Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 1.6e-126 456.1 219 100.0
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 1.9e-100 369.4 214 81.8
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 3.3e-100 368.6 214 79.0
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 5.6e-100 367.9 216 80.1
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 1.2e-99 366.7 216 76.4
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 2.1e-99 365.9 217 77.9
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 1.1e-98 363.6 217 77.0
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 1.2e-97 360.1 213 77.0
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 2.6e-97 359.0 217 77.4
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 7.6e-97 357.5 217 74.2
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 1.3e-96 356.7 217 74.2
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 1.7e-96 356.3 207 77.8
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 2.9e-96 355.5 216 75.9
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 2.9e-96 355.5 216 75.9
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 2.9e-96 355.5 215 74.4
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 8.4e-96 354.0 217 74.2
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 8.4e-96 354.0 217 73.7
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 8.4e-96 354.0 207 75.8
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 1.9e-95 352.8 207 76.3
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 2.4e-95 352.4 216 75.5
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 4.1e-95 351.7 207 76.3
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 5.4e-95 351.3 216 74.5
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 7.1e-95 350.9 217 73.7
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 9.2e-95 350.5 218 75.2
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 1.2e-94 350.1 217 72.8
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 1.6e-94 349.7 217 74.7
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 2.1e-94 349.4 207 75.8
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 2.7e-94 349.0 217 75.1
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 3.5e-94 348.6 207 76.3
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 1.3e-93 346.7 216 73.6
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 6.6e-93 344.4 217 72.4
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 1.5e-92 343.2 217 72.4
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 1.9e-92 342.8 217 74.7
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 2.5e-92 342.4 216 73.6
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 2.5e-92 342.4 205 75.6
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 3.3e-92 342.0 216 72.7
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 3.3e-92 342.0 218 72.9
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 4.3e-92 341.7 216 72.2
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 9.6e-92 340.5 214 73.4
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 9.6e-92 340.5 217 71.4
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 9.6e-92 340.5 216 71.3
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 1.6e-91 339.7 216 72.7
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 2.8e-91 339.0 213 75.1
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 2.8e-91 339.0 218 71.1
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 3.6e-91 338.6 217 71.0
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 4.7e-91 338.2 217 71.4
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 6.2e-91 337.8 207 74.4
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 8.1e-91 337.4 217 71.0
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 8.1e-91 337.4 207 73.9
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 1.1e-90 337.0 212 72.2
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 1.1e-90 337.0 217 70.5
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 1.4e-90 336.7 217 69.1
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 1.4e-90 336.7 207 73.9
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 1.8e-90 336.3 215 71.2
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 2.4e-90 335.9 217 68.7
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 2.4e-90 335.9 217 71.0
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 2.4e-90 335.9 217 71.0
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 8.9e-90 334.0 212 70.8
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 8.9e-90 334.0 216 71.3
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 1.5e-89 333.2 207 74.4
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 1.5e-89 333.2 217 72.4
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 1.5e-89 333.2 217 70.5
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.6e-89 332.4 212 70.8
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 4.4e-89 331.6 207 72.5
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 4.4e-89 331.6 207 71.5
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 1.7e-88 329.7 217 70.0
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 1.7e-88 329.7 217 72.8
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 1.7e-88 329.7 211 70.6
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.2e-88 329.3 207 72.5
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 2.9e-88 328.9 217 70.0
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 2.9e-88 328.9 217 68.7
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 2.4e-87 325.9 219 68.9
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 4.2e-87 325.1 217 68.7
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.2e-86 323.6 216 68.1
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 2.1e-86 322.8 213 70.9
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 2.7e-86 322.4 217 68.2
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 1.0e-85 320.5 217 69.1
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 1.3e-85 320.1 208 69.7
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 1.3e-85 320.1 217 68.2
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 1.7e-85 319.7 217 68.7
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.5e-84 315.8 218 65.1
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 3.3e-84 315.5 248 60.5
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 3.3e-84 315.5 207 70.5
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 5.6e-84 314.7 191 74.9
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 5.6e-84 314.7 213 68.5
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 1.6e-83 313.2 217 66.4
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 3.6e-83 312.0 217 66.4
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 1.1e-82 310.5 219 64.4
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 4.0e-82 308.5 212 67.5
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 5.8e-81 304.7 215 65.6
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 1.7e-80 303.1 212 65.6
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.7e-80 303.1 216 63.9
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 2.2e-80 302.8 212 67.0
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 2.9e-80 302.4 216 64.8
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 1.1e-79 300.4 207 66.7
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.2e-79 298.9 224 62.9
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 2.3e-77 292.7 219 62.6
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.6e-75 286.6 205 66.3
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 3.6e-75 285.4 217 62.2
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.4e-74 283.5 191 67.5
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 1.5e-73 280.0 210 59.0
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 5.8e-73 278.1 206 63.1
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 1.1e-71 273.9 206 59.7
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 1.2e-70 270.4 193 65.8
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 1.3e-69 266.9 178 69.1
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 3.9e-69 265.4 198 62.6
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 6.7e-69 264.6 208 55.3
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 5.3e-66 255.0 204 57.8
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 1.3e-64 250.4 205 55.6
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 2.2e-64 249.6 196 61.2
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.8e-64 248.8 166 68.7
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 2.1e-62 243.0 146 74.0
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 4.8e-59 231.9 211 47.4
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 2.4e-58 229.6 209 53.6
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 2.0e-57 226.5 209 51.2
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 5.9e-57 224.9 140 74.3
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 3.8e-56 222.2 144 68.8
FAN02G1482 Fragaria x ananassa HOM05D004605 ORTHO05D005804 5.5e-55 218.4 209 51.7
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 1.6e-54 216.9 144 64.6
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 3.6e-54 215.7 193 51.3
SalBow3G1842 Salvia bowleyana HOM05D004605 ORTHO05D005804 2.5e-52 209.5 199 53.8
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.6e-51 206.8 233 48.1
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 4.8e-51 205.3 171 54.4
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 1.5e-49 200.3 214 45.3
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 4.5e-49 198.7 126 69.0
FAN09G3310 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.8e-43 179.5 163 52.1
Aqoxy3G03713 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.3e-40 170.6 110 71.8
FAN05G1095 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.9e-39 166.8 204 43.1
CDE10G0487 Ceratophyllum demersum HOM05D004605 ORTHO05D005804 4.7e-38 162.2 110 67.3
PSO591G0315 Papaver somniferum HOM05D004605 ORTHO05D005804 4.7e-30 135.6 73 78.1
Cc07_g04480 Coffea canephora HOM05D004605 ORTHO05D005804 7.5e-28 128.3 77 79.2
MCO08G262 Micromonas commoda HOM05D004605 ORTHO05D005804 9.7e-28 127.9 228 36.0
HPP92_012204 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.1e-26 124.4 139 48.9
Cfa025436 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.4e-26 124.0 204 32.8
Nn4g23522 Nelumbo nucifera HOM05D004605 ORTHO05D005804 3.5e-25 119.4 72 76.4
Pp3s30_530 Physcomitrium patens HOM05D004605 ORTHO05D005804 3.5e-25 119.4 212 36.3
BolC3t14639H Brassica oleracea HOM05D004605 ORTHO05D005804 8.8e-21 104.8 68 70.6
Mapoly0107s0018 Marchantia polymorpha HOM05D004605 ORTHO05D005804 5.7e-20 102.1 221 31.2
QL02p036101 Quercus lobata HOM05D004605 ORTHO05D005804 5.4e-18 95.5 116 43.1
QL10p049039 Quercus lobata HOM05D004605 ORTHO05D005804 5.4e-18 95.5 116 43.1
Nn1g08579 Nelumbo nucifera HOM05D004605 ORTHO05D005804 3.5e-17 92.8 84 53.6
QL10p051328 Quercus lobata HOM05D004605 ORTHO05D005804 3.5e-17 92.8 116 41.4
CBR_g36839 Chara braunii HOM05D004605 ORTHO05D005804 6.5e-16 88.6 199 28.1
SMO270G0021 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 2.1e-14 83.6 209 28.7
HPP92_012246 Vanilla planifolia HOM05D004605 ORTHO05D005804 8.0e-14 81.6 108 43.5
Nn1g08577 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.5e-12 77.4 56 60.7
Cre12.g553650 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D143570 4.4e-12 75.9 180 27.8
arahy.Tifrunner.gnm1.ann1.2EY802 Arachis hypogaea HOM05D004605 ORTHO05D005804 9.8e-12 74.7 47 70.2
Nn1g08580 Nelumbo nucifera HOM05D004605 ORTHO05D005804 8.3e-11 71.6 50 64.0
HanXRQChr04g0116811 Helianthus annuus HOM05D004605 ORTHO05D005804 1.1e-10 71.2 40 80.0
PRCOL_00001065 Prasinoderma coloniale HOM05D004605 ORTHO05D005804 1.0e-08 64.7 162 27.8
BcaC01g05772 Brassica carinata HOM05D004605 ORTHO05D032242 6.6e-08 62.0 83 39.8
BolC3t14636H Brassica oleracea HOM05D004605 ORTHO05D032242 1.9e-07 60.5 83 38.6
SGA_v2.0_scaffold226G43143 Striga asiatica HOM05D000344 ORTHO05D000934 3.3e-07 59.7 46 60.9
CAN.G1148.3 Capsicum annuum HOM05D001556 ORTHO05D001505 3.6e-06 56.2 68 48.5


User provided reference genes

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