Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 1.3e-99 366.3 178 100.0
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 3.9e-59 231.9 155 74.2
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 2.1e-57 226.1 151 73.5
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 4.8e-57 224.9 151 73.5
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 1.4e-56 223.4 152 73.0
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 1.8e-56 223.0 152 69.7
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 5.3e-56 221.5 151 72.8
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 6.9e-56 221.1 151 72.2
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.2e-55 220.3 154 68.8
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 2.0e-55 219.5 151 72.2
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 2.0e-55 219.5 151 72.2
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 3.4e-55 218.8 151 68.2
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 3.4e-55 218.8 154 71.4
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 5.8e-55 218.0 151 71.5
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 9.9e-55 217.2 154 69.5
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 2.2e-54 216.1 155 69.7
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 2.9e-54 215.7 151 70.9
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.1e-53 213.8 151 72.8
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 5.4e-53 211.5 151 68.9
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 9.3e-53 210.7 151 68.9
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.2e-52 210.3 151 70.9
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.0e-51 207.2 151 67.5
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 1.8e-51 206.5 155 65.8
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 2.3e-51 206.1 134 75.4
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 3.0e-51 205.7 155 64.5
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 1.5e-50 203.4 149 67.1
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 4.3e-50 201.8 140 68.6
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 9.6e-50 200.7 151 65.6
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 1.3e-49 200.3 155 64.5
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 1.3e-49 200.3 151 64.9
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 2.1e-49 199.5 151 67.5
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 2.8e-49 199.1 158 64.6
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 3.7e-49 198.7 141 70.2
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 4.8e-49 198.4 151 64.9
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 6.2e-49 198.0 152 64.5
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 1.1e-48 197.2 118 78.0
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.1e-48 197.2 150 64.7
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 1.8e-48 196.4 134 70.1
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 4.0e-48 195.3 112 79.5
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 5.3e-48 194.9 156 62.8
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 6.9e-48 194.5 138 67.4
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 9.0e-48 194.1 156 64.1
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 9.0e-48 194.1 151 62.9
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 1.2e-47 193.7 152 65.8
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 1.5e-47 193.4 149 65.1
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 2.6e-47 192.6 159 61.0
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 4.5e-47 191.8 151 65.6
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 4.5e-47 191.8 139 68.3
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 5.8e-47 191.4 159 60.4
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 1.3e-46 190.3 142 64.1
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 1.3e-46 190.3 151 62.9
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 1.7e-46 189.9 151 63.6
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 2.2e-46 189.5 151 62.3
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 2.2e-46 189.5 154 63.0
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 2.2e-46 189.5 154 63.0
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 2.9e-46 189.1 159 61.0
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 2.9e-46 189.1 146 66.4
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 8.4e-46 187.6 149 61.7
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 1.9e-45 186.4 152 64.5
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 2.4e-45 186.0 152 63.2
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 2.4e-45 186.0 117 71.8
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 3.2e-45 185.7 150 62.0
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 3.2e-45 185.7 118 75.4
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 4.2e-45 185.3 142 64.1
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 7.1e-45 184.5 133 66.2
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 9.3e-45 184.1 159 59.1
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 9.3e-45 184.1 154 61.0
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 1.2e-44 183.7 145 64.1
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 1.2e-44 183.7 145 61.4
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 1.6e-44 183.3 111 73.0
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 2.1e-44 183.0 118 71.2
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 3.5e-44 182.2 151 61.6
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 4.6e-44 181.8 150 60.0
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 4.6e-44 181.8 116 71.6
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 4.6e-44 181.8 143 62.2
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 1.3e-43 180.3 150 58.7
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.8e-43 179.9 151 61.6
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 2.3e-43 179.5 142 62.7
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 2.3e-43 179.5 142 62.7
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 3.0e-43 179.1 125 67.2
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 6.7e-43 177.9 142 62.7
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 6.7e-43 177.9 135 61.5
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 8.7e-43 177.6 153 60.1
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.1e-42 177.2 135 65.9
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 1.5e-42 176.8 112 72.3
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 1.9e-42 176.4 151 60.9
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 1.9e-42 176.4 142 62.0
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 1.9e-42 176.4 103 77.7
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 2.5e-42 176.0 126 66.7
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 3.3e-42 175.6 115 69.6
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 7.4e-42 174.5 151 56.3
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 1.3e-41 173.7 140 61.4
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.3e-41 173.7 111 71.2
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 1.6e-41 173.3 156 57.7
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 4.8e-41 171.8 156 57.1
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.4e-40 170.2 151 58.3
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 1.8e-40 169.9 147 55.8
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 9.0e-40 167.5 130 60.0
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 3.4e-39 165.6 146 56.8
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 3.4e-39 165.6 146 56.8
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 3.4e-39 165.6 151 57.6
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 4.5e-39 165.2 103 71.8
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 4.5e-39 165.2 103 71.8
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 4.5e-39 165.2 125 63.2
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 5.8e-39 164.9 103 71.8
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 7.6e-39 164.5 110 69.1
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 1.0e-38 164.1 103 70.9
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 1.0e-38 164.1 103 70.9
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 1.3e-38 163.7 102 71.6
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 1.3e-38 163.7 102 71.6
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 1.3e-38 163.7 103 70.9
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 1.7e-38 163.3 103 70.9
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 1.7e-38 163.3 103 70.9
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 1.7e-38 163.3 110 68.2
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 2.2e-38 162.9 108 68.5
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 2.2e-38 162.9 103 70.9
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 1.9e-37 159.8 103 69.9
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 1.9e-37 159.8 103 69.9
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 1.9e-37 159.8 103 69.9
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 3.2e-37 159.1 111 64.9
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 4.2e-37 158.7 107 69.2
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.2e-36 157.1 110 66.4
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 6.0e-36 154.8 110 64.5
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 1.3e-35 153.7 104 67.3
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 1.8e-35 153.3 99 78.8
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 1.6e-33 146.7 148 52.7
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 1.6e-33 146.7 150 53.3
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 3.7e-33 145.6 148 52.7
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 1.1e-29 134.0 72 79.2
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 1.1e-29 134.0 103 60.2
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 6.7e-27 124.8 151 48.3
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 6.9e-24 114.8 132 47.7
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 1.2e-23 114.0 132 48.5
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.2e-23 114.0 120 53.3
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.6e-23 112.8 89 62.9
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 9.4e-21 104.4 86 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 4.7e-20 102.1 100 48.0
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 1.8e-19 100.1 94 52.1
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 3.0e-19 99.4 95 48.4
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 5.1e-19 98.6 83 54.2
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 3.5e-07 59.3 33 78.8
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 4.5e-07 58.9 31 80.6
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.3e-06 57.4 48 52.1
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 2.9e-06 56.2 48 52.1


User provided reference genes

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