Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 9.0e-57 223.4 116 100.0
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 3.8e-23 111.7 114 58.8
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 8.5e-23 110.5 128 48.4
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.1e-22 110.2 122 56.6
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 3.2e-22 108.6 99 60.6
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 5.5e-22 107.8 105 59.0
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 7.2e-22 107.5 100 60.0
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 7.2e-22 107.5 105 59.0
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 7.2e-22 107.5 98 61.2
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 9.4e-22 107.1 105 59.0
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 2.1e-21 105.9 105 59.0
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 3.6e-21 105.1 126 48.4
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 6.1e-21 104.4 105 56.2
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 6.1e-21 104.4 98 57.1
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 3.0e-20 102.1 103 58.3
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 4.0e-20 101.7 95 61.1
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 4.0e-20 101.7 117 51.3
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 5.2e-20 101.3 128 51.6
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 5.2e-20 101.3 91 61.5
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 5.2e-20 101.3 122 50.8
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 8.8e-20 100.5 88 65.9
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 2.6e-19 99.0 109 53.2
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 2.6e-19 99.0 124 51.6
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 2.6e-19 99.0 87 62.1
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 5.7e-19 97.8 123 52.0
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 5.7e-19 97.8 95 56.8
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 7.5e-19 97.4 122 52.5
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 1.7e-18 96.3 107 56.1
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.7e-18 96.3 122 48.4
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 3.7e-18 95.1 132 47.7
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 3.7e-18 95.1 145 42.8
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 8.3e-18 94.0 133 49.6
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 1.1e-17 93.6 115 45.2
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.4e-17 93.2 128 48.4
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 1.4e-17 93.2 128 48.4
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 1.8e-17 92.8 117 51.3
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.4e-17 92.4 99 53.5
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.4e-17 92.4 99 53.5
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 2.4e-17 92.4 107 50.5
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 2.4e-17 92.4 126 48.4
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 3.1e-17 92.0 116 47.4
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 3.1e-17 92.0 110 54.5
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 3.1e-17 92.0 113 53.1
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 3.1e-17 92.0 129 47.3
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 5.3e-17 91.3 117 50.4
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 5.3e-17 91.3 127 48.0
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 7.0e-17 90.9 128 47.7
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 9.1e-17 90.5 97 54.6
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 1.2e-16 90.1 90 53.3
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 1.2e-16 90.1 100 53.0
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 1.6e-16 89.7 104 49.0
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 3.5e-16 88.6 94 55.3
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 5.9e-16 87.8 131 44.3
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 7.7e-16 87.4 128 45.3
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 7.7e-16 87.4 94 54.3
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 7.7e-16 87.4 88 53.4
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 7.7e-16 87.4 96 53.1
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 1.0e-15 87.0 93 51.6
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 1.0e-15 87.0 103 47.6
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.0e-15 87.0 91 53.8
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 1.3e-15 86.7 99 49.5
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.3e-15 86.7 92 55.4
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 1.7e-15 86.3 94 54.3
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.7e-15 86.3 91 54.9
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 1.7e-15 86.3 119 42.9
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 2.2e-15 85.9 93 51.6
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 2.9e-15 85.5 95 54.7
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 3.8e-15 85.1 111 47.7
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 6.5e-15 84.3 130 45.4
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 8.5e-15 84.0 95 48.4
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 8.5e-15 84.0 91 53.8
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 8.5e-15 84.0 109 49.5
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.1e-14 83.6 97 48.5
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 1.5e-14 83.2 99 51.5
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.5e-14 83.2 96 47.9
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 1.5e-14 83.2 98 46.9
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.5e-14 83.2 97 48.5
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 1.5e-14 83.2 97 48.5
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 1.5e-14 83.2 98 46.9
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 1.5e-14 83.2 94 53.2
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 1.5e-14 83.2 117 44.4
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 1.9e-14 82.8 120 45.0
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 4.2e-14 81.6 91 48.4
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 4.2e-14 81.6 93 50.5
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.6e-13 79.7 127 40.9
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 1.6e-13 79.7 93 48.4
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 6.1e-13 77.8 94 48.9
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 1.4e-12 76.6 94 47.9
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 4.0e-12 75.1 124 41.9
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 4.0e-12 75.1 96 46.9
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 5.2e-12 74.7 123 39.8
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.7e-10 69.7 68 58.8
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 3.7e-10 68.6 65 58.5
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 5.4e-09 64.7 37 73.0
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 9.1e-09 63.9 103 43.7


User provided reference genes

Program Settings