Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.5e-60 236.1 129 100.0
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 6.3e-27 124.4 85 71.8
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 3.1e-26 122.1 85 71.8
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 7.0e-26 120.9 85 70.6
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 9.2e-26 120.6 85 71.8
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 1.2e-25 120.2 85 69.4
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 3.5e-25 118.6 85 71.8
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 7.8e-25 117.5 85 68.2
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 1.0e-24 117.1 85 67.1
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 3.8e-24 115.2 85 65.9
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 6.6e-24 114.4 85 67.1
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 6.6e-24 114.4 85 65.9
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 8.6e-24 114.0 85 65.9
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.5e-23 113.2 85 64.7
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 2.5e-23 112.5 85 64.7
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 3.3e-23 112.1 86 66.3
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 5.6e-23 111.3 85 64.7
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 9.5e-23 110.5 86 68.6
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 9.5e-23 110.5 86 68.6
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.6e-22 109.8 86 65.1
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 1.6e-22 109.8 86 67.4
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.6e-22 109.8 85 61.2
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 2.1e-22 109.4 82 68.3
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 3.6e-22 108.6 86 68.6
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 4.7e-22 108.2 85 62.4
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 6.1e-22 107.8 86 67.4
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 1.0e-21 107.1 82 63.4
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.0e-21 107.1 86 64.0
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.4e-21 106.7 86 64.0
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 2.3e-21 105.9 86 65.1
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 2.3e-21 105.9 86 62.8
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 2.3e-21 105.9 85 62.4
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 2.3e-21 105.9 86 62.8
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 3.0e-21 105.5 86 61.6
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 4.0e-21 105.1 86 64.0
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 5.2e-21 104.8 86 64.0
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 6.8e-21 104.4 86 66.3
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 8.9e-21 104.0 82 62.2
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.2e-20 103.6 82 61.0
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 1.2e-20 103.6 84 65.5
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.5e-20 103.2 86 61.6
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 2.0e-20 102.8 82 61.0
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 3.4e-20 102.1 86 62.8
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 3.4e-20 102.1 87 62.1
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 4.4e-20 101.7 87 62.1
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 5.7e-20 101.3 86 65.1
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 5.7e-20 101.3 87 60.9
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 7.5e-20 100.9 86 60.5
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 7.5e-20 100.9 86 60.5
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 9.8e-20 100.5 86 59.3
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.3e-19 100.1 86 59.3
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.3e-19 100.1 86 59.3
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.7e-19 99.8 132 48.5
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 2.9e-19 99.0 132 48.5
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 3.7e-19 98.6 86 57.0
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 6.4e-19 97.8 86 60.5
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 6.4e-19 97.8 86 57.0
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.8e-18 96.3 85 56.5
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 2.4e-18 95.9 78 61.5
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 2.4e-18 95.9 78 61.5
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.2e-18 95.5 85 56.5
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 5.4e-18 94.7 80 60.0
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 5.4e-18 94.7 81 60.5
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 9.2e-18 94.0 99 51.5
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.6e-17 93.2 84 57.1
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.0e-17 92.8 96 53.1
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 2.0e-17 92.8 86 53.5
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 2.7e-17 92.4 86 54.7
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 3.5e-17 92.0 78 61.5
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 5.9e-17 91.3 86 53.5
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 1.0e-16 90.5 81 58.0
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.0e-16 90.5 86 52.3
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 3.0e-16 89.0 86 53.5
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 3.0e-16 89.0 86 55.8
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 5.0e-16 88.2 81 53.1
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 8.6e-16 87.4 86 52.3
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 8.6e-16 87.4 86 52.3
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 8.6e-16 87.4 86 52.3
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 8.6e-16 87.4 86 52.3
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 8.6e-16 87.4 86 52.3
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 1.1e-15 87.0 124 44.4
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.1e-15 87.0 86 51.2
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 1.9e-15 86.3 83 53.0
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 4.3e-15 85.1 86 51.2
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 2.1e-14 82.8 79 51.9
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 2.8e-14 82.4 86 48.8
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 4.7e-14 81.6 86 50.0
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 1.1e-13 80.5 85 48.2
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 1.8e-13 79.7 114 43.9
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 5.2e-13 78.2 86 48.8
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 6.8e-13 77.8 161 34.8
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 1.2e-12 77.0 84 52.4
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 1.5e-12 76.6 51 70.6
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 7.5e-12 74.3 74 48.6
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.3e-11 73.6 86 43.0
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.7e-11 73.2 85 43.5
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 4.9e-11 71.6 57 59.6
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 6.0e-09 64.7 52 57.7
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.3e-08 63.5 52 57.7
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 3.9e-08 62.0 77 45.5
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 3.9e-08 62.0 55 54.5
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 5.0e-08 61.6 52 55.8
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 6.6e-08 61.2 57 54.4
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 1.5e-07 60.1 52 57.7
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.5e-07 59.3 52 53.8
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.5e-07 59.3 52 53.8
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 8.1e-06 54.3 92 37.0


User provided reference genes

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