Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 3.7e-77 291.6 160 100.0
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 2.9e-61 238.8 162 85.2
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 1.1e-33 147.1 160 56.9
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 1.3e-32 143.7 153 56.2
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 2.1e-32 142.9 159 57.9
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 2.1e-32 142.9 159 57.9
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 2.1e-32 142.9 153 56.2
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 6.2e-32 141.4 159 52.8
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 1.8e-31 139.8 154 53.9
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 1.8e-31 139.8 154 55.2
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 2.4e-31 139.4 158 54.4
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 2.4e-31 139.4 157 54.1
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 5.3e-31 138.3 155 54.8
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 9.0e-31 137.5 156 56.4
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 1.2e-30 137.1 159 52.8
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 1.5e-30 136.7 156 53.8
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.5e-30 136.7 151 55.0
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 2.0e-30 136.3 154 53.2
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 2.6e-30 136.0 153 56.9
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 2.6e-30 136.0 156 57.7
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 3.4e-30 135.6 154 56.5
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 4.5e-30 135.2 158 51.9
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 4.5e-30 135.2 157 54.8
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 4.5e-30 135.2 158 54.4
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 5.8e-30 134.8 155 54.2
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 5.8e-30 134.8 158 55.7
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 7.6e-30 134.4 160 53.1
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 7.6e-30 134.4 156 54.5
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 7.6e-30 134.4 175 48.6
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 2.9e-29 132.5 155 51.6
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 3.8e-29 132.1 158 52.5
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 4.9e-29 131.7 153 50.3
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 6.4e-29 131.3 155 51.0
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 8.4e-29 131.0 160 55.6
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 8.4e-29 131.0 156 55.8
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 8.4e-29 131.0 158 54.4
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 1.1e-28 130.6 161 54.7
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 1.9e-28 129.8 159 49.1
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 1.9e-28 129.8 160 51.9
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 4.2e-28 128.6 150 52.7
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 4.2e-28 128.6 153 51.0
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 4.2e-28 128.6 159 49.7
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 7.1e-28 127.9 151 53.0
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 9.3e-28 127.5 148 52.7
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 1.6e-27 126.7 163 54.0
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 1.6e-27 126.7 155 52.9
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 1.6e-27 126.7 159 54.7
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 2.1e-27 126.3 156 50.6
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 2.1e-27 126.3 156 50.0
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 7.9e-27 124.4 159 52.8
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 1.8e-26 123.2 163 50.9
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 1.8e-26 123.2 156 48.7
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 2.3e-26 122.9 159 49.7
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 3.0e-26 122.5 153 51.6
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 5.1e-26 121.7 155 51.6
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 5.1e-26 121.7 164 48.8
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 6.7e-26 121.3 161 50.9
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 1.1e-25 120.6 157 47.8
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 5.6e-25 118.2 163 45.4
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 5.6e-25 118.2 157 46.5
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 5.6e-25 118.2 154 48.7
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 2.1e-24 116.3 160 46.2
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 2.8e-24 115.9 172 43.6
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 4.8e-24 115.2 156 50.6
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 6.2e-24 114.8 152 47.4
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 1.4e-23 113.6 165 45.5
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.8e-23 113.2 156 47.4
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.8e-23 113.2 156 47.4
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 1.8e-23 113.2 160 46.2
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 1.8e-23 113.2 159 44.7
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 1.8e-23 113.2 155 45.8
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 2.4e-23 112.8 153 49.0
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 3.1e-23 112.5 163 49.7
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 5.3e-23 111.7 170 47.1
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 9.0e-23 110.9 157 48.4
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 1.2e-22 110.5 162 48.1
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 3.4e-22 109.0 166 43.4
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 3.4e-22 109.0 158 45.6
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 3.4e-22 109.0 157 49.0
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 1.3e-21 107.1 157 43.3
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 1.3e-21 107.1 155 46.5
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 1.7e-21 106.7 155 44.5
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 2.2e-21 106.3 158 44.3
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 2.2e-21 106.3 152 43.4
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 1.4e-20 103.6 164 44.5
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 4.2e-20 102.1 151 41.7
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 9.3e-20 100.9 157 42.0
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 7.9e-19 97.8 154 42.9
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 7.9e-19 97.8 158 45.6
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 1.0e-18 97.4 160 44.4
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 1.0e-18 97.4 160 44.4
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 1.3e-18 97.1 153 45.8
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 3.0e-18 95.9 157 45.9
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 3.0e-18 95.9 152 42.8
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 5.1e-18 95.1 154 46.8
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.5e-17 93.6 154 46.1
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.9e-17 93.2 159 43.4
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 3.3e-17 92.4 154 46.1
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 7.4e-17 91.3 157 44.6
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 7.4e-17 91.3 157 44.6
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 9.6e-17 90.9 157 44.6
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 1.3e-16 90.5 119 49.6
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 2.1e-16 89.7 157 43.9
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 2.1e-16 89.7 157 43.9
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 2.1e-16 89.7 157 44.6
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 2.8e-16 89.4 157 43.9
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 2.8e-16 89.4 157 43.9
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 2.8e-16 89.4 157 43.9
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 2.8e-16 89.4 157 43.9
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 2.8e-16 89.4 151 41.1
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 3.7e-16 89.0 153 40.5
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 4.8e-16 88.6 151 41.7
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 4.8e-16 88.6 157 43.3
Sp6g19460 Schrenkiella parvula HOM05D004507 ORTHO05D004874 4.8e-16 88.6 151 42.4
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 6.2e-16 88.2 152 42.1
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 8.2e-16 87.8 157 43.9
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 8.2e-16 87.8 157 43.9
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 8.2e-16 87.8 156 45.5
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 1.1e-15 87.4 159 40.9
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 1.1e-15 87.4 153 39.9
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.4e-15 87.0 160 42.5
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.4e-15 87.0 152 40.8
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.4e-15 87.0 162 40.1
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.4e-15 87.0 150 40.0
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 5.3e-15 85.1 160 43.1
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 1.5e-14 83.6 151 43.0
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 3.4e-14 82.4 150 40.7
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 5.8e-14 81.6 160 39.4
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 1.7e-13 80.1 151 37.1
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 1.7e-13 80.1 166 34.9
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 2.2e-13 79.7 159 39.0
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 2.9e-13 79.3 160 40.6
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 2.9e-13 79.3 160 40.6
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 6.5e-13 78.2 160 40.0
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 6.5e-13 78.2 160 40.0
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 8.4e-13 77.8 150 42.0
Solyc07g006310.1 Solanum lycopersicum HOM05D004507 ORTHO05D004874 1.4e-12 77.0 49 81.6
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 2.5e-12 76.3 160 39.4
SEGI_26334 Sequoiadendron giganteum HOM05D000047 ORTHO05D000044 7.1e-12 74.7 157 33.1
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 2.3e-10 69.7 156 34.0
Os02g0178700 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 3.9e-10 68.9 149 34.2
ClCG11G012600 Citrullus lanatus HOM05D004507 ORTHO05D004874 6.7e-10 68.2 140 37.9
Cc06_g14060 Coffea canephora HOM05D004507 ORTHO05D004874 1.9e-09 66.6 155 34.8
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 5.7e-09 65.1 54 64.8
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 7.4e-09 64.7 152 34.2
SEGI_39312 Sequoiadendron giganteum HOM05D004507 ORTHO05D004874 7.4e-09 64.7 155 32.9
Os02g0791300 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 9.7e-09 64.3 148 33.8
SEGI_00160 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 2.8e-08 62.8 166 32.5
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 4.8e-08 62.0 150 32.7
Zm00001eb192600 Zea mays HOM05D004507 ORTHO05D004874 2.4e-07 59.7 172 32.0
SEGI_14977 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 5.3e-07 58.5 164 31.1
Zm00001eb389070 Zea mays HOM05D004507 ORTHO05D004874 9.0e-07 57.8 160 28.1
HPP92_015856 Vanilla planifolia HOM05D004507 ORTHO05D004874 1.2e-06 57.4 130 34.6
SHI24759 Sapria himalayana HOM05D016562 ORTHO05D004874 2.0e-06 56.6 41 65.9
SEGI_25117 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 2.0e-06 56.6 163 33.1
Zm00001eb233860 Zea mays HOM05D004507 ORTHO05D004874 2.0e-06 56.6 60 45.0
Zm00001eb178020 Zea mays HOM05D004507 ORTHO05D004874 2.6e-06 56.2 149 28.2
SEGI_09603 Sequoiadendron giganteum HOM05D001624 ORTHO05D008636 3.4e-06 55.8 148 30.4
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 5.9e-06 55.1 130 32.3


User provided reference genes

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