Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.3e-140 503.1 249 100.0
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 2.5e-48 196.4 385 38.4
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.3e-47 194.1 393 36.9
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 8.2e-47 191.4 384 38.0
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 3.1e-46 189.5 400 36.0
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 3.1e-46 189.5 404 36.4
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.0e-46 189.1 404 36.6
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 4.5e-45 185.7 382 38.0
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 1.0e-44 184.5 379 36.7
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.1e-41 172.2 399 35.1
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.1e-40 171.0 387 35.1
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 1.5e-40 170.6 382 35.9
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 4.3e-40 169.1 392 33.2
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.7e-40 168.7 393 35.4
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 7.4e-40 168.3 382 35.3
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 9.7e-40 167.9 386 35.5
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.3e-39 167.5 329 37.1
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.3e-39 167.5 323 38.4
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 2.8e-39 166.4 383 35.2
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 2.8e-39 166.4 325 37.8
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 1.4e-38 164.1 339 36.0
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.8e-38 163.7 337 35.9
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 2.4e-38 163.3 398 32.7
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 6.9e-38 161.8 333 35.7
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 6.9e-38 161.8 333 35.7
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 6.9e-38 161.8 401 32.9
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 9.0e-38 161.4 399 34.8
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.2e-37 161.0 397 33.8
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.5e-37 159.1 382 34.6
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.3e-36 157.5 399 33.6
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.7e-36 157.1 371 33.7
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.9e-36 156.4 324 35.5
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 5.0e-36 155.6 398 33.4
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 8.5e-36 154.8 395 34.7
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.1e-35 154.5 327 35.5
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 1.4e-35 154.1 398 32.9
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 1.4e-35 154.1 397 31.0
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.4e-35 154.1 401 31.7
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 1.4e-35 154.1 398 32.2
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.9e-35 153.7 382 33.0
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.9e-35 153.7 309 35.6
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.9e-35 153.7 402 31.3
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 3.2e-35 152.9 382 33.0
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 3.2e-35 152.9 382 33.0
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 5.5e-35 152.1 326 34.4
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 7.2e-35 151.8 309 35.3
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 7.2e-35 151.8 399 32.6
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 9.4e-35 151.4 162 48.8
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.2e-34 151.0 407 32.9
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.2e-34 151.0 352 33.8
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 1.2e-34 151.0 332 34.0
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.6e-34 150.6 399 33.1
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.6e-34 150.6 332 34.3
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.6e-34 150.6 399 32.6
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 2.7e-34 149.8 396 33.8
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 3.6e-34 149.4 345 33.9
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 3.6e-34 149.4 327 33.3
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 4.6e-34 149.1 330 33.6
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 6.1e-34 148.7 389 32.1
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 6.1e-34 148.7 398 32.2
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 7.9e-34 148.3 403 31.8
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 1.0e-33 147.9 405 31.9
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 1.0e-33 147.9 315 34.6
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.4e-33 147.5 326 34.4
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.4e-33 147.5 327 33.9
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 1.4e-33 147.5 398 32.4
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 1.8e-33 147.1 399 32.3
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 2.3e-33 146.7 397 31.7
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 2.3e-33 146.7 397 31.5
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 3.0e-33 146.4 318 34.9
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 3.9e-33 146.0 325 32.3
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 3.9e-33 146.0 324 34.3
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 3.9e-33 146.0 326 34.0
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 5.1e-33 145.6 378 32.5
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 5.1e-33 145.6 328 33.2
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.5e-32 144.1 326 33.4
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.9e-32 143.7 333 33.3
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 2.5e-32 143.3 401 30.4
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 4.3e-32 142.5 397 31.2
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 5.7e-32 142.1 402 32.1
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.7e-31 140.6 386 32.4
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 1.7e-31 140.6 397 30.7
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.1e-30 137.9 395 30.9
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.4e-30 137.5 384 31.2
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 1.4e-30 137.5 387 31.0
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 2.4e-30 136.7 400 30.8
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 9.1e-30 134.8 389 31.1
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 1.5e-29 134.0 318 35.2
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 2.0e-29 133.7 390 29.2
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 8.5e-28 128.3 311 31.2
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 8.5e-28 128.3 399 30.3
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.9e-27 127.1 304 34.2
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 4.2e-27 125.9 378 31.0
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 7.2e-27 125.2 320 29.7
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.6e-26 124.0 338 29.3
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 6.1e-26 122.1 66 81.8
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.3e-25 120.2 404 29.5
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 1.1e-24 117.9 66 78.8
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 4.4e-24 115.9 401 28.7
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 3.7e-23 112.8 66 74.2
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 4.1e-22 109.4 123 59.3
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.3e-22 109.0 66 69.7
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 7.7e-21 105.1 66 68.2
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 2.9e-20 103.2 297 29.0
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 3.8e-20 102.8 65 67.7
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.9e-19 100.5 50 92.0
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.5e-19 100.1 48 95.8
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.6e-18 97.4 123 52.0
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.6e-18 97.4 242 31.8
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 1.0e-17 94.7 361 28.5
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.8e-17 94.0 107 45.8
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 5.9e-13 79.0 295 24.7
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.7e-12 77.4 295 24.7
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 2.1e-10 70.5 123 42.3
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.5e-08 64.3 131 35.1
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 2.6e-08 63.5 34 88.2
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 8.2e-07 58.5 41 65.9


User provided reference genes

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