Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032037.1 Olea europaea HOM05D011325 ORTHO05D000630 3.5e-222 774.6 386 100.0
Oeu032036.1 Olea europaea HOM05D011325 ORTHO05D000630 1.6e-174 616.3 447 74.0
Oeu025932.1 Olea europaea HOM05D011325 ORTHO05D000630 3.1e-85 319.7 424 48.6
Oeu032035.1 Olea europaea HOM05D011325 ORTHO05D000630 5.8e-84 315.5 240 69.6
Oeu025931.1 Olea europaea HOM05D011325 ORTHO05D000630 1.4e-69 267.7 419 46.8
Oeu025933.1 Olea europaea HOM05D011325 ORTHO05D000630 5.0e-51 206.1 373 41.3
Cc01_g06930 Coffea canephora HOM05D000174 ORTHO05D000630 1.2e-23 115.2 345 33.0
Peaxi162Scf00234g00042 Petunia axillaris HOM05D000174 ORTHO05D000630 2.2e-22 110.9 293 34.5
PGSC0003DMG400034376 Solanum tuberosum HOM05D000174 ORTHO05D000630 4.8e-22 109.8 224 34.4
Oeu025928.1 Olea europaea HOM05D011325 ORTHO05D000630 9.1e-21 105.5 189 40.7
CAN.G1085.7 Capsicum annuum HOM05D000174 ORTHO05D000630 2.0e-20 104.4 291 33.0
Sopen10g025660 Solanum pennellii HOM05D011325 ORTHO05D000630 2.7e-20 104.0 214 35.0
Solyc11g072210.1 Solanum lycopersicum HOM05D000174 ORTHO05D000630 4.5e-20 103.2 218 34.9
Migut.N02396 Erythranthe guttata HOM05D000174 ORTHO05D000630 1.0e-19 102.1 263 31.6
Sopen10g026890 Solanum pennellii HOM05D011325 ORTHO05D000630 1.0e-19 102.1 202 36.1
Sopen11g029860 Solanum pennellii HOM05D000174 ORTHO05D000630 2.9e-19 100.5 218 34.4
SGA_v2.0_scaffold79G25559 Striga asiatica HOM05D011325 ORTHO05D000630 3.2e-18 97.1 175 37.7
Dinv40916 Davidia involucrata HOM05D008543 ORTHO05D000630 7.2e-18 95.9 263 31.2
Actinidia30352 Actinidia chinensis HOM05D008543 ORTHO05D000630 2.1e-17 94.4 292 29.5
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 2.7e-17 94.0 148 36.5
Nitab4.5_0000205g0040 Nicotiana tabacum HOM05D059491 ORTHO05D000630 1.0e-16 92.0 103 50.5
Rhsim06G0235100 Rhododendron simsii HOM05D000174 ORTHO05D000630 1.0e-16 92.0 339 29.5
FvH4_3g41600 Fragaria vesca HOM05D000174 ORTHO05D000630 4.0e-16 90.1 159 35.8
FAN11G0349 Fragaria x ananassa HOM05D000174 ORTHO05D000630 4.0e-16 90.1 159 35.8
FAN21G0599 Fragaria x ananassa HOM05D000174 ORTHO05D000630 4.0e-16 90.1 159 35.8
FAN25G3117 Fragaria x ananassa HOM05D000174 ORTHO05D000630 6.8e-16 89.4 159 35.8
FAN16G0761 Fragaria x ananassa HOM05D000174 ORTHO05D000630 8.8e-16 89.0 159 35.2
Oeu032038.1 Olea europaea HOM05D011325 ORTHO05D000630 1.2e-15 88.6 212 36.8
Oeu052885.1 Olea europaea HOM05D008543 ORTHO05D000630 1.5e-15 88.2 229 33.6
Oeu006263.1 Olea europaea HOM05D008543 ORTHO05D000630 2.6e-15 87.4 254 32.7
CSS0016853 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000630 5.7e-15 86.3 301 29.9
CSS0041839 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 5.7e-15 86.3 301 29.9
PGSC0003DMG400022147 Solanum tuberosum HOM05D008543 ORTHO05D000630 7.5e-15 85.9 261 31.0
MD11G1046000 Malus domestica HOM05D000174 ORTHO05D000630 1.1e-13 82.0 176 36.4
CSS0027724 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 1.8e-13 81.3 144 36.8
Nn1g07630 Nelumbo nucifera HOM05D000174 ORTHO05D000630 4.1e-13 80.1 344 27.3
Prupe.6G035400 Prunus persica HOM05D000174 ORTHO05D000630 4.1e-13 80.1 238 31.9
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 5.4e-13 79.7 248 30.6
HanXRQChr03g0079361 Helianthus annuus HOM05D000174 ORTHO05D000630 1.6e-12 78.2 128 38.3
MD03G1043000 Malus domestica HOM05D000174 ORTHO05D000630 1.6e-12 78.2 176 35.2
Nitab4.5_0000152g0060 Nicotiana tabacum HOM05D008543 ORTHO05D000630 4.5e-12 76.6 253 29.6
Gohir.A07G119050 Gossypium hirsutum HOM05D008543 ORTHO05D000630 5.9e-12 76.3 125 38.4
TAR636G0894 Trochodendron aralioides HOM05D008543 ORTHO05D000630 2.3e-11 74.3 261 30.3
EL10Ac4g10054 Beta vulgaris HOM05D008543 ORTHO05D000630 5.0e-11 73.2 258 24.8
QL08p000516 Quercus lobata HOM05D000174 ORTHO05D000630 5.0e-11 73.2 227 30.8
Gohir.D07G123350 Gossypium hirsutum HOM05D008543 ORTHO05D000630 6.6e-11 72.8 125 37.6
Gorai.001G133100 Gossypium raimondii HOM05D008543 ORTHO05D000630 6.6e-11 72.8 125 37.6
Nn1g07631 Nelumbo nucifera HOM05D000174 ORTHO05D000630 6.6e-11 72.8 267 26.2
Sc16g0010820 Simmondsia chinensis HOM05D008543 ORTHO05D000630 8.6e-11 72.4 285 28.1
RcHm_v2.0_Chr5g0074621 Rosa chinensis HOM05D000174 ORTHO05D000630 1.1e-10 72.0 213 30.0
SGA_v2.0_scaffold7G03548 Striga asiatica HOM05D008543 ORTHO05D000630 1.1e-10 72.0 219 27.9
BcaB01g03035 Brassica carinata HOM05D012084 ORTHO05D000630 1.5e-10 71.6 127 32.3
CAN.G623.74 Capsicum annuum HOM05D008543 ORTHO05D000630 1.5e-10 71.6 225 30.7
BolC4t23958H Brassica oleracea HOM05D012084 ORTHO05D000630 3.3e-10 70.5 135 31.9
DCAR_017611 Daucus carota HOM05D000174 ORTHO05D000630 3.3e-10 70.5 102 36.3
Lsat_1_v5_gn_9_88600 Lactuca sativa HOM05D000174 ORTHO05D000630 5.5e-10 69.7 150 34.7
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 7.2e-10 69.3 159 32.7
Lalb_Chr17g0347691 Lupinus albus HOM05D008543 ORTHO05D000630 1.2e-09 68.6 206 28.2
PGR119G0147 Punica granatum HOM05D000174 ORTHO05D000630 1.6e-09 68.2 194 28.9
Cfa016961 Carpinus fangiana HOM05D000174 ORTHO05D000630 2.1e-09 67.8 149 33.6
CiPaw.12G142600 Carya illinoinensis HOM05D000174 ORTHO05D000630 2.8e-09 67.4 182 30.8
SGA_v2.0_scaffold79G25561 Striga asiatica HOM05D011325 ORTHO05D000630 3.6e-09 67.0 94 44.7
Carub.0003s1290 Capsella rubella HOM05D012084 ORTHO05D000630 4.7e-09 66.6 139 33.1
Eucgr.F03645 Eucalyptus grandis HOM05D008543 ORTHO05D000630 4.7e-09 66.6 118 38.1
Gohir.A08G009700 Gossypium hirsutum HOM05D008543 ORTHO05D000630 6.1e-09 66.2 170 30.6
Gohir.D08G019750 Gossypium hirsutum HOM05D008543 ORTHO05D000630 6.1e-09 66.2 170 30.6
Gorai.004G014300 Gossypium raimondii HOM05D008543 ORTHO05D000630 6.1e-09 66.2 170 30.6
Nitab4.5_0009408g0010 Nicotiana tabacum HOM05D008543 ORTHO05D000630 6.1e-09 66.2 406 25.6
Peaxi162Scf00232g00062 Petunia axillaris HOM05D008543 ORTHO05D000630 6.1e-09 66.2 206 32.0
AL4G20180 Arabidopsis lyrata HOM05D012084 ORTHO05D000630 8.0e-09 65.9 105 34.3
Glyma.13G073300 Glycine max HOM05D022580 ORTHO05D000630 8.0e-09 65.9 167 32.3
CiPaw.11G210700 Carya illinoinensis HOM05D000174 ORTHO05D000630 1.0e-08 65.5 285 25.6
Prupe.6G093500 Prunus persica HOM05D025829 ORTHO05D000630 1.0e-08 65.5 181 29.8
AT2G26940 Arabidopsis thaliana HOM05D012084 ORTHO05D000630 1.4e-08 65.1 115 33.0
AT5G56200 Arabidopsis thaliana HOM05D000174 ORTHO05D000630 1.4e-08 65.1 97 41.2
ECA240G0792 Erigeron canadensis HOM05D000174 ORTHO05D000630 1.4e-08 65.1 166 32.5
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 1.4e-08 65.1 245 28.6
Atru.chr2.3896 Acer truncatum HOM05D000174 ORTHO05D000630 1.8e-08 64.7 167 34.7
A10p13430 Brassica napus HOM05D000174 ORTHO05D000630 1.8e-08 64.7 155 31.6
BraA10t43446Z Brassica rapa HOM05D000174 ORTHO05D000630 1.8e-08 64.7 155 31.6
Haze_09916 Corylus avellana HOM05D000174 ORTHO05D000630 1.8e-08 64.7 211 30.3
Oeu052027.2 Olea europaea HOM05D000784 ORTHO05D000116 1.8e-08 64.7 104 37.5
BcaC04g20137 Brassica carinata HOM05D000174 ORTHO05D000630 2.3e-08 64.3 160 30.6
BolC9t57599H Brassica oleracea HOM05D000174 ORTHO05D000630 2.3e-08 64.3 160 30.6
TPR.G11948 Trifolium pratense HOM05D008543 ORTHO05D000630 2.3e-08 64.3 107 37.4
Carub.0008s1652 Capsella rubella HOM05D000174 ORTHO05D000630 4.0e-08 63.5 85 42.4
MELO3C018946.2 Cucumis melo HOM05D001658 ORTHO05D001406 4.0e-08 63.5 112 36.6
Thecc.09G250700 Theobroma cacao HOM05D008543 ORTHO05D000630 4.0e-08 63.5 168 35.1
AL8G31830 Arabidopsis lyrata HOM05D000174 ORTHO05D000630 5.2e-08 63.2 86 41.9
CsaV3_4G008830 Cucumis sativus L. HOM05D001658 ORTHO05D001406 5.2e-08 63.2 112 36.6
Sp6g18050 Schrenkiella parvula HOM05D000174 ORTHO05D000630 5.2e-08 63.2 100 38.0
ATR0751G124 Amborella trichopoda HOM05D010587 ORTHO05D001526 6.8e-08 62.8 140 29.3
Duzib150G0090 Durio zibethinus HOM05D008543 ORTHO05D000630 6.8e-08 62.8 116 36.2
MD03G1110900 Malus domestica HOM05D025829 ORTHO05D000630 8.9e-08 62.4 101 38.6
BcaB08g35982 Brassica carinata HOM05D000174 ORTHO05D000630 1.2e-07 62.0 162 30.9
BcaC02g10848 Brassica carinata HOM05D012084 ORTHO05D000630 1.2e-07 62.0 144 30.6
C04p24550 Brassica napus HOM05D012084 ORTHO05D000630 1.2e-07 62.0 144 30.6
Glyma.20G047500 Glycine max HOM05D022580 ORTHO05D000630 1.2e-07 62.0 98 37.8
CARHR269600 Cardamine hirsuta HOM05D000174 ORTHO05D000630 1.5e-07 61.6 162 32.1
Cpa.g.sc12.67 Carica papaya HOM05D000174 ORTHO05D000630 1.5e-07 61.6 160 31.9
CiPaw.13G145600 Carya illinoinensis HOM05D019813 ORTHO05D000630 1.5e-07 61.6 160 32.5
COL.COLO4_33268 Corchorus olitorius HOM05D008543 ORTHO05D000630 1.5e-07 61.6 106 38.7
QL07p014639 Quercus lobata HOM05D008543 ORTHO05D000630 1.5e-07 61.6 158 31.0
C09p47440 Brassica napus HOM05D000174 ORTHO05D000630 2.0e-07 61.2 84 42.9
Peaxi162Scf00106g00091 Petunia axillaris HOM05D001658 ORTHO05D001406 2.0e-07 61.2 119 32.8
ATR0730G014 Amborella trichopoda HOM05D010587 ORTHO05D000630 2.6e-07 60.8 350 25.7
MD11G1124800 Malus domestica HOM05D025829 ORTHO05D000630 2.6e-07 60.8 157 30.6
Oeu025927.1 Olea europaea HOM05D011325 ORTHO05D000630 2.6e-07 60.8 50 70.0
PSO675G1550 Papaver somniferum HOM05D000174 ORTHO05D000630 2.6e-07 60.8 214 25.7
HPP92_012301 Vanilla planifolia HOM05D001658 ORTHO05D001406 2.6e-07 60.8 110 31.8
Sabra16G0133300 Salix brachista HOM05D008543 ORTHO05D000630 4.4e-07 60.1 165 31.5
HPP92_018602 Vanilla planifolia HOM05D001658 ORTHO05D001406 4.4e-07 60.1 109 33.9
CARHR119210 Cardamine hirsuta HOM05D012084 ORTHO05D000630 5.7e-07 59.7 121 31.4
Sp4g08400 Schrenkiella parvula HOM05D012084 ORTHO05D000630 5.7e-07 59.7 102 33.3
Cc04_g15090 Coffea canephora HOM05D001658 ORTHO05D001406 7.5e-07 59.3 118 31.4
Thhalv10015446m.g Eutrema salsugineum HOM05D000174 ORTHO05D000630 7.5e-07 59.3 101 36.6
Lj9P469T55 Lonicera japonica HOM05D001658 ORTHO05D001406 7.5e-07 59.3 105 35.2
Nitab4.5_0025069g0010 Nicotiana tabacum HOM05D059491 ORTHO05D000630 7.5e-07 59.3 113 39.8
CARHR119110 Cardamine hirsuta HOM05D012084 ORTHO05D000630 9.8e-07 58.9 108 36.1
CiPaw.13G145500 Carya illinoinensis HOM05D008543 ORTHO05D000630 9.8e-07 58.9 132 32.6
Duzib170G0186 Durio zibethinus HOM05D008543 ORTHO05D000630 9.8e-07 58.9 314 29.0
THA.LOC104827413 Tarenaya hassleriana HOM05D012084 ORTHO05D000630 9.8e-07 58.9 110 33.6
VMungo0540G2495 Vigna mungo HOM05D022580 ORTHO05D000630 9.8e-07 58.9 104 36.5
Actinidia10593 Actinidia chinensis HOM05D000174 ORTHO05D000630 1.3e-06 58.5 292 28.1
Oeu062484.1 Olea europaea HOM05D001658 ORTHO05D001406 1.3e-06 58.5 118 33.9
Potri.001G224600 Populus trichocarpa HOM05D008543 ORTHO05D000630 1.3e-06 58.5 289 27.0
Sed0020081 Sechium edule HOM05D001658 ORTHO05D001406 1.3e-06 58.5 116 32.8
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 1.3e-06 58.5 163 28.2
QL01p020579 Quercus lobata HOM05D008543 ORTHO05D000630 1.7e-06 58.2 123 35.8
Lj1g0015020 Lotus japonicus HOM05D000003 ORTHO05D001406 2.2e-06 57.8 110 32.7
Lalb_Chr15g0080221 Lupinus albus HOM05D008543 ORTHO05D000630 2.2e-06 57.8 102 35.3
Phvul.006G020000 Phaseolus vulgaris HOM05D022580 ORTHO05D000630 2.2e-06 57.8 130 32.3
ATR1128G063 Amborella trichopoda HOM05D010587 ORTHO05D000630 2.8e-06 57.4 104 35.6
CANSAT54G2384 Cannabis sativa HOM05D008543 ORTHO05D000630 2.8e-06 57.4 95 36.8
Ca_12245_v3 Cicer arietinum L. HOM05D027424 ORTHO05D017834 2.8e-06 57.4 106 36.8
Aqoxy4G02266 Aquilegia oxysepala HOM05D000174 ORTHO05D000630 3.7e-06 57.0 285 28.1
Cpa.g.sc14.159 Carica papaya HOM05D001658 ORTHO05D001406 3.7e-06 57.0 107 34.6
Lj6g0021794 Lotus japonicus HOM05D000085 ORTHO05D015977 3.7e-06 57.0 99 35.4
arahy.Tifrunner.gnm1.ann1.1FA9DV Arachis hypogaea HOM05D008543 ORTHO05D000630 4.9e-06 56.6 368 24.5
ClCG07G007300 Citrullus lanatus HOM05D001658 ORTHO05D001406 4.9e-06 56.6 108 34.3
Ciclev10007805m.g Citrus clementina HOM05D000174 ORTHO05D000630 4.9e-06 56.6 115 30.4
unitig_26.g10291 Utricularia gibba HOM05D001658 ORTHO05D001406 4.9e-06 56.6 85 38.8
Manes.01G176050 Manihot esculenta HOM05D049795 ORTHO05D000630 6.3e-06 56.2 204 28.9
Ca_12258_v3 Cicer arietinum L. HOM05D027424 ORTHO05D022364 8.3e-06 55.8 106 36.8
Thhalv10007938m.g Eutrema salsugineum HOM05D001658 ORTHO05D001406 8.3e-06 55.8 86 37.2
Glyma.16G102000 Glycine max HOM05D008543 ORTHO05D000630 8.3e-06 55.8 210 27.1


User provided reference genes

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