.8 167 34.7
Carub.0006s1080 Capsella rubella HOM05D005072 ORTHO05D006209 1.5e-12 77.0 173 35.8
vmacro14280 Vaccinium macrocarpon HOM05D005072 ORTHO05D006209 2.6e-12 76.3 171 36.3
PSO541G4749 Papaver somniferum HOM05D005072 ORTHO05D006209 4.4e-12 75.5 156 34.0
PSO675G4775 Papaver somniferum HOM05D005072 ORTHO05D006209 5.7e-12 75.1 156 34.6
BcaB01g05412 Brassica carinata HOM05D005072 ORTHO05D006209 9.8e-12 74.3 165 33.9
QL01p016041 Quercus lobata HOM05D005072 ORTHO05D006209 9.8e-12 74.3 163 35.0
BolC2t06512H Brassica oleracea HOM05D005072 ORTHO05D006209 1.3e-11 73.9 183 31.7
Lsat_1_v5_gn_2_36161 Lactuca sativa HOM05D005072 ORTHO05D006209 1.3e-11 73.9 179 36.3
C02p05680 Brassica napus HOM05D005072 ORTHO05D006209 1.7e-11 73.6 169 34.3
CARHR200820 Cardamine hirsuta HOM05D005072 ORTHO05D006209 1.7e-11 73.6 170 35.9
RcHm_v2.0_Chr7g0190441 Rosa chinensis HOM05D005072 ORTHO05D006209 1.7e-11 73.6 168 38.7
Aqoxy279s001 Aquilegia oxysepala HOM05D005072 ORTHO05D006209 2.2e-11 73.2 167 34.1
Aqoxy2G00052 Aquilegia oxysepala HOM05D005072 ORTHO05D006209 2.2e-11 73.2 167 34.1
A02p01460 Brassica napus HOM05D005072 ORTHO05D006209 2.9e-11 72.8 169 34.3
EL10Ac4g10071 Beta vulgaris HOM05D005072 ORTHO05D006209 3.7e-11 72.4 167 32.9
BraA02t05125Z Brassica rapa HOM05D005072 ORTHO05D006209 4.9e-11 72.0 184 32.6
Hund21956 Selenicereus undatus HOM05D005072 ORTHO05D006209 4.9e-11 72.0 164 36.0
Sp6g31350 Schrenkiella parvula HOM05D005072 ORTHO05D006209 8.3e-11 71.2 165 33.3
HanXRQChr05g0144311 Helianthus annuus HOM05D005072 ORTHO05D006209 1.1e-10 70.9 163 32.5
Cpa.g.sc34.205 Carica papaya HOM05D005072 ORTHO05D006209 1.4e-10 70.5 168 33.3
ECA238G1118 Erigeron canadensis HOM05D005072 ORTHO05D006209 4.1e-10 68.9 172 34.3
FAN18G1184 Fragaria x ananassa HOM05D005072 ORTHO05D006209 4.1e-10 68.9 178 36.5
DCAR_023860 Daucus carota HOM05D005072 ORTHO05D006209 7.0e-10 68.2 53 54.7
Sed0004908 Sechium edule HOM05D005072 ORTHO05D006209 9.2e-10 67.8 177 29.9
AUR62000232 Chenopodium quinoa HOM05D005072 ORTHO05D006209 5.9e-09 65.1 162 32.1
Potri.009G022200 Populus trichocarpa HOM05D005072 ORTHO05D006209 1.3e-08 63.9 176 31.8
MBI13_g20755_MAGBIO Magnolia biondii HOM05D005072 ORTHO05D006209 1.7e-08 63.5 155 31.6
TPR.G16394 Trifolium pratense HOM05D005072 ORTHO05D006209 1.7e-08 63.5 166 33.1
CSS0034993 Camellia sinensis var. sinensis HOM05D005072 ORTHO05D006209 2.3e-08 63.2 162 32.1
CANSAT54G0197 Cannabis sativa HOM05D005072 ORTHO05D006209 2.3e-08 63.2 172 29.7
AUR62006578 Chenopodium quinoa HOM05D005072 ORTHO05D006209 2.3e-08 63.2 162 30.9
FvH4_5g07960 Fragaria vesca HOM05D005072 ORTHO05D006209 3.9e-08 62.4 178 35.4
Actinidia27132 Actinidia chinensis HOM05D005072 ORTHO05D006209 8.6e-08 61.2 114 37.7
Eucgr.B03761 Eucalyptus grandis HOM05D005072 ORTHO05D006209 8.6e-08 61.2 175 33.7
C03p06430 Brassica napus HOM05D005072 ORTHO05D006209 1.1e-07 60.8 141 35.5
Hma1.2p1_2592F.1_g325060 Hydrangea macrophylla HOM05D005072 ORTHO05D006209 1.5e-07 60.5 53 52.8
Medtr5g088780 Medicago truncatula HOM05D005072 ORTHO05D006209 2.5e-07 59.7 166 31.3
CSS0024863 Camellia sinensis var. sinensis HOM05D005072 ORTHO05D006209 3.3e-07 59.3 162 31.5
Lj1C297T8 Lonicera japonica HOM05D005072 ORTHO05D006209 4.3e-07 58.9 53 49.1
PGR102G1516 Punica granatum HOM05D005072 ORTHO05D006209 4.3e-07 58.9 169 30.8
Lalb_Chr10g0106071 Lupinus albus HOM05D005072 ORTHO05D006209 5.6e-07 58.5 163 32.5
GSVIVG01037391001 Vitis vinifera HOM05D005072 ORTHO05D006209 5.6e-07 58.5 170 30.6
arahy.Tifrunner.gnm1.ann1.BCWF2K Arachis hypogaea HOM05D005072 ORTHO05D006209 7.3e-07 58.2 163 30.7
Phvul.008G203700 Phaseolus vulgaris HOM05D005072 ORTHO05D006209 7.3e-07 58.2 162 30.9
CiPaw.14G108700 Carya illinoinensis HOM05D005072 ORTHO05D006209 1.2e-06 57.4 53 50.9
Ca_06178_v3 Cicer arietinum L. HOM05D005072 ORTHO05D006209 1.6e-06 57.0 160 33.1
FAN04G1678 Fragaria x ananassa HOM05D005072 ORTHO05D006209 8.0e-06 54.7 179 33.0
Psat0s680g0080 Pisum sativum HOM05D005072 ORTHO05D006209 8.0e-06 54.7 156 30.1
Zm00001eb017230 Zea mays HOM05D005072 ORTHO05D006209 8.0e-06 54.7 177 26.6


User provided reference genes

Program Settings