Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031966.1 Olea europaea HOM05D003103 ORTHO05D003999 7.3e-115 417.2 198 100.0
SGA_v2.0_scaffold15G07323 Striga asiatica HOM05D003103 ORTHO05D003999 9.5e-107 390.2 196 93.9
Oeu062450.1 Olea europaea HOM05D003103 ORTHO05D003999 1.6e-106 389.4 198 93.4
MSTRG.15382 Avicennia marina HOM05D003103 ORTHO05D003999 4.7e-106 387.9 197 91.4
MSTRG.3431 Avicennia marina HOM05D003103 ORTHO05D003999 6.2e-106 387.5 198 90.4
Nitab4.5_0003519g0020 Nicotiana tabacum HOM05D003103 ORTHO05D003999 4.0e-105 384.8 198 90.9
Solyc03g044430.3 Solanum lycopersicum HOM05D003103 ORTHO05D003999 4.4e-104 381.3 198 89.9
Sopen03g008560 Solanum pennellii HOM05D003103 ORTHO05D003999 5.8e-104 380.9 198 89.9
PGSC0003DMG400004012 Solanum tuberosum HOM05D003103 ORTHO05D003999 7.5e-104 380.6 197 91.4
Actinidia12044 Actinidia chinensis HOM05D003103 ORTHO05D003999 9.8e-104 380.2 198 89.9
Solyc02g093290.3 Solanum lycopersicum HOM05D003103 ORTHO05D003999 9.8e-104 380.2 197 91.4
CAN.G370.47 Capsicum annuum HOM05D003103 ORTHO05D003999 1.3e-103 379.8 197 90.9
Haze_15380 Corylus avellana HOM05D003103 ORTHO05D003999 1.3e-103 379.8 198 89.9
Migut.H00421 Erythranthe guttata HOM05D003103 ORTHO05D003999 1.7e-103 379.4 197 91.4
Peaxi162Scf00685g00413 Petunia axillaris HOM05D003103 ORTHO05D003999 1.7e-103 379.4 198 89.9
Nn1g04803 Nelumbo nucifera HOM05D003103 ORTHO05D003999 2.2e-103 379.0 198 89.4
Nitab4.5_0002029g0060 Nicotiana tabacum HOM05D003103 ORTHO05D003999 2.9e-103 378.6 198 89.9
SalBow5G1645 Salvia bowleyana HOM05D003103 ORTHO05D003999 2.9e-103 378.6 197 89.8
Sopen02g037850 Solanum pennellii HOM05D003103 ORTHO05D003999 2.9e-103 378.6 197 90.9
SalBow5G5600 Salvia bowleyana HOM05D003103 ORTHO05D003999 3.7e-103 378.3 197 89.3
Cc07_g06120 Coffea canephora HOM05D003103 ORTHO05D003999 6.4e-103 377.5 197 90.9
Eucgr.I00907 Eucalyptus grandis HOM05D003103 ORTHO05D003999 6.4e-103 377.5 197 89.3
TAR381G0597 Trochodendron aralioides HOM05D003103 ORTHO05D003999 8.3e-103 377.1 198 89.4
CSS0011350 Camellia sinensis var. sinensis HOM05D003103 ORTHO05D003999 1.1e-102 376.7 198 89.4
Actinidia16477 Actinidia chinensis HOM05D003103 ORTHO05D003999 1.4e-102 376.3 198 87.9
Actinidia03793 Actinidia chinensis HOM05D003103 ORTHO05D003999 1.9e-102 375.9 198 88.9
Cfa004034 Carpinus fangiana HOM05D003103 ORTHO05D003999 1.9e-102 375.9 198 89.4
Dinv30000 Davidia involucrata HOM05D003103 ORTHO05D003999 2.4e-102 375.6 197 90.4
GSVIVG01022112001 Vitis vinifera HOM05D003103 ORTHO05D003999 2.4e-102 375.6 198 88.9
Aqoxy6G01280 Aquilegia oxysepala HOM05D003103 ORTHO05D003999 7.1e-102 374.0 198 87.9
CiPaw.01G016600 Carya illinoinensis HOM05D003103 ORTHO05D003999 7.1e-102 374.0 198 88.4
Lj7A70T83 Lonicera japonica HOM05D003103 ORTHO05D003999 7.1e-102 374.0 198 88.9
BcaC07g40987 Brassica carinata HOM05D003103 ORTHO05D003999 1.6e-101 372.9 198 88.4
C08p39890 Brassica napus HOM05D003103 ORTHO05D003999 1.6e-101 372.9 198 88.4
BolC8t51562H Brassica oleracea HOM05D003103 ORTHO05D003999 1.6e-101 372.9 198 88.4
QL06p040980 Quercus lobata HOM05D003103 ORTHO05D003999 2.1e-101 372.5 196 87.8
Ciclev10025298m.g Citrus clementina HOM05D003103 ORTHO05D003999 2.7e-101 372.1 198 89.4
Rhsim08G0099700 Rhododendron simsii HOM05D003103 ORTHO05D003999 2.7e-101 372.1 198 88.9
THA.LOC104819846 Tarenaya hassleriana HOM05D003103 ORTHO05D003999 2.7e-101 372.1 198 87.9
TPR.G19077 Trifolium pratense HOM05D003103 ORTHO05D003999 3.5e-101 371.7 196 89.3
BraA09t41085Z Brassica rapa HOM05D003103 ORTHO05D003999 4.6e-101 371.3 198 88.4
Ca_22156_v3 Cicer arietinum L. HOM05D003103 ORTHO05D003999 4.6e-101 371.3 196 89.3
Sp4g02410 Schrenkiella parvula HOM05D003103 ORTHO05D003999 4.6e-101 371.3 198 88.9
CAN.G11.2 Capsicum annuum HOM05D003103 ORTHO05D003999 6.0e-101 370.9 198 86.9
Cpa.g.sc55.133 Carica papaya HOM05D003103 ORTHO05D003999 7.8e-101 370.5 197 88.8
Gohir.D11G200400 Gossypium hirsutum HOM05D003103 ORTHO05D003999 7.8e-101 370.5 197 88.3
PGR102G2176 Punica granatum HOM05D003103 ORTHO05D003999 7.8e-101 370.5 198 87.9
A09p56930 Brassica napus HOM05D003103 ORTHO05D003999 1.0e-100 370.2 198 87.9
Potri.005G139800 Populus trichocarpa HOM05D003103 ORTHO05D003999 1.0e-100 370.2 198 88.4
vmacro17957 Vaccinium macrocarpon HOM05D003103 ORTHO05D003999 1.0e-100 370.2 198 88.4
CANSAT01G0334 Cannabis sativa HOM05D003103 ORTHO05D003999 1.7e-100 369.4 198 86.4
Lalb_Chr05g0226491 Lupinus albus HOM05D003103 ORTHO05D003999 1.7e-100 369.4 198 88.4
PSO675G0324 Papaver somniferum HOM05D003103 ORTHO05D003999 1.7e-100 369.4 198 87.4
Sabra05G0111200 Salix brachista HOM05D003103 ORTHO05D003999 1.7e-100 369.4 197 88.3
AL4G13330 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 2.3e-100 369.0 198 87.4
PSO541G2306 Papaver somniferum HOM05D003103 ORTHO05D003999 2.3e-100 369.0 198 86.9
Gohir.A11G193300 Gossypium hirsutum HOM05D003103 ORTHO05D003999 3.0e-100 368.6 197 87.8
Peaxi162Scf00450g00126 Petunia axillaris HOM05D003103 ORTHO05D003999 3.9e-100 368.2 209 84.7
TWI73G1128 Tripterygium wilfordii HOM05D003103 ORTHO05D003999 3.9e-100 368.2 198 87.4
CARHR293030 Cardamine hirsuta HOM05D003103 ORTHO05D003999 5.1e-100 367.9 198 87.4
Lalb_Chr16g0388671 Lupinus albus HOM05D003103 ORTHO05D003999 5.1e-100 367.9 198 87.9
arahy.Tifrunner.gnm1.ann1.6SC4JI Arachis hypogaea HOM05D003103 ORTHO05D003999 1.1e-99 366.7 198 87.9
Potri.007G045400 Populus trichocarpa HOM05D003103 ORTHO05D003999 1.1e-99 366.7 198 86.9
AT2G23420 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 1.5e-99 366.3 198 86.9
EL10Ac6g15729 Beta vulgaris HOM05D003103 ORTHO05D003999 1.5e-99 366.3 198 87.4
COL.COLO4_11442 Corchorus olitorius HOM05D003103 ORTHO05D003999 1.5e-99 366.3 197 86.8
Gorai.008G077200 Gossypium raimondii HOM05D003103 ORTHO05D003999 1.5e-99 366.3 198 86.9
Phvul.003G243000 Phaseolus vulgaris HOM05D003103 ORTHO05D003999 1.5e-99 366.3 198 86.9
Thecc.01G058700 Theobroma cacao HOM05D003103 ORTHO05D003999 1.5e-99 366.3 198 87.9
Aa31LG7G13580 Aethionema arabicum HOM05D003103 ORTHO05D003999 1.9e-99 365.9 198 87.4
Duzib147G0775 Durio zibethinus HOM05D003103 ORTHO05D003999 1.9e-99 365.9 198 86.9
Gorai.007G214700 Gossypium raimondii HOM05D003103 ORTHO05D003999 1.9e-99 365.9 198 87.9
VMungo0251G1095 Vigna mungo HOM05D003103 ORTHO05D003999 1.9e-99 365.9 198 85.9
Gohir.A12G072300 Gossypium hirsutum HOM05D003103 ORTHO05D003999 2.5e-99 365.5 198 86.9
HanXRQChr14g0449051 Helianthus annuus HOM05D003103 ORTHO05D003999 3.3e-99 365.2 198 84.3
MD15G1285500 Malus domestica HOM05D003103 ORTHO05D003999 3.3e-99 365.2 197 86.8
Gohir.D12G070200 Gossypium hirsutum HOM05D003103 ORTHO05D003999 4.3e-99 364.8 198 86.4
TWI09G1566 Tripterygium wilfordii HOM05D003103 ORTHO05D003999 4.3e-99 364.8 198 85.4
Duzib264G0053 Durio zibethinus HOM05D003103 ORTHO05D003999 5.6e-99 364.4 197 87.3
Atru.chr3.305 Acer truncatum HOM05D003103 ORTHO05D003999 7.3e-99 364.0 196 87.2
DCAR_010882 Daucus carota HOM05D003103 ORTHO05D003999 7.3e-99 364.0 197 87.3
Ca_24758_v3 Cicer arietinum L. HOM05D003103 ORTHO05D003999 9.5e-99 363.6 198 87.4
Thhalv10000109m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 1.2e-98 363.2 198 86.9
HanXRQChr07g0187961 Helianthus annuus HOM05D003103 ORTHO05D003999 1.2e-98 363.2 196 84.7
Hund13545 Selenicereus undatus HOM05D003103 ORTHO05D003999 1.2e-98 363.2 197 85.8
BcaNung05429 Brassica carinata HOM05D003103 ORTHO05D003999 1.6e-98 362.8 198 85.9
MD02G1174500 Malus domestica HOM05D003103 ORTHO05D003999 1.6e-98 362.8 197 85.8
Nn5g30339 Nelumbo nucifera HOM05D003103 ORTHO05D003999 1.6e-98 362.8 198 85.4
Glyma.05G094000 Glycine max HOM05D003103 ORTHO05D003999 2.1e-98 362.5 198 85.9
Sabra07G0040400 Salix brachista HOM05D003103 ORTHO05D003999 2.1e-98 362.5 196 86.7
HPP92_025020 Vanilla planifolia HOM05D003103 ORTHO05D003999 2.1e-98 362.5 198 86.4
HPP92_025048 Vanilla planifolia HOM05D003103 ORTHO05D003999 2.1e-98 362.5 198 86.4
Ah.03g145520 Amaranthus hybridus HOM05D003103 ORTHO05D003999 2.8e-98 362.1 197 85.8
Psat4g086400 Pisum sativum HOM05D003103 ORTHO05D003999 2.8e-98 362.1 196 86.7
ATR0584G122 Amborella trichopoda HOM05D003103 ORTHO05D003999 3.6e-98 361.7 198 84.8
Sed0023462 Sechium edule HOM05D003103 ORTHO05D003999 3.6e-98 361.7 198 86.4
Thhalv10024704m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 4.7e-98 361.3 198 85.9
Os03g0837300 Oryza sativa ssp. japonica HOM05D003103 ORTHO05D003999 4.7e-98 361.3 198 85.4
Carub.0004s0262 Capsella rubella HOM05D003103 ORTHO05D003999 6.2e-98 360.9 198 86.4
CARHR245570 Cardamine hirsuta HOM05D003103 ORTHO05D003999 6.2e-98 360.9 198 85.4
Sc03g0001680 Simmondsia chinensis HOM05D003103 ORTHO05D003999 6.2e-98 360.9 198 85.9
AL7G13700 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 8.1e-98 360.5 198 85.4
AT4G36940 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 1.1e-97 360.1 198 84.8
A03p64960 Brassica napus HOM05D003103 ORTHO05D003999 1.1e-97 360.1 198 85.4
C07p62250 Brassica napus HOM05D003103 ORTHO05D003999 1.1e-97 360.1 198 85.4
BolC7t46641H Brassica oleracea HOM05D003103 ORTHO05D003999 1.1e-97 360.1 198 85.4
BraA03t15555Z Brassica rapa HOM05D003103 ORTHO05D003999 1.1e-97 360.1 198 85.4
ClCG02G012340 Citrullus lanatus HOM05D003103 ORTHO05D003999 1.1e-97 360.1 198 85.9
ECA238G1051 Erigeron canadensis HOM05D003103 ORTHO05D003999 1.1e-97 360.1 196 85.2
FAN26G0572 Fragaria x ananassa HOM05D003103 ORTHO05D003999 1.1e-97 360.1 196 87.2
FAN28G1880 Fragaria x ananassa HOM05D003103 ORTHO05D003999 1.1e-97 360.1 196 87.2
Medtr4g094805 Medicago truncatula HOM05D003103 ORTHO05D003999 1.1e-97 360.1 196 86.2
RcHm_v2.0_Chr2g0105921 Rosa chinensis HOM05D003103 ORTHO05D003999 1.1e-97 360.1 196 87.2
Prupe.7G131500 Prunus persica HOM05D003103 ORTHO05D003999 2.3e-97 359.0 197 85.3
Sp7g34830 Schrenkiella parvula HOM05D003103 ORTHO05D003999 2.3e-97 359.0 198 85.4
Sed0020253 Sechium edule HOM05D003103 ORTHO05D003999 2.3e-97 359.0 198 85.9
Aa31LG6G14040 Aethionema arabicum HOM05D003103 ORTHO05D003999 3.1e-97 358.6 198 84.8
Carub.0007s0312 Capsella rubella HOM05D003103 ORTHO05D003999 3.1e-97 358.6 198 84.8
MELO3C020858.2 Cucumis melo HOM05D003103 ORTHO05D003999 3.1e-97 358.6 198 86.4
Lj4g0002336 Lotus japonicus HOM05D003103 ORTHO05D003999 3.1e-97 358.6 196 86.7
Medtr5g017050 Medicago truncatula HOM05D003103 ORTHO05D003999 3.1e-97 358.6 198 86.9
CsaV3_2G016480 Cucumis sativus L. HOM05D003103 ORTHO05D003999 4.0e-97 358.2 198 86.4
Psat2g166720 Pisum sativum HOM05D003103 ORTHO05D003999 4.0e-97 358.2 198 86.9
HanXRQChr12g0381311 Helianthus annuus HOM05D003103 ORTHO05D003999 6.8e-97 357.5 196 84.7
RcHm_v2.0_Chr7g0236011 Rosa chinensis HOM05D003103 ORTHO05D003999 8.9e-97 357.1 196 86.7
Glyma.17G172500 Glycine max HOM05D003103 ORTHO05D003999 1.5e-96 356.3 198 84.8
FAN23G0049 Fragaria x ananassa HOM05D003103 ORTHO05D003999 2.0e-96 355.9 193 87.0
arahy.Tifrunner.gnm1.ann1.N9FI25 Arachis hypogaea HOM05D003103 ORTHO05D003999 3.4e-96 355.1 198 86.4
arahy.Tifrunner.gnm1.ann1.TC99UD Arachis hypogaea HOM05D003103 ORTHO05D003999 3.4e-96 355.1 198 86.4
ECA246G4532 Erigeron canadensis HOM05D003103 ORTHO05D003999 7.6e-96 354.0 196 85.2
Glyma.01G187500 Glycine max HOM05D003103 ORTHO05D003999 9.9e-96 353.6 198 84.3
arahy.Tifrunner.gnm1.ann1.Q9CK1R Arachis hypogaea HOM05D003103 ORTHO05D003999 2.2e-95 352.4 195 84.6
arahy.Tifrunner.gnm1.ann1.WH2MYH Arachis hypogaea HOM05D003103 ORTHO05D003999 2.2e-95 352.4 195 84.6
SEGI_29401 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 8.4e-95 350.5 198 82.3
AUR62001914 Chenopodium quinoa HOM05D003103 ORTHO05D003999 1.4e-94 349.7 198 83.8
VMungo1215G3025 Vigna mungo HOM05D003103 ORTHO05D003999 1.9e-94 349.4 198 82.8
TPR.G26868 Trifolium pratense HOM05D003103 ORTHO05D003999 5.4e-94 347.8 221 77.4
Phvul.002G017800 Phaseolus vulgaris HOM05D003103 ORTHO05D003999 9.2e-94 347.1 197 82.2
Zm00001eb082870 Zea mays HOM05D003103 ORTHO05D003999 4.6e-93 344.7 198 81.8
HPP92_009260 Vanilla planifolia HOM05D003103 ORTHO05D003999 6.0e-93 344.4 197 79.7
Os04g0429800 Oryza sativa ssp. japonica HOM05D003103 ORTHO05D003999 3.0e-92 342.0 198 80.3
CSS0023497 Camellia sinensis var. sinensis HOM05D003103 ORTHO05D003999 5.1e-92 341.3 184 86.4
Hund16344 Selenicereus undatus HOM05D003103 ORTHO05D003999 4.3e-91 338.2 198 82.3
Mapoly0013s0004 Marchantia polymorpha HOM05D003103 ORTHO05D003999 2.4e-89 332.4 198 74.7
SMO358G0676 Selaginella moellendorffii HOM05D003103 ORTHO05D003999 5.2e-89 331.3 196 76.0
Nitab4.5_0001064g0060 Nicotiana tabacum HOM05D003103 ORTHO05D003999 2.6e-88 328.9 173 88.4
Mapoly0010s0215 Marchantia polymorpha HOM05D003103 ORTHO05D003999 1.7e-87 326.2 198 73.2
Lsat_1_v5_gn_3_89301 Lactuca sativa HOM05D003103 ORTHO05D003999 3.8e-87 325.1 178 85.4
Lj4C151G10 Lonicera japonica HOM05D003103 ORTHO05D003999 1.4e-86 323.2 196 80.6
AagrBONN_evm.TU.Sc2ySwM_344.1320 Anthoceros agrestis HOM05D003103 ORTHO05D003999 2.3e-84 315.8 194 73.7
Pp3c24_5980 Physcomitrium patens HOM05D003103 ORTHO05D003999 5.6e-83 311.2 196 74.0
Lsat_1_v5_gn_2_84981 Lactuca sativa HOM05D003103 ORTHO05D003999 7.3e-83 310.8 170 84.1
RcHm_v2.0_Chr1g0342971 Rosa chinensis HOM05D003103 ORTHO05D003999 8.1e-82 307.4 176 81.2
unitig_899.g14947 Utricularia gibba HOM05D003103 ORTHO05D003999 3.8e-79 298.5 157 87.9
Zm00001eb422480 Zea mays HOM05D003103 ORTHO05D003999 8.4e-79 297.4 198 73.2
Lalb_Chr09g0323241 Lupinus albus HOM05D003103 ORTHO05D003999 1.6e-77 293.1 173 80.3
Nitab4.5_0002646g0010 Nicotiana tabacum HOM05D003103 ORTHO05D003999 1.3e-74 283.5 190 74.2
PRCOL_00006024 Prasinoderma coloniale HOM05D003103 ORTHO05D003999 4.6e-69 265.0 198 62.6
arahy.Tifrunner.gnm1.ann1.556YNA Arachis hypogaea HOM05D003103 ORTHO05D003999 1.5e-64 250.0 132 88.6
FvH4_1g16212 Fragaria vesca HOM05D003103 ORTHO05D003999 1.5e-64 250.0 130 89.2
MCO01G563 Micromonas commoda HOM05D003103 ORTHO05D003999 2.2e-63 246.1 197 59.4
SMO143G0022 Selaginella moellendorffii HOM05D003103 ORTHO05D003999 2.9e-63 245.7 205 59.0
CBR_g54876 Chara braunii HOM05D003103 ORTHO05D003999 5.7e-51 204.9 141 63.1
SGA_v2.0_scaffold62G21520 Striga asiatica HOM05D003103 ORTHO05D003999 8.5e-47 191.0 97 91.8
Manes.12G104000 Manihot esculenta HOM05D003103 ORTHO05D003999 3.2e-46 189.1 106 84.0
Haze_26099 Corylus avellana HOM05D003103 ORTHO05D003999 5.5e-46 188.3 172 50.6
SEGI_07299 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 7.2e-46 188.0 105 84.8
arahy.Tifrunner.gnm1.ann1.LT9345 Arachis hypogaea HOM05D003103 ORTHO05D003999 1.4e-44 183.7 176 57.4
Zm00001eb063870 Zea mays HOM05D003103 ORTHO05D003999 2.0e-43 179.9 98 87.8
CDE08G1207 Ceratophyllum demersum HOM05D003103 ORTHO05D003999 1.4e-41 173.7 98 82.7
CDE08G1507 Ceratophyllum demersum HOM05D003103 ORTHO05D000386 3.0e-36 156.0 86 81.4
HanXRQChr16g0531001 Helianthus annuus HOM05D003103 ORTHO05D003999 2.0e-24 116.7 66 81.8
Lsat_1_v5_gn_3_76520 Lactuca sativa HOM05D003103 ORTHO05D003999 1.8e-20 103.6 58 86.2
Lsat_1_v5_gn_6_68940 Lactuca sativa HOM05D003103 ORTHO05D232577 1.3e-15 87.4 54 72.2
CBR_g54871 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-13 80.9 58 62.1


User provided reference genes

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