Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031422.1 Olea europaea HOM05D003751 ORTHO05D004765 2.3e-63 245.4 120 100.0
SGA_v2.0_scaffold36G14436 Striga asiatica HOM05D003751 ORTHO05D004765 5.0e-34 147.9 86 82.6
MSTRG.738 Avicennia marina HOM05D003751 ORTHO05D004765 6.5e-34 147.5 86 80.2
Migut.L01211 Erythranthe guttata HOM05D003751 ORTHO05D004765 1.9e-33 146.0 86 80.2
SGA_v2.0_scaffold16G07765 Striga asiatica HOM05D003751 ORTHO05D004765 9.4e-33 143.7 86 80.2
MSTRG.7761 Avicennia marina HOM05D003751 ORTHO05D004765 1.2e-32 143.3 86 79.1
Migut.E00057 Erythranthe guttata HOM05D003751 ORTHO05D004765 3.9e-31 138.3 86 76.7
Lj6A782T110 Lonicera japonica HOM05D003751 ORTHO05D004765 2.6e-30 135.6 78 85.9
Nitab4.5_0000720g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.8e-29 132.1 83 77.1
Lsat_1_v5_gn_8_48161 Lactuca sativa HOM05D003751 ORTHO05D004765 4.8e-29 131.3 79 79.7
CSS0038990 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 6.3e-29 131.0 82 78.0
HanXRQChr08g0211521 Helianthus annuus HOM05D003751 ORTHO05D004765 1.1e-28 130.2 83 80.7
Nitab4.5_0002832g0050 Nicotiana tabacum HOM05D003751 ORTHO05D004765 1.1e-28 130.2 83 75.9
Actinidia12325 Actinidia chinensis HOM05D003751 ORTHO05D004765 1.4e-28 129.8 81 79.0
Cc11_g12270 Coffea canephora HOM05D003751 ORTHO05D004765 1.8e-28 129.4 81 80.2
Rhsim12G0134600 Rhododendron simsii HOM05D003751 ORTHO05D004765 7.0e-28 127.5 79 78.5
ATR0064G031 Amborella trichopoda HOM05D003751 ORTHO05D004765 1.6e-27 126.3 78 78.2
HanXRQChr12g0379561 Helianthus annuus HOM05D003751 ORTHO05D004765 1.6e-27 126.3 73 84.9
FAN07G2601 Fragaria x ananassa HOM05D003751 ORTHO05D004765 2.0e-27 125.9 86 75.6
MELO3C012139.2 Cucumis melo HOM05D003751 ORTHO05D004765 2.6e-27 125.6 76 80.3
FvH4_4g30420 Fragaria vesca HOM05D003751 ORTHO05D004765 2.6e-27 125.6 86 74.4
Phvul.002G081300 Phaseolus vulgaris HOM05D003751 ORTHO05D004765 2.6e-27 125.6 78 78.2
Psat2g128600 Pisum sativum HOM05D003751 ORTHO05D004765 2.6e-27 125.6 83 73.5
Lalb_Chr17g0341071 Lupinus albus HOM05D003751 ORTHO05D004765 3.5e-27 125.2 78 80.8
Lsat_1_v5_gn_4_12041 Lactuca sativa HOM05D003751 ORTHO05D004765 4.5e-27 124.8 79 77.2
PGSC0003DMG400004190 Solanum tuberosum HOM05D003751 ORTHO05D004765 4.5e-27 124.8 80 75.0
TPR.G24438 Trifolium pratense HOM05D003751 ORTHO05D004765 4.5e-27 124.8 78 76.9
Actinidia33247 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.9e-27 124.4 96 67.7
Ca_04940_v3 Cicer arietinum L. HOM05D003751 ORTHO05D004765 5.9e-27 124.4 62 90.3
SalBow2G2522 Salvia bowleyana HOM05D003751 ORTHO05D004765 5.9e-27 124.4 104 63.5
SalBow2G2568 Salvia bowleyana HOM05D003751 ORTHO05D004765 5.9e-27 124.4 104 63.5
VMungo1215G2610 Vigna mungo HOM05D003751 ORTHO05D004765 5.9e-27 124.4 60 93.3
Glyma.02G114800 Glycine max HOM05D003751 ORTHO05D004765 7.7e-27 124.0 77 75.3
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 7.7e-27 124.0 86 72.1
Solyc01g011040.3 Solanum lycopersicum HOM05D003751 ORTHO05D004765 7.7e-27 124.0 80 76.2
Sopen01g034040 Solanum pennellii HOM05D003751 ORTHO05D004765 7.7e-27 124.0 80 76.2
vmacro01326 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 7.7e-27 124.0 82 73.2
TAR622G0005 Trochodendron aralioides HOM05D003751 ORTHO05D004765 1.0e-26 123.6 78 79.5
Lj2g0008638 Lotus japonicus HOM05D003751 ORTHO05D004765 1.3e-26 123.2 73 79.5
vmacro16373 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 1.3e-26 123.2 86 70.9
vmacro23251 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 1.3e-26 123.2 86 70.9
ClCG05G023830 Citrullus lanatus HOM05D003751 ORTHO05D004765 1.7e-26 122.9 86 75.6
Nn4g23361 Nelumbo nucifera HOM05D003751 ORTHO05D004765 1.7e-26 122.9 77 76.6
Prupe.1G283000 Prunus persica HOM05D003751 ORTHO05D004765 1.7e-26 122.9 82 76.8
SEGI_02286 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 1.7e-26 122.9 74 77.0
CAN.G541.15 Capsicum annuum HOM05D003751 ORTHO05D004765 2.9e-26 122.1 82 73.2
RcHm_v2.0_Chr4g0438711 Rosa chinensis HOM05D003751 ORTHO05D004765 2.9e-26 122.1 82 76.8
Hund05853 Selenicereus undatus HOM05D003751 ORTHO05D004765 2.9e-26 122.1 86 73.3
Aqoxy3G03571 Aquilegia oxysepala HOM05D003751 ORTHO05D004765 3.8e-26 121.7 78 76.9
CsaV3_5G033180 Cucumis sativus L. HOM05D003751 ORTHO05D004765 5.0e-26 121.3 76 78.9
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 5.0e-26 121.3 66 84.8
GSVIVG01012205001 Vitis vinifera HOM05D003751 ORTHO05D004765 5.0e-26 121.3 81 75.3
AUR62003123 Chenopodium quinoa HOM05D003751 ORTHO05D004765 6.5e-26 120.9 76 77.6
AUR62007943 Chenopodium quinoa HOM05D003751 ORTHO05D004765 6.5e-26 120.9 76 77.6
FAN17G0137 Fragaria x ananassa HOM05D003751 ORTHO05D004765 6.5e-26 120.9 86 75.6
FAN22G1318 Fragaria x ananassa HOM05D003751 ORTHO05D004765 6.5e-26 120.9 86 75.6
Peaxi162Scf00097g00610 Petunia axillaris HOM05D003751 ORTHO05D004765 6.5e-26 120.9 73 78.1
Glyma.01G056300 Glycine max HOM05D003751 ORTHO05D004765 8.5e-26 120.6 73 80.8
DCAR_005254 Daucus carota HOM05D003751 ORTHO05D004765 1.1e-25 120.2 79 75.9
DCAR_016919 Daucus carota HOM05D003751 ORTHO05D004765 1.1e-25 120.2 79 75.9
Nn3g17386 Nelumbo nucifera HOM05D003751 ORTHO05D004765 1.1e-25 120.2 77 76.6
HPP92_007743 Vanilla planifolia HOM05D003751 ORTHO05D004765 1.1e-25 120.2 66 84.8
AT5G61240 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 1.5e-25 119.8 73 78.1
Dinv38780 Davidia involucrata HOM05D003751 ORTHO05D004765 1.5e-25 119.8 76 76.3
Thhalv10004587m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 1.5e-25 119.8 74 81.1
FAN12G0947 Fragaria x ananassa HOM05D003751 ORTHO05D004765 1.5e-25 119.8 86 74.4
MD13G1065200 Malus domestica HOM05D003751 ORTHO05D004765 1.5e-25 119.8 89 71.9
Medtr5g043800 Medicago truncatula HOM05D003751 ORTHO05D004765 1.5e-25 119.8 83 72.3
QL03p070738 Quercus lobata HOM05D003751 ORTHO05D004765 1.5e-25 119.8 76 77.6
QL03p071051 Quercus lobata HOM05D003751 ORTHO05D004765 1.5e-25 119.8 76 77.6
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea HOM05D003751 ORTHO05D004765 1.9e-25 119.4 82 73.2
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea HOM05D003751 ORTHO05D004765 1.9e-25 119.4 82 73.2
A03p46870 Brassica napus HOM05D003751 ORTHO05D004765 1.9e-25 119.4 74 81.1
Cfa008900 Carpinus fangiana HOM05D003751 ORTHO05D004765 1.9e-25 119.4 81 75.3
ECA233G2546 Erigeron canadensis HOM05D003751 ORTHO05D004765 1.9e-25 119.4 61 88.5
Actinidia19010 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.5e-25 119.0 65 80.0
Aa31LG11G2120 Aethionema arabicum HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 78.1
BcaC06g33219 Brassica carinata HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 76.7
C07p44920 Brassica napus HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 76.7
BolC7t45015H Brassica oleracea HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 76.7
Cpa.g.sc1.101 Carica papaya HOM05D003751 ORTHO05D004765 2.5e-25 119.0 74 77.0
Gohir.A12G180500 Gossypium hirsutum HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 75.3
Gohir.D12G183125 Gossypium hirsutum HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 75.3
Gohir.D12G183200 Gossypium hirsutum HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 75.3
Gorai.008G196500 Gossypium raimondii HOM05D003751 ORTHO05D004765 2.5e-25 119.0 73 75.3
Manes.05G108200 Manihot esculenta HOM05D003751 ORTHO05D004765 2.5e-25 119.0 77 75.3
CANSAT80G0608 Cannabis sativa HOM05D003751 ORTHO05D004765 3.2e-25 118.6 82 72.0
CANSAT80G1362 Cannabis sativa HOM05D003751 ORTHO05D004765 3.2e-25 118.6 82 72.0
Haze_11929 Corylus avellana HOM05D003751 ORTHO05D004765 3.2e-25 118.6 76 78.9
A09p07270 Brassica napus HOM05D003751 ORTHO05D004765 4.2e-25 118.2 74 78.4
BraA03t13807Z Brassica rapa HOM05D003751 ORTHO05D004765 4.2e-25 118.2 74 81.1
BraA09t36376Z Brassica rapa HOM05D003751 ORTHO05D004765 4.2e-25 118.2 74 78.4
Carub.0008s2191 Capsella rubella HOM05D003751 ORTHO05D004765 4.2e-25 118.2 74 79.7
CiPaw.05G127300 Carya illinoinensis HOM05D003751 ORTHO05D004765 4.2e-25 118.2 71 78.9
Ciclev10021138m.g Citrus clementina HOM05D003751 ORTHO05D004765 4.2e-25 118.2 71 77.5
MD16G1063500 Malus domestica HOM05D003751 ORTHO05D004765 4.2e-25 118.2 86 69.8
Sed0012304 Sechium edule HOM05D003751 ORTHO05D004765 4.2e-25 118.2 61 88.5
Sed0016795 Sechium edule HOM05D003751 ORTHO05D004765 4.2e-25 118.2 75 77.3
Thecc.03G096900 Theobroma cacao HOM05D003751 ORTHO05D004765 4.2e-25 118.2 62 85.5
TWI79G0662 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 4.2e-25 118.2 73 78.1
AL8G37900 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 5.5e-25 117.9 73 75.3
Gohir.D02G128600 Gossypium hirsutum HOM05D003751 ORTHO05D004765 5.5e-25 117.9 76 78.9
Gorai.005G144300 Gossypium raimondii HOM05D003751 ORTHO05D004765 5.5e-25 117.9 76 78.9
Potri.010G160700 Populus trichocarpa HOM05D003751 ORTHO05D004765 5.5e-25 117.9 71 80.3
Sp2g24470 Schrenkiella parvula HOM05D003751 ORTHO05D004765 5.5e-25 117.9 74 78.4
CARHR274990 Cardamine hirsuta HOM05D003751 ORTHO05D004765 7.2e-25 117.5 73 75.3
COL.COLO4_36892 Corchorus olitorius HOM05D003751 ORTHO05D004765 7.2e-25 117.5 72 77.8
Gohir.A07G069400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 7.2e-25 117.5 74 77.0
Gohir.D07G073800 Gossypium hirsutum HOM05D003751 ORTHO05D004765 7.2e-25 117.5 74 77.0
Gorai.001G078000 Gossypium raimondii HOM05D003751 ORTHO05D004765 7.2e-25 117.5 74 77.0
Lalb_Chr10g0098641 Lupinus albus HOM05D003751 ORTHO05D004765 7.2e-25 117.5 78 74.4
Manes.01G029800 Manihot esculenta HOM05D003751 ORTHO05D004765 7.2e-25 117.5 71 78.9
PSO063G1864 Papaver somniferum HOM05D003751 ORTHO05D004765 7.2e-25 117.5 71 78.9
PSO384G1483 Papaver somniferum HOM05D003751 ORTHO05D004765 7.2e-25 117.5 71 78.9
BcaC04g23458 Brassica carinata HOM05D003751 ORTHO05D004765 9.4e-25 117.1 74 78.4
BcaC06g33170 Brassica carinata HOM05D003751 ORTHO05D004765 9.4e-25 117.1 66 81.8
TWI75G1095 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 9.4e-25 117.1 73 78.1
Sc11g0002320 Simmondsia chinensis HOM05D003751 ORTHO05D004765 1.2e-24 116.7 73 76.7
Zm00001eb008460 Zea mays HOM05D003751 ORTHO05D004765 1.2e-24 116.7 82 69.5
C09p08130 Brassica napus HOM05D003751 ORTHO05D004765 1.6e-24 116.3 74 77.0
CiPaw.06G090700 Carya illinoinensis HOM05D003751 ORTHO05D004765 1.6e-24 116.3 71 77.5
THA.LOC104801343 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 1.6e-24 116.3 73 75.3
MBI16_g16360_MAGBIO Magnolia biondii HOM05D003751 ORTHO05D004765 2.1e-24 115.9 66 83.3
Duzib205G0623 Durio zibethinus HOM05D003751 ORTHO05D004765 2.7e-24 115.5 74 75.7
Eucgr.B03173 Eucalyptus grandis HOM05D003751 ORTHO05D004765 3.6e-24 115.2 76 75.0
THA.LOC104818332 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 3.6e-24 115.2 74 77.0
PGR102G2931 Punica granatum HOM05D003751 ORTHO05D004765 4.7e-24 114.8 77 72.7
Cpa.g.sc94.5 Carica papaya HOM05D003751 ORTHO05D004765 6.1e-24 114.4 66 80.3
ClCG09G022210 Citrullus lanatus HOM05D003751 ORTHO05D004765 6.1e-24 114.4 92 66.3
MELO3C002928.2 Cucumis melo HOM05D003751 ORTHO05D004765 6.1e-24 114.4 78 73.1
Sabra10G0122300 Salix brachista HOM05D003751 ORTHO05D004765 6.1e-24 114.4 71 78.9
CDE07G1785 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 1.0e-23 113.6 82 68.3
Potri.008G093400 Populus trichocarpa HOM05D003751 ORTHO05D004765 1.0e-23 113.6 74 74.3
Duzib251G0914 Durio zibethinus HOM05D003751 ORTHO05D004765 1.4e-23 113.2 71 76.1
Sabra08G0070200 Salix brachista HOM05D003751 ORTHO05D004765 1.4e-23 113.2 74 73.0
Thecc.02G335000 Theobroma cacao HOM05D003751 ORTHO05D004765 1.4e-23 113.2 75 74.7
Ah.03g139090 Amaranthus hybridus HOM05D003751 ORTHO05D004765 1.8e-23 112.8 73 76.7
CDE04G0854 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 1.8e-23 112.8 74 74.3
Os03g0211900 Oryza sativa ssp. japonica HOM05D003751 ORTHO05D004765 1.8e-23 112.8 85 68.2
SHI26375 Sapria himalayana HOM05D003751 ORTHO05D004765 4.0e-23 111.7 77 68.8
Hund14089 Selenicereus undatus HOM05D003751 ORTHO05D004765 5.2e-23 111.3 73 75.3
THA.LOC104824065 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 5.2e-23 111.3 73 74.0
COL.COLO4_27919 Corchorus olitorius HOM05D003751 ORTHO05D004765 8.8e-23 110.5 83 69.9
SalBow2G0317 Salvia bowleyana HOM05D003751 ORTHO05D004765 8.8e-23 110.5 123 51.2
CsaV3_5G025510 Cucumis sativus L. HOM05D003751 ORTHO05D004765 2.0e-22 109.4 75 73.3
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 5.7e-22 107.8 85 60.0
AT1G13910 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 7.5e-22 107.5 84 61.9
Peaxi162Scf00314g00122 Petunia axillaris HOM05D003751 ORTHO05D004765 7.5e-22 107.5 52 94.2
Sp1g12050 Schrenkiella parvula HOM05D003751 ORTHO05D004765 1.3e-21 106.7 84 61.9
AL1G25740 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 2.8e-21 105.5 66 74.2
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 4.8e-21 104.8 63 77.8
Thhalv10008166m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 1.1e-20 103.6 84 59.5
Dinv34089 Davidia involucrata HOM05D003751 ORTHO05D004765 1.8e-20 102.8 52 90.4
Carub.0001s1361 Capsella rubella HOM05D003751 ORTHO05D004765 9.1e-20 100.5 83 60.2
CARHR014280 Cardamine hirsuta HOM05D003751 ORTHO05D004765 5.0e-18 94.7 84 56.0
DCAR_007183 Daucus carota HOM05D003751 ORTHO05D004765 4.2e-17 91.7 62 72.6
Nitab4.5_0004304g0080 Nicotiana tabacum HOM05D003751 ORTHO05D004765 4.2e-17 91.7 54 75.9
Sopen05g021560 Solanum pennellii HOM05D003751 ORTHO05D004765 9.4e-17 90.5 52 78.8
Hund25193 Selenicereus undatus HOM05D003751 ORTHO05D004765 1.2e-16 90.1 52 76.9
CSS0000444 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 2.1e-16 89.4 82 58.5
SEGI_40768 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 8.0e-16 87.4 66 62.1
SMO307G0068 Selaginella moellendorffii HOM05D003751 ORTHO05D004765 4.4e-14 81.6 52 63.5
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis HOM05D003751 ORTHO05D004765 7.5e-14 80.9 74 56.8
Sopen05g021540 Solanum pennellii HOM05D003751 ORTHO05D004765 8.3e-13 77.4 63 65.1
Dinv16710 Davidia involucrata HOM05D003751 ORTHO05D004765 4.1e-12 75.1 45 82.2
Nitab4.5_0017073g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 3.5e-11 72.0 32 90.6
SMO239G0097 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 2.5e-09 65.9 41 61.0
SMO239G0021 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 2.1e-08 62.8 86 40.7
Actinidia28633 Actinidia chinensis HOM05D003751 ORTHO05D004765 4.7e-08 61.6 31 87.1
BraA02t09094Z Brassica rapa HOM05D003751 ORTHO05D004765 1.2e-06 57.0 67 49.3


User provided reference genes

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