Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 0.0e+00 1104.0 621 100.0
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.9e-209 733.0 499 84.8
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 8.5e-194 681.0 503 76.7
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 1.1e-193 680.6 485 82.5
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 7.9e-192 674.5 536 74.4
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.7e-186 656.8 573 68.9
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 6.5e-186 654.8 488 79.3
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.9e-185 653.3 493 80.9
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 3.6e-184 649.0 510 72.4
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 1.4e-183 647.1 486 78.6
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.0e-182 643.3 500 75.6
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 2.8e-181 639.4 499 75.4
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 4.8e-181 638.6 501 76.2
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 6.3e-181 638.3 489 74.0
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 8.2e-181 637.9 491 75.2
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 2.0e-179 633.3 519 72.1
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 3.8e-178 629.0 501 74.5
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 5.0e-178 628.6 487 76.0
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 6.7e-175 618.2 488 75.4
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 5.7e-174 615.1 486 76.3
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 7.4e-174 614.8 509 71.7
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 2.2e-173 613.2 450 74.9
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 3.7e-173 612.5 452 75.9
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 3.7e-173 612.5 513 71.9
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 3.7e-173 612.5 450 74.9
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 7.0e-172 608.2 486 73.0
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.6e-171 606.3 485 74.8
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.8e-170 602.4 500 71.8
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 6.5e-170 601.7 501 71.7
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 8.5e-170 601.3 501 73.7
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 1.6e-168 597.0 486 73.3
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 2.1e-168 596.7 501 71.7
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 6.1e-168 595.1 515 71.5
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 8.0e-168 594.7 489 74.6
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 1.4e-167 594.0 487 71.0
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 3.0e-167 592.8 489 71.6
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 8.8e-167 591.3 494 72.3
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 1.2e-166 590.9 502 70.1
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 1.5e-166 590.5 491 73.7
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 7.5e-166 588.2 499 71.1
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 7.5e-166 588.2 501 72.3
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 9.7e-166 587.8 489 74.6
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 6.3e-165 585.1 486 73.0
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 1.1e-164 584.3 505 70.7
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.4e-164 583.2 520 68.7
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 3.1e-164 582.8 501 72.1
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 2.7e-163 579.7 499 71.7
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 4.5e-163 578.9 485 72.6
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 5.9e-163 578.6 452 72.3
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 2.2e-162 576.6 485 69.1
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.1e-161 574.3 500 69.2
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 1.5e-161 573.9 486 70.8
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 1.5e-161 573.9 486 70.8
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 4.2e-161 572.4 479 73.1
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 5.5e-161 572.0 516 67.2
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 9.4e-161 571.2 484 69.6
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 8.0e-160 568.2 453 74.4
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 4.0e-159 565.8 582 63.6
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 4.0e-159 565.8 502 67.1
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 8.8e-159 564.7 450 74.9
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 1.5e-158 563.9 500 69.8
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 3.4e-158 562.8 486 68.9
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 5.7e-158 562.0 504 69.6
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 2.8e-157 559.7 502 68.7
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 6.3e-157 558.5 508 65.6
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.1e-156 557.8 521 67.6
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 1.4e-156 557.4 485 70.7
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.1e-156 555.8 490 70.4
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 5.4e-156 555.4 447 73.4
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 7.0e-156 555.1 451 72.9
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.6e-155 553.9 451 72.9
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 5.9e-155 552.0 497 67.2
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 2.3e-154 550.1 497 63.4
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 2.0e-150 537.0 500 68.2
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.2e-149 533.5 546 61.9
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.2e-149 533.5 484 70.5
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 1.8e-148 530.4 460 68.9
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.6e-144 517.3 450 72.7
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.3e-143 513.5 467 65.1
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 4.0e-143 512.7 450 68.9
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 1.2e-139 501.1 502 63.9
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 6.6e-138 495.4 375 72.8
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 3.3e-137 493.0 488 61.5
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 5.6e-137 492.3 375 76.5
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 1.6e-136 490.7 375 73.9
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.3e-130 471.1 502 56.6
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 6.6e-130 468.8 376 70.5
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 9.2e-124 448.4 390 68.5
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 1.1e-121 441.4 576 51.6
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 7.6e-118 428.7 478 57.7
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.7e-114 417.5 393 65.6
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 2.3e-114 417.2 452 62.6
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 3.9e-114 416.4 385 71.2
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.9e-113 414.1 366 75.1
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 1.8e-111 407.5 377 70.8
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 2.0e-110 404.1 287 79.4
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 5.1e-106 389.4 391 68.8
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.4e-103 381.3 468 53.6
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 4.5e-102 376.3 361 67.6
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 1.6e-99 367.9 344 68.3
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 3.0e-90 337.0 337 63.2
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 1.5e-89 334.7 312 71.5
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 1.9e-89 334.3 309 67.6
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.3e-89 333.2 527 47.2
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 6.5e-85 319.3 315 67.0
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 6.5e-85 319.3 315 67.6
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 4.1e-79 300.1 526 43.9
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 3.4e-78 297.0 342 59.1
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 3.9e-74 283.5 242 68.2
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 5.1e-74 283.1 286 64.7
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.5e-70 270.0 317 60.6
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 3.7e-64 250.4 339 54.3
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 1.4e-58 231.9 251 55.8
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.8e-56 223.4 352 51.7
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 4.8e-56 223.4 148 73.6
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 5.9e-54 216.5 128 82.8
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 6.5e-53 213.0 468 43.6
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 7.2e-52 209.5 128 79.7
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 9.8e-49 199.1 128 79.7
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 1.7e-40 171.8 471 35.9
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 5.4e-39 166.8 198 60.6
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.6e-35 154.1 84 85.7
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 2.2e-32 144.8 120 73.3
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 2.4e-31 141.4 126 72.2
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 1.9e-28 131.7 162 51.9
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 2.3e-21 108.2 283 32.9
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.9e-21 107.5 78 80.8
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 5.0e-21 107.1 92 77.2
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 6.6e-21 106.7 145 50.3
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.2e-19 102.4 72 69.4
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.1e-18 97.8 66 72.7
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 4.9e-16 90.5 379 29.0
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.4e-15 89.0 64 71.9
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 2.7e-14 84.7 91 53.8
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 8.6e-13 79.7 87 55.2
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 2.0e-09 68.6 50 64.0
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 5.4e-07 60.5 326 26.4
unitig_899.g14663 Utricularia gibba HOM05D005490 ORTHO05D006606 2.1e-06 58.5 91 48.4


User provided reference genes

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