Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.9e-96 355.9 187 100.0
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.4e-46 190.3 181 58.6
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 7.5e-45 184.5 185 58.4
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 7.0e-43 177.9 185 55.7
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.2e-42 177.2 183 52.5
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 4.3e-40 168.7 180 56.1
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 9.5e-40 167.5 182 56.6
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 8.0e-39 164.5 182 54.4
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.4e-38 163.7 180 55.6
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 3.0e-38 162.5 179 50.3
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.2e-37 160.6 181 50.8
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.0e-37 159.8 181 52.5
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 3.4e-37 159.1 184 49.5
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 4.4e-37 158.7 181 54.7
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 5.7e-37 158.3 182 53.3
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 7.5e-37 157.9 171 52.0
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 9.8e-37 157.5 183 54.1
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.3e-36 157.1 161 55.3
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.3e-36 157.1 154 53.9
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.3e-36 157.1 161 56.5
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.3e-36 157.1 181 53.0
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.2e-36 156.4 184 53.8
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 2.2e-36 156.4 171 53.2
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 2.9e-36 156.0 184 53.3
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 2.9e-36 156.0 179 51.4
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.9e-36 155.2 182 49.5
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 8.3e-36 154.5 186 52.2
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.1e-35 154.1 179 53.1
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.1e-35 154.1 174 52.3
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 2.4e-35 152.9 183 54.1
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 4.1e-35 152.1 182 47.8
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 5.4e-35 151.8 183 50.8
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 9.2e-35 151.0 172 51.2
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 9.2e-35 151.0 172 51.2
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.2e-34 150.6 165 50.3
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.2e-34 150.6 155 51.6
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.2e-34 150.6 167 55.7
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.6e-34 150.2 162 53.7
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 2.0e-34 149.8 183 50.3
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 2.0e-34 149.8 182 48.9
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.0e-34 149.8 183 51.9
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 2.7e-34 149.4 183 47.5
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 4.6e-34 148.7 172 52.3
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 4.6e-34 148.7 155 56.8
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 4.6e-34 148.7 154 55.8
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 5.9e-34 148.3 165 51.5
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.9e-34 148.3 162 52.5
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 5.9e-34 148.3 172 50.6
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 7.8e-34 147.9 170 50.6
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.3e-33 146.4 157 52.2
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.3e-33 146.4 156 55.8
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 3.0e-33 146.0 165 48.5
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 3.9e-33 145.6 186 47.3
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 5.0e-33 145.2 165 51.5
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 5.0e-33 145.2 183 50.3
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 6.6e-33 144.8 159 54.1
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 6.6e-33 144.8 158 50.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 8.6e-33 144.4 159 49.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 8.6e-33 144.4 162 51.9
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 8.6e-33 144.4 184 47.3
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 1.5e-32 143.7 178 48.9
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.9e-32 143.3 180 43.9
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.5e-32 142.9 165 50.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.5e-32 142.9 165 50.3
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.5e-32 142.9 182 50.0
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 3.3e-32 142.5 156 51.3
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 4.3e-32 142.1 157 54.8
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 4.3e-32 142.1 168 53.6
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 5.6e-32 141.7 172 50.6
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 7.3e-32 141.4 156 50.6
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 9.5e-32 141.0 154 55.2
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.2e-31 140.6 165 49.7
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.6e-31 140.2 185 43.8
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 2.8e-31 139.4 155 54.8
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 3.6e-31 139.0 181 46.4
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.6e-31 139.0 165 48.5
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.6e-31 139.0 165 48.5
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 3.6e-31 139.0 157 52.2
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 3.6e-31 139.0 165 49.1
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.2e-31 138.3 161 46.0
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 6.2e-31 138.3 156 50.6
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 8.0e-31 137.9 155 49.0
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 8.0e-31 137.9 150 52.0
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 2.3e-30 136.3 165 48.5
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 2.3e-30 136.3 165 48.5
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 3.1e-30 136.0 155 53.5
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 6.8e-30 134.8 153 47.1
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.2e-29 134.0 156 49.4
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 3.4e-29 132.5 129 58.1
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 4.4e-29 132.1 137 53.3
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 5.8e-29 131.7 156 48.7
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 9.8e-29 131.0 138 52.9
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.7e-28 129.0 142 51.4
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.1e-27 127.5 180 40.6
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.4e-27 126.3 151 43.7
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 2.0e-26 123.2 122 59.8
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.7e-26 122.9 130 53.1
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 6.0e-26 121.7 150 48.7
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.0e-25 120.9 137 53.3
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.3e-25 120.6 138 52.9
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 3.3e-24 115.9 123 52.8
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 7.3e-24 114.8 123 55.3
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.7e-23 112.1 123 51.2
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.0e-22 109.0 183 45.4
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 5.2e-22 108.6 118 54.2
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 7.8e-18 94.7 114 50.9
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.4e-14 84.0 76 57.9
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.3e-14 83.2 93 51.6
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.7e-10 69.7 130 33.8
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.6e-10 68.9 82 43.9
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 6.6e-09 65.1 159 32.1
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 5.6e-08 62.0 71 49.3


User provided reference genes

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