Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031375.1 Olea europaea HOM05D000735 ORTHO05D004669 8.9e-87 323.6 162 100.0
Oeu025986.1 Olea europaea HOM05D000735 ORTHO05D004669 5.6e-81 304.3 161 94.4
Nn1g08298 Nelumbo nucifera HOM05D000735 ORTHO05D004669 5.4e-76 287.7 160 89.4
Actinidia01459 Actinidia chinensis HOM05D000735 ORTHO05D004669 7.1e-76 287.3 160 88.8
Haze_07068 Corylus avellana HOM05D000735 ORTHO05D004669 2.1e-75 285.8 160 87.5
QL05p065759 Quercus lobata HOM05D000735 ORTHO05D004669 6.0e-75 284.3 163 87.7
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 7.9e-75 283.9 166 84.9
TWI63G0350 Tripterygium wilfordii HOM05D000735 ORTHO05D004669 1.3e-74 283.1 159 86.8
COL.COLO4_31970 Corchorus olitorius HOM05D000735 ORTHO05D004669 1.1e-73 280.0 160 85.0
Cc09_g00020 Coffea canephora HOM05D000735 ORTHO05D004669 1.5e-73 279.6 160 86.9
Prupe.4G000200 Prunus persica HOM05D000735 ORTHO05D004669 1.9e-73 279.3 160 86.2
SalBow8G3892 Salvia bowleyana HOM05D000735 ORTHO05D004669 2.5e-73 278.9 160 86.2
TAR365G1081 Trochodendron aralioides HOM05D000735 ORTHO05D004669 3.3e-73 278.5 160 87.5
Thecc.06G244900 Theobroma cacao HOM05D000735 ORTHO05D004669 4.3e-73 278.1 160 85.6
GSVIVG01019361001 Vitis vinifera HOM05D000735 ORTHO05D004669 4.3e-73 278.1 160 85.0
Atru.chr1.2250_Atru.chr1.2251 Acer truncatum HOM05D000735 ORTHO05D004669 5.6e-73 277.7 159 85.5
Lj2A254G92 Lonicera japonica HOM05D000735 ORTHO05D004669 5.6e-73 277.7 160 85.6
FvH4_3g00030 Fragaria vesca HOM05D000735 ORTHO05D004669 9.6e-73 276.9 161 85.7
MD10G1342600 Malus domestica HOM05D000735 ORTHO05D004669 9.6e-73 276.9 160 85.6
Potri.016G000200 Populus trichocarpa HOM05D000735 ORTHO05D004669 9.6e-73 276.9 160 85.0
MD00G1208600 Malus domestica HOM05D000735 ORTHO05D004669 2.1e-72 275.8 160 86.2
PGR042G3067 Punica granatum HOM05D000735 ORTHO05D004669 4.8e-72 274.6 166 84.9
Aqoxy1G01335 Aquilegia oxysepala HOM05D000735 ORTHO05D004669 3.1e-71 271.9 160 84.4
ATR0568G110 Amborella trichopoda HOM05D000735 ORTHO05D004669 6.9e-71 270.8 162 83.3
FAN21G4060 Fragaria x ananassa HOM05D000735 ORTHO05D004669 6.9e-71 270.8 164 84.1
VMungo0540G1324 Vigna mungo HOM05D000735 ORTHO05D004669 6.9e-71 270.8 164 83.5
Solyc04g056600.4 Solanum lycopersicum HOM05D000735 ORTHO05D004669 9.0e-71 270.4 165 83.0
Sopen04g025520 Solanum pennellii HOM05D000735 ORTHO05D004669 9.0e-71 270.4 165 83.0
HanXRQChr16g0515311 Helianthus annuus HOM05D000735 ORTHO05D004669 1.2e-70 270.0 160 83.8
FAN25G1440 Fragaria x ananassa HOM05D000735 ORTHO05D004669 1.5e-70 269.6 164 83.5
CSS0035227 Camellia sinensis var. sinensis HOM05D000735 ORTHO05D004669 2.6e-70 268.9 170 81.8
ECA247G3031 Erigeron canadensis HOM05D000735 ORTHO05D004669 2.6e-70 268.9 160 83.8
RcHm_v2.0_Chr5g0000031 Rosa chinensis HOM05D000735 ORTHO05D004669 4.5e-70 268.1 161 84.5
Lalb_Chr20g0119781 Lupinus albus HOM05D000735 ORTHO05D004669 5.8e-70 267.7 166 82.5
DCAR_022843 Daucus carota HOM05D000735 ORTHO05D004669 1.3e-69 266.5 162 82.1
Migut.M01487 Erythranthe guttata HOM05D000735 ORTHO05D004669 1.7e-69 266.2 162 84.0
Glyma.09G018200 Glycine max HOM05D000735 ORTHO05D004669 2.2e-69 265.8 164 80.5
Gohir.D01G023800 Gossypium hirsutum HOM05D000735 ORTHO05D004669 2.2e-69 265.8 160 82.5
HPP92_003015 Vanilla planifolia HOM05D000735 ORTHO05D004669 2.2e-69 265.8 160 82.5
CAN.G642.3 Capsicum annuum HOM05D000735 ORTHO05D004669 2.9e-69 265.4 164 81.7
Gorai.002G032300 Gossypium raimondii HOM05D000735 ORTHO05D004669 2.9e-69 265.4 160 81.9
unitig_26.g10052 Utricularia gibba HOM05D000735 ORTHO05D004669 3.8e-69 265.0 158 82.9
arahy.Tifrunner.gnm1.ann1.MYF06S Arachis hypogaea HOM05D000735 ORTHO05D004669 4.9e-69 264.6 205 68.8
Hma1.2p1_0394F.1_g143380 Hydrangea macrophylla HOM05D000735 ORTHO05D004669 4.9e-69 264.6 160 81.2
Glyma.15G124100 Glycine max HOM05D000735 ORTHO05D004669 6.4e-69 264.2 164 80.5
Ciclev10018215m.g Citrus clementina HOM05D000735 ORTHO05D004669 8.4e-69 263.8 159 83.0
Lsat_1_v5_gn_4_64520 Lactuca sativa HOM05D000735 ORTHO05D004669 8.4e-69 263.8 161 81.4
Manes.10G068400 Manihot esculenta HOM05D000735 ORTHO05D004669 8.4e-69 263.8 160 82.5
Gohir.A01G036500 Gossypium hirsutum HOM05D000735 ORTHO05D004669 1.1e-68 263.5 158 81.6
PSO541G3261 Papaver somniferum HOM05D000735 ORTHO05D004669 1.1e-68 263.5 160 84.4
Medtr2g028230 Medicago truncatula HOM05D000735 ORTHO05D004669 3.2e-68 261.9 168 81.0
PSO675G6844 Papaver somniferum HOM05D000735 ORTHO05D004669 3.2e-68 261.9 161 84.5
Phvul.006G134033 Phaseolus vulgaris HOM05D000735 ORTHO05D004669 4.2e-68 261.5 164 81.1
Ca_00788_v3 Cicer arietinum L. HOM05D000735 ORTHO05D004669 5.5e-68 261.2 169 81.7
Ca_11371_v3 Cicer arietinum L. HOM05D000735 ORTHO05D004669 5.5e-68 261.2 169 81.7
Psat1g172120 Pisum sativum HOM05D000735 ORTHO05D004669 9.3e-68 260.4 167 81.4
MSTRG.7102 Avicennia marina HOM05D000735 ORTHO05D004669 1.2e-67 260.0 160 83.1
CiPaw.10G085400 Carya illinoinensis HOM05D000735 ORTHO05D004669 1.2e-67 260.0 168 81.0
CsaV3_1G015620 Cucumis sativus L. HOM05D000735 ORTHO05D004669 4.6e-67 258.1 162 81.5
Duzib192G0339 Durio zibethinus HOM05D000735 ORTHO05D004669 4.6e-67 258.1 160 80.6
Gorai.010G220200 Gossypium raimondii HOM05D000735 ORTHO05D004669 4.6e-67 258.1 159 80.5
CDE06G1452 Ceratophyllum demersum HOM05D000735 ORTHO05D004669 1.0e-66 256.9 160 81.9
Lj6g0025657 Lotus japonicus HOM05D000735 ORTHO05D004669 1.0e-66 256.9 174 78.2
Gohir.A06G181100 Gossypium hirsutum HOM05D000735 ORTHO05D004669 1.3e-66 256.5 159 80.5
Zm00001eb308990 Zea mays HOM05D000735 ORTHO05D004669 6.7e-66 254.2 160 78.1
Sed0022776 Sechium edule HOM05D000735 ORTHO05D004669 1.9e-65 252.7 162 80.2
Thhalv10018385m.g Eutrema salsugineum HOM05D000735 ORTHO05D004669 2.5e-65 252.3 160 80.6
Carub.0002s2649 Capsella rubella HOM05D000735 ORTHO05D004669 3.3e-65 251.9 160 80.6
THA.LOC104813594 Tarenaya hassleriana HOM05D000735 ORTHO05D004669 5.6e-65 251.1 161 78.9
Sp1g41910 Schrenkiella parvula HOM05D000735 ORTHO05D004669 9.6e-65 250.4 168 76.2
AL1G64590 Arabidopsis lyrata HOM05D000735 ORTHO05D004669 1.3e-64 250.0 168 76.2
AT1G54370 Arabidopsis thaliana HOM05D000735 ORTHO05D004669 1.3e-64 250.0 168 76.2
Sc25g0001880 Simmondsia chinensis HOM05D000735 ORTHO05D004669 2.1e-64 249.2 159 76.1
AT1G79610 Arabidopsis thaliana HOM05D000735 ORTHO05D004669 2.8e-64 248.8 160 79.4
Glyma.07G270400 Glycine max HOM05D000735 ORTHO05D004669 2.8e-64 248.8 161 78.9
vmacro03581 Vaccinium macrocarpon HOM05D000735 ORTHO05D004669 4.8e-64 248.1 168 78.0
Carub.0001s4478 Capsella rubella HOM05D000735 ORTHO05D004669 6.2e-64 247.7 168 75.6
Gohir.D06G187900 Gossypium hirsutum HOM05D000735 ORTHO05D004669 6.2e-64 247.7 159 79.2
HPP92_027541 Vanilla planifolia HOM05D000735 ORTHO05D004669 6.2e-64 247.7 160 78.1
Lalb_Chr18g0057591 Lupinus albus HOM05D000735 ORTHO05D004669 1.1e-63 246.9 164 78.0
Os09g0286400 Oryza sativa ssp. japonica HOM05D000735 ORTHO05D004669 1.8e-63 246.1 160 76.9
CARHR073340 Cardamine hirsuta HOM05D000735 ORTHO05D004669 2.4e-63 245.7 161 77.6
Thhalv10011392m.g Eutrema salsugineum HOM05D000735 ORTHO05D004669 5.3e-63 244.6 168 75.0
TPR.G10488 Trifolium pratense HOM05D000735 ORTHO05D004669 5.3e-63 244.6 173 74.0
AL2G40300 Arabidopsis lyrata HOM05D000735 ORTHO05D004669 6.9e-63 244.2 160 78.1
Sp5g34680 Schrenkiella parvula HOM05D000735 ORTHO05D004669 1.5e-62 243.0 160 77.5
A07p27040 Brassica napus HOM05D000290 ORTHO05D006513 2.6e-62 242.3 160 77.5
C06p29770 Brassica napus HOM05D000290 ORTHO05D006513 2.6e-62 242.3 160 77.5
BolC6t38138H Brassica oleracea HOM05D000290 ORTHO05D006513 2.6e-62 242.3 160 77.5
BraA07t30348Z Brassica rapa HOM05D000290 ORTHO05D006513 2.6e-62 242.3 160 77.5
AUR62017691 Chenopodium quinoa HOM05D000735 ORTHO05D004669 3.4e-62 241.9 159 74.2
ClCG01G011310 Citrullus lanatus HOM05D000735 ORTHO05D004669 1.3e-61 240.0 167 76.0
Phvul.003G089800 Phaseolus vulgaris HOM05D000735 ORTHO05D004669 1.3e-61 240.0 166 76.5
AUR62015223 Chenopodium quinoa HOM05D000735 ORTHO05D004669 2.9e-61 238.8 159 73.0
Aa31LG4G1360 Aethionema arabicum HOM05D000735 ORTHO05D004669 4.9e-61 238.0 168 75.0
EL10Ac9g22942 Beta vulgaris HOM05D000735 ORTHO05D004669 6.5e-61 237.7 159 73.0
Ah.01g012230 Amaranthus hybridus HOM05D000735 ORTHO05D004669 1.9e-60 236.1 163 71.8
C06p53470 Brassica napus HOM05D000735 ORTHO05D004669 1.0e-58 230.3 166 72.9
BolC6t40362H Brassica oleracea HOM05D000735 ORTHO05D004669 1.0e-58 230.3 166 72.9
BraA07t31972Z Brassica rapa HOM05D000735 ORTHO05D004669 1.0e-58 230.3 166 72.9
A07p44630 Brassica napus HOM05D000735 ORTHO05D004669 1.8e-58 229.6 166 71.7
BcaC08g47521 Brassica carinata HOM05D000735 ORTHO05D004669 3.7e-56 221.9 162 71.0
arahy.Tifrunner.gnm1.ann1.3U55TZ Arachis hypogaea HOM05D000735 ORTHO05D004669 4.8e-56 221.5 167 68.9
Nitab4.5_0000083g0040 Nicotiana tabacum HOM05D000735 ORTHO05D004669 1.4e-55 219.9 136 82.4
Eucgr.E04240 Eucalyptus grandis HOM05D000735 ORTHO05D004669 1.5e-54 216.5 145 79.3
SHI24427 Sapria himalayana HOM05D000735 ORTHO05D004669 2.6e-54 215.7 127 84.3
Nitab4.5_0000276g0160 Nicotiana tabacum HOM05D000735 ORTHO05D004669 1.3e-53 213.4 142 78.9
Pp3c13_14340 Physcomitrium patens HOM05D000735 ORTHO05D004669 7.4e-49 197.6 162 64.2
Peaxi162Scf00529g00815 Petunia axillaris HOM05D000735 ORTHO05D004669 2.2e-48 196.1 165 65.5
Hund24367 Selenicereus undatus HOM05D000735 ORTHO05D004669 5.9e-46 188.0 144 66.7
VMungo1215G1296 Vigna mungo HOM05D000735 ORTHO05D004669 2.5e-44 182.6 139 70.5
SMO367G0875 Selaginella moellendorffii HOM05D000735 ORTHO05D004669 1.0e-42 177.2 121 73.6
arahy.Tifrunner.gnm1.ann1.LC1B8P Arachis hypogaea HOM05D000735 ORTHO05D004669 6.7e-42 174.5 138 66.7
Mapoly0001s0256 Marchantia polymorpha HOM05D000735 ORTHO05D004669 1.1e-41 173.7 165 57.0
MELO3C027105.2 Cucumis melo HOM05D000735 ORTHO05D004669 3.7e-40 168.7 99 85.9
AagrBONN_evm.TU.Sc2ySwM_228.2563 Anthoceros agrestis HOM05D000735 ORTHO05D004669 6.3e-40 167.9 164 57.3
CARHR046050 Cardamine hirsuta HOM05D000735 ORTHO05D004669 1.1e-33 147.1 115 71.3
Mapoly0058s0105 Marchantia polymorpha HOM05D000735 ORTHO05D004669 1.4e-26 123.6 115 53.0
CBR_g4710 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-26 122.1 115 50.4
A02p23020 Brassica napus HOM05D000735 ORTHO05D004669 7.5e-25 117.9 90 62.2
BraA02t07299Z Brassica rapa HOM05D000735 ORTHO05D004669 7.5e-25 117.9 90 62.2
CBR_g54785 Chara braunii HOM05D000735 ORTHO05D004669 5.9e-22 108.2 134 42.5
Oeu025985.1 Olea europaea HOM05D000641 ORTHO05D007351 3.8e-21 105.5 63 85.7
Rhsim13G0137400 Rhododendron simsii HOM05D000735 ORTHO05D004669 5.0e-21 105.1 101 60.4
Zm00001eb316390 Zea mays HOM05D000735 ORTHO05D004669 7.2e-20 101.3 62 71.0
SMO364G0202 Selaginella moellendorffii HOM05D000735 ORTHO05D004669 2.1e-19 99.8 101 50.5
Rhsim13G0137600 Rhododendron simsii HOM05D000735 ORTHO05D004669 4.7e-19 98.6 65 78.5
Pp3c7_5300 Physcomitrium patens HOM05D000735 ORTHO05D004669 2.3e-18 96.3 102 45.1
PRCOL_00002497 Prasinoderma coloniale HOM05D000735 ORTHO05D004669 3.4e-17 92.4 115 40.0
Pp3c9_15590 Physcomitrium patens HOM05D000735 ORTHO05D004669 4.4e-17 92.0 149 39.6
MCO07G302 Micromonas commoda HOM05D000735 ORTHO05D004669 5.4e-15 85.1 105 44.8
HanXRQChr14g0455071 Helianthus annuus HOM05D000735 ORTHO05D004669 7.7e-14 81.3 68 63.2
Cre02.g144550 Chlamydomonas reinhardtii HOM05D000735 ORTHO05D004669 1.9e-12 76.6 104 39.4
Cre16.g671250 Chlamydomonas reinhardtii HOM05D000735 ORTHO05D004669 2.5e-12 76.3 104 39.4
Cre13.g589800 Chlamydomonas reinhardtii HOM05D000735 ORTHO05D004669 2.7e-11 72.8 113 35.4
SEGI_16122 Sequoiadendron giganteum HOM05D000735 ORTHO05D004669 5.2e-10 68.6 88 48.9
MCO01G278 Micromonas commoda HOM05D000735 ORTHO05D004669 6.8e-10 68.2 109 39.4
Dinv04373 Davidia involucrata HOM05D000735 ORTHO05D004669 1.4e-07 60.5 35 80.0
Cpa.g.sc31.47 Carica papaya HOM05D000735 ORTHO05D004669 4.1e-07 58.9 33 78.8


User provided reference genes

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