Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 2.4e-237 825.1 413 100.0
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 1.9e-189 666.0 398 84.2
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 5.7e-170 601.3 392 75.0
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 7.4e-170 600.9 389 74.3
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 1.8e-168 596.3 390 74.1
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 2.4e-168 595.9 389 73.8
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 9.0e-168 594.0 393 72.3
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 2.6e-167 592.4 389 73.5
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 1.7e-166 589.7 392 71.9
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 2.9e-166 589.0 394 72.6
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 7.2e-165 584.3 381 73.8
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 7.2e-165 584.3 390 72.3
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 3.6e-164 582.0 391 71.9
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.4e-163 580.1 391 71.4
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 2.3e-163 579.3 391 72.6
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 3.0e-163 578.9 390 71.0
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 3.9e-163 578.6 394 70.1
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 3.9e-163 578.6 390 72.1
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 5.1e-163 578.2 391 72.1
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 1.5e-162 576.6 375 74.4
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 9.7e-162 573.9 390 70.5
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.7e-161 573.2 390 71.3
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 2.2e-161 572.8 390 72.1
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 3.7e-161 572.0 393 71.2
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 8.2e-161 570.9 391 70.1
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 8.2e-161 570.9 392 69.4
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 1.8e-160 569.7 391 70.6
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 2.4e-160 569.3 390 71.8
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 3.1e-160 568.9 390 71.0
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 4.1e-160 568.5 390 71.3
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 5.9e-159 564.7 390 70.5
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 1.3e-158 563.5 391 71.1
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 6.5e-158 561.2 389 70.4
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 1.1e-157 560.5 373 73.2
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 4.2e-157 558.5 393 67.9
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 5.5e-157 558.1 390 69.7
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 9.4e-157 557.4 391 68.0
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 3.6e-156 555.4 397 65.7
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 4.7e-156 555.1 390 69.0
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 6.1e-156 554.7 390 68.5
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 6.1e-156 554.7 390 70.3
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 7.9e-156 554.3 393 67.4
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 2.3e-155 552.7 390 68.5
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 3.0e-155 552.4 394 68.3
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 1.5e-154 550.1 397 65.5
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 3.3e-154 548.9 391 67.5
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 3.3e-154 548.9 390 70.8
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 1.3e-153 547.0 391 67.5
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 1.7e-153 546.6 390 66.7
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 2.8e-153 545.8 394 68.5
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 2.8e-153 545.8 377 70.8
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 2.8e-153 545.8 389 67.9
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 3.7e-153 545.4 401 67.6
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 6.3e-153 544.7 394 66.5
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 1.8e-152 543.1 392 67.9
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 1.6e-151 540.0 368 71.7
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 3.5e-151 538.9 396 64.9
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 7.7e-151 537.7 373 71.8
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 3.8e-150 535.4 399 66.4
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 6.5e-150 534.6 389 67.6
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 1.1e-149 533.9 394 65.7
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 3.2e-149 532.3 391 65.7
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 4.2e-149 531.9 390 67.2
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 5.5e-149 531.6 389 67.4
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 9.4e-149 530.8 392 66.6
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 1.6e-148 530.0 391 66.5
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 2.7e-148 529.3 395 66.3
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 3.6e-148 528.9 367 70.0
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 4.7e-148 528.5 392 66.3
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 6.1e-148 528.1 389 64.8
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 8.0e-148 527.7 392 66.3
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 3.0e-147 525.8 389 65.8
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 4.0e-147 525.4 389 65.3
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 8.8e-147 524.2 390 64.9
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 2.0e-146 523.1 397 65.0
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 4.4e-146 521.9 397 64.2
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 7.5e-146 521.2 396 64.9
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 2.8e-145 519.2 397 65.2
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 8.2e-145 517.7 399 65.2
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 3.1e-144 515.8 403 63.8
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 1.6e-143 513.5 410 62.9
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 2.0e-143 513.1 382 67.3
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 4.5e-143 511.9 382 66.0
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 1.0e-142 510.8 390 66.7
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 1.7e-142 510.0 392 64.3
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 8.5e-142 507.7 401 64.3
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 1.1e-141 507.3 410 62.0
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 2.7e-140 502.7 376 67.3
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 4.0e-139 498.8 367 67.0
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 5.7e-138 495.0 400 62.0
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 4.5e-135 485.3 374 64.2
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 5.0e-134 481.9 373 63.8
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 1.2e-132 477.2 404 58.2
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 5.2e-131 471.9 389 59.9
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 2.0e-130 469.9 402 57.7
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 7.5e-130 468.0 389 63.2
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 3.5e-127 459.1 314 72.0
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 2.5e-125 453.0 412 55.1
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 1.3e-118 430.6 298 69.1
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 2.3e-118 429.9 420 51.4
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 3.0e-118 429.5 387 57.1
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 2.9e-113 412.9 282 69.5
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 4.1e-112 409.1 380 56.6
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 1.5e-109 400.6 418 49.5
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 1.5e-109 400.6 418 49.5
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 2.5e-101 373.2 367 50.4
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 2.4e-91 340.1 383 50.7
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 8.9e-91 338.2 253 65.6
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 2.1e-84 317.0 264 59.8
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 2.4e-80 303.5 198 74.7
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 7.9e-79 298.5 319 53.3
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.4e-75 287.7 237 59.1
Glyma.17G068567 Glycine max HOM05D005919 ORTHO05D007176 6.3e-60 235.7 189 60.8
arahy.Tifrunner.gnm1.ann1.8I3VMK Arachis hypogaea HOM05D005919 ORTHO05D007176 2.2e-57 227.3 200 57.0
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 3.7e-52 209.9 329 37.4
Sabra18G0085400 Salix brachista HOM05D005919 ORTHO05D007176 4.1e-51 206.5 139 70.5
CDE02G3325 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 4.4e-45 186.4 122 66.4
GSVIVG01023746001 Vitis vinifera HOM05D005919 ORTHO05D007176 2.2e-33 147.5 90 72.2
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 7.5e-29 132.5 404 28.5
Zm00001eb050560 Zea mays HOM05D005919 ORTHO05D007176 3.1e-27 127.1 107 58.9
Zm00001eb260780 Zea mays HOM05D005919 ORTHO05D007176 3.1e-27 127.1 107 58.9
Zm00001eb302550 Zea mays HOM05D005919 ORTHO05D007176 3.1e-27 127.1 107 58.9
Actinidia15384 Actinidia chinensis HOM05D005919 ORTHO05D007176 5.9e-26 122.9 89 60.7
AL1G16380 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 8.0e-23 112.5 79 67.1
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 8.3e-20 102.4 102 56.9
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 1.6e-15 88.2 94 57.4
SMO145G0125 Selaginella moellendorffii HOM05D009274 ORTHO05D011512 2.3e-09 67.8 44 65.9
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 3.6e-07 60.5 219 26.9
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 4.7e-07 60.1 115 29.6
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 4.0e-06 57.0 205 26.8
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 4.0e-06 57.0 207 26.6
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 4.0e-06 57.0 207 26.6
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 6.8e-06 56.2 194 27.8
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 8.9e-06 55.8 213 24.9
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 8.9e-06 55.8 211 25.6


User provided reference genes

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