Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 8.4e-76 287.0 146 100.0
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 7.6e-53 210.7 118 90.7
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 2.2e-52 209.1 124 86.3
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 2.9e-52 208.8 113 93.8
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 2.9e-52 208.8 118 89.0
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 4.9e-52 208.0 118 88.1
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 8.4e-52 207.2 118 88.1
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 8.4e-52 207.2 118 88.1
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 1.1e-51 206.8 118 88.1
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.1e-51 206.8 118 89.0
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 1.4e-51 206.5 118 89.0
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 1.9e-51 206.1 118 89.0
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 3.2e-51 205.3 118 88.1
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 3.2e-51 205.3 113 91.2
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 3.2e-51 205.3 118 89.0
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 5.5e-51 204.5 118 86.4
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 5.5e-51 204.5 118 86.4
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 9.3e-51 203.8 113 90.3
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.6e-50 203.0 119 84.9
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 2.1e-50 202.6 118 87.3
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.1e-50 202.6 118 85.6
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 2.7e-50 202.2 118 84.7
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 2.7e-50 202.2 118 86.4
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.5e-50 201.8 118 86.4
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.5e-50 201.8 118 86.4
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 3.5e-50 201.8 118 86.4
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 3.5e-50 201.8 113 89.4
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 3.5e-50 201.8 113 89.4
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 4.6e-50 201.4 118 85.6
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 7.9e-50 200.7 118 84.7
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.0e-49 200.3 113 88.5
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 1.0e-49 200.3 118 85.6
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 1.0e-49 200.3 112 89.3
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 1.8e-49 199.5 118 83.9
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 1.8e-49 199.5 118 84.7
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 1.8e-49 199.5 113 87.6
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.0e-49 198.7 118 84.7
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 6.7e-49 197.6 118 83.9
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 6.7e-49 197.6 112 90.2
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 8.7e-49 197.2 113 86.7
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 8.7e-49 197.2 118 83.9
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.7e-49 197.2 118 83.9
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.7e-49 197.2 118 83.9
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.7e-49 197.2 118 83.9
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 4.3e-48 194.9 113 85.8
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 4.3e-48 194.9 114 86.0
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 4.3e-48 194.9 118 82.2
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 4.3e-48 194.9 113 85.8
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 4.3e-48 194.9 113 85.8
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 5.6e-48 194.5 113 86.7
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 5.6e-48 194.5 117 82.9
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 7.4e-48 194.1 118 81.4
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 7.4e-48 194.1 118 82.2
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 7.4e-48 194.1 113 85.8
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.3e-47 193.4 117 81.2
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 1.3e-47 193.4 113 85.0
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.3e-47 193.4 118 78.8
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.3e-47 193.4 118 78.8
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 1.6e-47 193.0 114 84.2
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.1e-47 192.6 118 83.1
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 2.1e-47 192.6 113 84.1
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 2.8e-47 192.2 113 85.0
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 3.7e-47 191.8 113 86.7
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 8.2e-47 190.7 113 87.6
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.1e-46 190.3 118 79.7
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 1.4e-46 189.9 113 85.8
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.8e-46 189.5 118 80.5
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 1.8e-46 189.5 112 86.6
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 2.4e-46 189.1 112 88.4
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 3.1e-46 188.7 118 83.1
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.0e-46 188.3 112 85.7
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 9.0e-46 187.2 112 86.6
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.2e-45 186.8 112 84.8
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.0e-45 186.0 154 67.5
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 7.6e-45 184.1 112 83.0
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 1.7e-44 183.0 112 83.9
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 4.9e-44 181.4 113 81.4
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 6.5e-44 181.0 113 81.4
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 1.4e-43 179.9 112 82.1
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.2e-42 176.8 112 78.6
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 6.0e-42 174.5 118 75.4
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 7.9e-42 174.1 118 73.7
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 1.8e-41 172.9 109 82.6
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 2.3e-41 172.6 118 72.0
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 3.0e-41 172.2 112 78.6
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.0e-41 172.2 112 78.6
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 3.0e-41 172.2 118 74.6
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 3.9e-41 171.8 118 74.6
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 3.9e-41 171.8 118 73.7
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 3.9e-41 171.8 112 78.6
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 3.9e-41 171.8 112 78.6
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 7.4e-40 167.5 112 77.7
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.6e-39 166.4 118 72.9
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 4.1e-38 161.8 113 78.8
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.2e-37 160.2 148 62.8
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 3.4e-37 158.7 92 83.7
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.6e-34 149.8 113 65.5
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 7.4e-32 141.0 86 79.1
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 1.4e-30 136.7 96 77.1
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 3.4e-29 132.1 113 58.4
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 3.4e-29 132.1 113 58.4
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 1.3e-28 130.2 73 87.7
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 2.9e-28 129.0 75 84.0
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 2.5e-27 125.9 112 54.5
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.7e-26 122.5 86 68.6
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 3.1e-22 109.0 130 44.6
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.3e-20 103.6 60 85.0
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 9.4e-19 97.4 74 67.6
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 1.8e-14 83.2 109 45.9
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 5.9e-13 78.2 114 43.0
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-12 77.4 114 43.0
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-12 77.4 104 43.3
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.0e-12 77.4 113 45.1
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 1.7e-12 76.6 42 88.1
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 2.9e-12 75.9 111 45.0
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-12 75.5 114 42.1
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 3.8e-12 75.5 111 43.2
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-11 73.9 122 40.2
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 3.2e-11 72.4 115 40.9
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 4.7e-10 68.6 114 41.2
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 4.7e-10 68.6 114 41.2
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 4.7e-10 68.6 105 41.0
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 4.4e-08 62.0 89 41.6
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 1.7e-07 60.1 121 38.8
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 1.7e-07 60.1 121 38.8
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-07 59.7 121 38.0
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 4.1e-06 55.5 91 39.6


User provided reference genes

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