Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 1.6e-21 105.1 51 100.0
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 6.6e-20 99.8 50 94.0
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 8.6e-20 99.4 50 94.0
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 1.1e-19 99.0 50 94.0
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 4.3e-19 97.1 50 92.0
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 3.6e-18 94.0 50 86.0
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 1.4e-17 92.0 50 86.0
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.4e-17 92.0 50 84.0
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 2.4e-17 91.3 50 80.0
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 2.4e-17 91.3 50 88.0
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 2.4e-17 91.3 50 88.0
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 3.1e-17 90.9 50 88.0
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 3.1e-17 90.9 50 86.0
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 5.2e-17 90.1 50 84.0
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 5.2e-17 90.1 50 84.0
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 5.2e-17 90.1 50 86.0
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 5.2e-17 90.1 50 84.0
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 6.8e-17 89.7 50 84.0
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 6.8e-17 89.7 50 84.0
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 6.8e-17 89.7 50 86.0
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 6.8e-17 89.7 50 84.0
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 6.8e-17 89.7 50 82.0
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 8.9e-17 89.4 50 84.0
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 8.9e-17 89.4 50 84.0
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 8.9e-17 89.4 50 84.0
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 8.9e-17 89.4 50 84.0
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 8.9e-17 89.4 50 84.0
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 8.9e-17 89.4 50 82.0
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 1.5e-16 88.6 50 80.0
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 1.5e-16 88.6 50 80.0
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 1.5e-16 88.6 50 82.0
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 2.0e-16 88.2 50 84.0
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 2.6e-16 87.8 50 82.0
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 2.6e-16 87.8 50 82.0
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 2.6e-16 87.8 50 82.0
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 3.4e-16 87.4 50 78.0
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 3.4e-16 87.4 50 82.0
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 3.4e-16 87.4 50 80.0
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 3.4e-16 87.4 50 80.0
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 3.4e-16 87.4 50 82.0
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 4.4e-16 87.0 50 82.0
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 4.4e-16 87.0 50 80.0
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 5.8e-16 86.7 50 82.0
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 5.8e-16 86.7 50 78.0
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 5.8e-16 86.7 50 80.0
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 5.8e-16 86.7 50 84.0
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 7.6e-16 86.3 50 82.0
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 7.6e-16 86.3 50 80.0
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 7.6e-16 86.3 50 82.0
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 9.9e-16 85.9 50 78.0
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 1.3e-15 85.5 50 74.0
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 1.3e-15 85.5 50 74.0
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 1.3e-15 85.5 50 74.0
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 1.3e-15 85.5 50 78.0
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 1.3e-15 85.5 50 78.0
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 1.3e-15 85.5 50 78.0
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.7e-15 85.1 50 80.0
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 2.2e-15 84.7 50 78.0
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 2.9e-15 84.3 49 79.6
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.9e-15 84.3 50 78.0
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 3.8e-15 84.0 50 78.0
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 3.8e-15 84.0 50 78.0
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 3.8e-15 84.0 50 82.0
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 4.9e-15 83.6 49 79.6
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.9e-15 83.6 50 78.0
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 6.4e-15 83.2 50 76.0
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 6.4e-15 83.2 50 76.0
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 6.4e-15 83.2 50 76.0
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 6.4e-15 83.2 50 78.0
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 1.1e-14 82.4 50 80.0
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 1.4e-14 82.0 49 81.6
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 1.4e-14 82.0 50 72.0
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.4e-14 82.0 50 72.0
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.4e-14 82.0 50 72.0
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 1.4e-14 82.0 50 80.0
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 1.4e-14 82.0 50 76.0
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.9e-14 81.6 50 76.0
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 2.4e-14 81.3 50 76.0
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 2.4e-14 81.3 50 76.0
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 2.4e-14 81.3 50 78.0
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 2.4e-14 81.3 50 78.0
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 2.4e-14 81.3 50 76.0
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 3.2e-14 80.9 50 76.0
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 3.2e-14 80.9 50 76.0
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 7.1e-14 79.7 50 76.0
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 7.1e-14 79.7 50 80.0
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 7.1e-14 79.7 50 76.0
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 9.2e-14 79.3 50 72.0
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 1.2e-13 79.0 50 80.0
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 1.2e-13 79.0 50 76.0
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 1.6e-13 78.6 50 78.0
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.6e-13 78.6 48 77.1
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 2.1e-13 78.2 50 74.0
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 2.1e-13 78.2 50 76.0
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 4.6e-13 77.0 50 74.0
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 4.6e-13 77.0 50 72.0
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 6.0e-13 76.6 50 72.0
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 7.8e-13 76.3 50 70.0
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.3e-12 75.5 50 74.0
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 1.7e-12 75.1 77 53.2
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 5.1e-12 73.6 50 68.0
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 5.1e-12 73.6 50 68.0
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 1.1e-11 72.4 50 64.0
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 1.9e-11 71.6 50 66.0
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 2.5e-11 71.2 50 70.0
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 1.3e-10 68.9 50 68.0
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 1.6e-10 68.6 50 64.0
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 2.1e-10 68.2 50 68.0
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 2.1e-10 68.2 50 68.0
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 2.1e-10 68.2 50 68.0
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 2.1e-10 68.2 50 68.0
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 2.1e-10 68.2 50 68.0
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 2.1e-10 68.2 50 68.0
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 2.1e-10 68.2 50 68.0
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 2.1e-10 68.2 80 48.8
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.1e-10 68.2 50 68.0
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 2.8e-10 67.8 39 79.5
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 6.2e-10 66.6 50 60.0
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 6.9e-09 63.2 50 54.0
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 3.8e-07 57.4 32 75.0


User provided reference genes

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