Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031510.1 Olea europaea HOM05D000681 ORTHO05D019444 5.2e-99 364.4 184 100.0
Cfa000465 Carpinus fangiana HOM05D000681 ORTHO05D003965 9.1e-11 71.2 67 65.7
PGR004G2448 Punica granatum HOM05D000681 ORTHO05D003965 1.6e-10 70.5 68 61.8
Haze_06454 Corylus avellana HOM05D000681 ORTHO05D003965 2.6e-10 69.7 67 65.7
Dinv12811 Davidia involucrata HOM05D000681 ORTHO05D019444 4.5e-10 68.9 70 64.3
Atru.chr1.3219 Acer truncatum HOM05D000681 ORTHO05D003965 7.7e-10 68.2 62 71.0
Aqoxy1G03333 Aquilegia oxysepala HOM05D000681 ORTHO05D003965 2.9e-09 66.2 67 61.2
Haze_06455 Corylus avellana HOM05D000681 ORTHO05D003965 5.0e-09 65.5 70 60.0
Cfa000462 Carpinus fangiana HOM05D000681 ORTHO05D003965 8.5e-09 64.7 70 60.0
Dinv25483 Davidia involucrata HOM05D000681 ORTHO05D003965 1.1e-08 64.3 60 65.0
CiPaw.11G000800 Carya illinoinensis HOM05D000681 ORTHO05D003965 1.5e-08 63.9 63 68.3
THA.LOC104799268 Tarenaya hassleriana HOM05D000681 ORTHO05D003965 2.5e-08 63.2 62 64.5
Thecc.09G247600 Theobroma cacao HOM05D000681 ORTHO05D003965 2.5e-08 63.2 69 60.9
TPR.G4545 Trifolium pratense HOM05D000681 ORTHO05D003965 2.5e-08 63.2 60 63.3
Prupe.1G200300 Prunus persica HOM05D000681 ORTHO05D003965 3.2e-08 62.8 71 57.7
Cpa.g.sc103.76 Carica papaya HOM05D000681 ORTHO05D003965 4.2e-08 62.4 60 65.0
COL.COLO4_10268 Corchorus olitorius HOM05D000681 ORTHO05D003965 4.2e-08 62.4 70 61.4
Psat3g190440 Pisum sativum HOM05D000681 ORTHO05D003965 5.5e-08 62.0 72 56.9
SGA_v2.0_scaffold144G35994 Striga asiatica HOM05D005270 ORTHO05D003965 5.5e-08 62.0 63 65.1
ECA233G4280 Erigeron canadensis HOM05D000681 ORTHO05D003965 9.4e-08 61.2 61 65.6
AUR62005971 Chenopodium quinoa HOM05D000681 ORTHO05D003965 1.6e-07 60.5 59 62.7
Eucgr.J00857 Eucalyptus grandis HOM05D000681 ORTHO05D003965 1.6e-07 60.5 63 61.9
MSTRG.3455 Avicennia marina HOM05D000681 ORTHO05D003965 2.1e-07 60.1 63 63.5
Duzib168G2011 Durio zibethinus HOM05D000681 ORTHO05D003965 2.1e-07 60.1 69 58.0
AT3G54540 Arabidopsis thaliana HOM05D000681 ORTHO05D003965 2.7e-07 59.7 62 61.3
Lsat_1_v5_gn_3_33421 Lactuca sativa HOM05D000681 ORTHO05D003965 2.7e-07 59.7 73 57.5
Sc03g0003470 Simmondsia chinensis HOM05D000681 ORTHO05D019444 2.7e-07 59.7 69 56.5
AL5G35620 Arabidopsis lyrata HOM05D000681 ORTHO05D003965 3.6e-07 59.3 62 61.3
AUR62028099 Chenopodium quinoa HOM05D000681 ORTHO05D003965 3.6e-07 59.3 59 61.0
PSO170G5940 Papaver somniferum HOM05D000681 ORTHO05D003965 3.6e-07 59.3 64 59.4
PSO782G5048 Papaver somniferum HOM05D000681 ORTHO05D003965 3.6e-07 59.3 64 59.4
Cc07_g06650 Coffea canephora HOM05D000681 ORTHO05D003965 6.1e-07 58.5 66 57.6
Nitab4.5_0000164g0210 Nicotiana tabacum HOM05D000681 ORTHO05D003965 6.1e-07 58.5 55 63.6
Atru.chr11.46 Acer truncatum HOM05D000681 ORTHO05D003965 8.0e-07 58.2 60 63.3
arahy.Tifrunner.gnm1.ann1.5EKU9C Arachis hypogaea HOM05D000681 ORTHO05D003965 8.0e-07 58.2 59 61.0
TAR628G1397 Trochodendron aralioides HOM05D000681 ORTHO05D003965 8.0e-07 58.2 54 66.7
arahy.Tifrunner.gnm1.ann1.00G2U6 Arachis hypogaea HOM05D000681 ORTHO05D003965 1.0e-06 57.8 56 62.5
arahy.Tifrunner.gnm1.ann1.TJ4XJK Arachis hypogaea HOM05D000681 ORTHO05D003965 1.0e-06 57.8 56 62.5
GSVIVG01034906001 Vitis vinifera HOM05D000681 ORTHO05D003965 1.4e-06 57.4 62 58.1
Actinidia11737 Actinidia chinensis HOM05D000681 ORTHO05D019444 1.8e-06 57.0 62 59.7
ClCG06G001150 Citrullus lanatus HOM05D000681 ORTHO05D003965 1.8e-06 57.0 61 63.9
Ciclev10025010m.g Citrus clementina HOM05D000681 ORTHO05D003965 1.8e-06 57.0 66 65.2
TAR626G1049 Trochodendron aralioides HOM05D000681 ORTHO05D003965 1.8e-06 57.0 62 61.3
vmacro08459 Vaccinium macrocarpon HOM05D000681 ORTHO05D003965 1.8e-06 57.0 55 67.3
Aa31sc64G30 Aethionema arabicum HOM05D000681 ORTHO05D003965 2.3e-06 56.6 62 56.5
Phvul.006G220700 Phaseolus vulgaris HOM05D000681 ORTHO05D003965 2.3e-06 56.6 54 64.8
arahy.Tifrunner.gnm1.ann1.3GP07U Arachis hypogaea HOM05D000681 ORTHO05D003965 3.0e-06 56.2 55 61.8
CAN.G541.40 Capsicum annuum HOM05D000681 ORTHO05D003965 3.0e-06 56.2 51 68.6
CARHR164450 Cardamine hirsuta HOM05D000681 ORTHO05D003965 3.0e-06 56.2 62 58.1
Potri.008G003300 Populus trichocarpa HOM05D000681 ORTHO05D003965 3.0e-06 56.2 68 57.4
Nitab4.5_0000617g0230 Nicotiana tabacum HOM05D000681 ORTHO05D003965 4.0e-06 55.8 54 64.8
arahy.Tifrunner.gnm1.ann1.H8I0GA Arachis hypogaea HOM05D000681 ORTHO05D003965 5.2e-06 55.5 55 61.8
vmacro01678 Vaccinium macrocarpon HOM05D000681 ORTHO05D003965 5.2e-06 55.5 61 62.3
arahy.Tifrunner.gnm1.ann1.J4K9CJ Arachis hypogaea HOM05D000681 ORTHO05D003965 6.7e-06 55.1 65 56.9
Glyma.13G158600 Glycine max HOM05D000681 ORTHO05D003965 6.7e-06 55.1 54 64.8
Nn4g26615 Nelumbo nucifera HOM05D000681 ORTHO05D003965 6.7e-06 55.1 61 62.3
Carub.0005s2116 Capsella rubella HOM05D000681 ORTHO05D003965 8.8e-06 54.7 68 52.9
Peaxi162Scf01038g00013 Petunia axillaris HOM05D000681 ORTHO05D003965 8.8e-06 54.7 68 57.4
Sc12g0009030 Simmondsia chinensis HOM05D000681 ORTHO05D003965 8.8e-06 54.7 59 61.0
Sc12g0009140 Simmondsia chinensis HOM05D000681 ORTHO05D003965 8.8e-06 54.7 59 61.0


User provided reference genes

Program Settings