Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032010.1 Olea europaea HOM05D001343 ORTHO05D007223 1.5e-97 359.8 219 100.0
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 6.3e-35 151.8 192 56.2
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 2.9e-32 142.9 196 56.6
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 2.5e-31 139.8 159 53.5
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 1.0e-29 134.4 196 58.2
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 1.8e-29 133.7 189 51.9
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 2.3e-29 133.3 180 53.9
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 5.2e-29 132.1 140 54.3
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 6.7e-29 131.7 190 52.6
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 2.6e-28 129.8 162 51.2
Migut.L00927 Erythranthe guttata HOM05D001343 ORTHO05D007223 5.7e-28 128.6 157 52.9
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 2.2e-27 126.7 196 56.6
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 1.1e-26 124.4 151 53.0
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 3.1e-26 122.9 180 50.6
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 1.2e-25 120.9 155 48.4
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 1.6e-25 120.6 159 51.6
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 4.5e-25 119.0 180 49.4
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 5.9e-25 118.6 120 58.3
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 7.7e-25 118.2 141 53.2
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 7.7e-25 118.2 196 55.6
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 1.0e-24 117.9 143 52.4
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 2.2e-24 116.7 132 54.5
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 5.0e-24 115.5 166 46.4
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 6.5e-24 115.2 125 55.2
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 8.5e-24 114.8 192 40.6
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 8.5e-24 114.8 140 50.7
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 1.5e-23 114.0 136 52.2
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 4.2e-23 112.5 159 47.2
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 9.4e-23 111.3 192 52.1
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 1.6e-22 110.5 170 51.2
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 3.6e-22 109.4 163 49.1
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 3.6e-22 109.4 140 47.1
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 1.0e-21 107.8 133 51.1
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 6.8e-21 105.1 133 51.9
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 8.8e-21 104.8 128 49.2
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 8.8e-21 104.8 156 45.5
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 1.5e-20 104.0 144 45.1
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 1.5e-20 104.0 177 46.3
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 2.6e-20 103.2 141 49.6
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 2.6e-20 103.2 133 49.6
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 3.4e-20 102.8 138 50.0
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 5.7e-20 102.1 167 46.7
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 5.7e-20 102.1 128 49.2
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 5.7e-20 102.1 133 46.6
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 9.8e-20 101.3 158 46.2
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 1.3e-19 100.9 130 49.2
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 1.3e-19 100.9 165 46.1
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 1.7e-19 100.5 128 48.4
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 1.7e-19 100.5 156 42.9
Cpa.g.sc1414.4 Carica papaya HOM05D001343 ORTHO05D007223 2.2e-19 100.1 126 53.2
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 2.2e-19 100.1 135 56.3
Psat2g150520 Pisum sativum HOM05D001343 ORTHO05D007223 4.8e-19 99.0 163 43.6
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 6.3e-19 98.6 134 48.5
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 6.3e-19 98.6 156 44.2
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 8.3e-19 98.2 161 44.1
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 1.4e-18 97.4 154 44.2
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 1.4e-18 97.4 138 46.4
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 4.1e-18 95.9 124 50.8
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 4.1e-18 95.9 162 41.4
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 4.1e-18 95.9 161 44.7
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 5.4e-18 95.5 166 47.6
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 9.1e-18 94.7 144 45.1
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 1.2e-17 94.4 161 43.5
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 1.2e-17 94.4 147 45.6
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 1.6e-17 94.0 167 44.9
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 1.6e-17 94.0 211 38.4
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 4.5e-17 92.4 109 50.5
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 5.9e-17 92.0 127 48.0
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 7.7e-17 91.7 157 44.6
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 1.7e-16 90.5 160 43.1
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 2.9e-16 89.7 135 45.9
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 2.9e-16 89.7 158 43.7
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 6.5e-16 88.6 137 44.5
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 6.5e-16 88.6 137 44.5
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 6.5e-16 88.6 153 44.4
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 1.5e-15 87.4 136 42.6
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 2.5e-15 86.7 160 43.1
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 3.2e-15 86.3 148 42.6
RcHm_v2.0_Chr6g0253501 Rosa chinensis HOM05D001343 ORTHO05D007223 1.6e-14 84.0 145 41.4
Aa31LG1G14520 Aethionema arabicum HOM05D001343 ORTHO05D007223 3.6e-14 82.8 130 43.1
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 3.6e-14 82.8 155 42.6
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 1.4e-13 80.9 130 40.8
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.8e-13 80.5 155 41.3
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 1.8e-13 80.5 140 40.7
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 3.0e-13 79.7 155 41.3
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 6.8e-13 78.6 155 41.3
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 4.4e-12 75.9 180 35.6
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 5.7e-12 75.5 106 50.0
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 5.7e-12 75.5 106 50.0
RcHm_v2.0_Chr2g0097581 Rosa chinensis HOM05D001343 ORTHO05D007223 9.8e-12 74.7 143 39.9
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 1.7e-11 73.9 129 41.1
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 2.2e-11 73.6 153 34.0
Actinidia26547 Actinidia chinensis HOM05D001343 ORTHO05D007223 4.9e-11 72.4 187 47.6
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 5.4e-10 68.9 192 44.3
RcHm_v2.0_Chr2g0097461 Rosa chinensis HOM05D001343 ORTHO05D007223 7.0e-10 68.6 143 38.5
CDE06G1191 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 2.0e-09 67.0 98 40.8
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 2.0e-09 67.0 107 43.0
AL472U10010 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 5.9e-09 65.5 142 35.2
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 5.9e-09 65.5 142 35.2
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 1.0e-08 64.7 122 38.5
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 1.3e-08 64.3 134 37.3
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 5.0e-08 62.4 127 35.4
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 8.6e-08 61.6 146 32.9
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 8.6e-08 61.6 110 36.4
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 8.6e-08 61.6 110 36.4
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 1.1e-07 61.2 127 34.6
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 1.1e-07 61.2 110 36.4
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 2.1e-06 57.0 107 40.2


User provided reference genes

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