Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 4.7e-285 984.2 629 100.0
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 1.5e-145 520.8 615 62.3
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.3e-136 491.1 613 59.5
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 3.8e-133 479.6 614 61.1
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 6.3e-128 462.2 604 60.3
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 4.1e-127 459.5 608 60.2
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.1e-124 451.4 618 60.8
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 5.5e-124 449.1 630 57.5
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 3.6e-123 446.4 621 54.1
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.3e-122 444.5 617 58.2
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 6.7e-122 442.2 626 53.2
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 4.3e-121 439.5 635 60.2
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.0e-117 428.3 611 57.9
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 1.0e-117 428.3 623 58.6
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 1.6e-115 421.0 606 55.8
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 2.1e-115 420.6 577 57.5
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 3.6e-115 419.9 632 46.0
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.0e-114 418.3 610 53.6
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 3.0e-114 416.8 617 58.7
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 5.7e-113 412.5 613 58.7
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 6.3e-112 409.1 614 59.3
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 3.1e-111 406.8 615 56.4
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.2e-110 404.8 613 55.0
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 1.5e-110 404.4 612 54.6
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.5e-110 404.4 614 59.0
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.0e-110 404.1 627 44.0
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 3.4e-110 403.3 603 59.4
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.9e-109 400.2 609 56.5
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 6.5e-109 399.1 625 55.5
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.4e-108 397.9 632 39.4
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 4.2e-108 396.4 659 51.7
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.2e-108 396.4 642 45.0
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 4.7e-107 392.9 617 55.4
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.8e-106 391.0 611 47.3
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 3.9e-106 389.8 628 43.3
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 5.7e-105 386.0 617 50.6
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 7.4e-105 385.6 616 48.7
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 2.8e-104 383.6 615 52.8
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 6.3e-104 382.5 611 55.8
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 1.2e-102 378.3 632 44.0
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.0e-102 377.5 644 46.6
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 4.5e-102 376.3 617 54.3
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 4.5e-102 376.3 608 43.3
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.0e-101 375.2 617 53.8
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 1.0e-101 375.2 612 54.6
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 1.3e-101 374.8 630 51.0
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 2.9e-101 373.6 635 52.0
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 3.8e-101 373.2 632 54.3
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 6.5e-101 372.5 598 57.5
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 6.1e-99 365.9 551 57.7
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 5.2e-98 362.8 611 45.8
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.7e-96 357.8 614 46.4
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 6.3e-96 355.9 617 48.6
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 1.8e-95 354.4 603 52.2
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 4.1e-95 353.2 482 62.2
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 7.0e-95 352.4 618 49.5
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 7.7e-94 349.0 503 58.3
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 2.2e-93 347.4 611 55.3
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 6.5e-93 345.9 532 54.5
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 1.9e-92 344.4 617 49.8
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 4.2e-92 343.2 626 52.1
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.2e-91 341.7 609 53.9
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 2.7e-91 340.5 520 49.6
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 4.1e-87 326.6 615 51.2
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 5.4e-87 326.2 612 49.0
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 2.0e-86 324.3 504 57.1
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 3.5e-86 323.6 622 50.3
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 5.5e-84 316.2 615 50.6
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 9.5e-84 315.5 547 54.7
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.6e-83 313.5 605 53.4
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.2e-81 308.5 638 45.6
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 3.7e-80 303.5 605 51.4
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 4.9e-80 303.1 611 51.2
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 8.3e-80 302.4 617 51.4
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 2.0e-78 297.7 624 46.6
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 2.0e-78 297.7 624 46.6
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.0e-77 295.4 620 48.1
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.0e-77 295.4 620 48.1
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 1.2e-75 288.5 620 47.7
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 1.2e-75 288.5 388 56.2
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.6e-75 288.1 621 45.2
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 2.8e-75 287.3 563 47.4
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 6.8e-74 282.7 611 47.6
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.8e-66 258.1 616 45.8
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.3e-64 251.9 417 48.9
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.9e-64 250.8 578 51.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 2.9e-64 250.8 470 55.3
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 3.7e-64 250.4 605 41.7
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 3.5e-62 243.8 609 48.3
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 3.5e-62 243.8 497 49.3
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 8.6e-61 239.2 634 43.5
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 4.3e-60 236.9 613 47.8
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 3.4e-57 227.3 553 44.5
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 2.9e-56 224.2 400 57.8
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 3.2e-55 220.7 612 46.4
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.1e-55 220.3 610 32.8
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.1e-55 220.3 610 32.8
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.3e-53 215.3 607 45.6
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.3e-53 215.3 647 27.0
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 3.3e-52 210.7 611 44.0
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 5.6e-52 209.9 527 47.8
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 9.5e-52 209.1 612 44.8
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 1.7e-45 188.3 621 44.6
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 9.9e-41 172.6 314 36.6
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 5.6e-36 156.8 333 53.5
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.7e-32 145.2 160 55.0
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 5.1e-29 133.7 206 46.6
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.6e-22 112.1 152 49.3
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 6.2e-19 100.1 213 47.4
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 3.1e-10 71.2 58 62.1
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 9.0e-10 69.7 58 60.3
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 7.7e-09 66.6 589 34.1
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 2.9e-08 64.7 54 63.0


User provided reference genes

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