Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 8.4e-151 537.0 264 100.0
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 1.6e-117 426.4 267 77.9
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 6.7e-116 421.0 268 76.9
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 1.7e-114 416.4 274 75.5
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.7e-114 416.4 233 84.5
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.8e-113 412.9 285 73.0
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 2.0e-112 409.5 285 72.3
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.0e-112 409.5 274 73.0
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 1.3e-111 406.8 252 77.8
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 1.7e-111 406.4 268 73.9
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 2.2e-111 406.0 267 74.2
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 3.8e-111 405.2 291 69.8
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 1.9e-110 402.9 282 72.3
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.9e-110 402.9 285 70.5
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 3.2e-110 402.1 273 72.5
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 5.5e-110 401.4 273 71.4
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 7.2e-110 401.0 223 84.3
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 7.2e-110 401.0 291 69.8
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 9.4e-110 400.6 277 73.3
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 9.4e-110 400.6 277 73.3
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.2e-109 400.2 223 85.7
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 1.6e-109 399.8 269 74.0
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.6e-109 399.8 276 71.7
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 4.7e-109 398.3 280 70.4
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 4.7e-109 398.3 275 71.6
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 4.7e-109 398.3 287 69.0
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 6.1e-109 397.9 280 69.6
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 7.9e-109 397.5 224 84.8
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.0e-108 397.1 248 79.4
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 1.0e-108 397.1 282 69.1
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.0e-108 397.1 225 82.2
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 1.4e-108 396.7 275 71.3
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 1.8e-108 396.4 223 85.2
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 1.8e-108 396.4 277 71.1
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 2.3e-108 396.0 282 68.8
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 3.0e-108 395.6 276 69.9
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 3.9e-108 395.2 279 69.5
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 5.1e-108 394.8 276 71.7
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 5.1e-108 394.8 240 77.5
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 5.1e-108 394.8 258 75.2
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.0e-107 392.9 282 68.8
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 2.6e-107 392.5 286 69.6
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.6e-107 392.5 270 71.1
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 3.3e-107 392.1 258 74.8
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 5.7e-107 391.3 224 81.7
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 5.7e-107 391.3 286 67.8
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 9.7e-107 390.6 253 75.5
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 9.7e-107 390.6 252 75.4
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.3e-106 390.2 271 72.0
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 1.3e-106 390.2 232 78.9
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 2.8e-106 389.0 287 67.2
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.7e-106 388.7 281 72.2
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 3.7e-106 388.7 269 71.4
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 6.3e-106 387.9 275 70.9
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 1.6e-104 383.3 262 71.8
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 4.5e-104 381.7 224 80.8
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 7.7e-104 380.9 268 69.4
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 7.7e-104 380.9 233 78.5
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.0e-103 380.6 222 81.1
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.0e-103 380.6 250 74.8
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.0e-103 380.6 281 67.6
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 5.0e-103 378.3 268 69.8
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 6.5e-103 377.9 252 73.4
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 8.5e-103 377.5 225 79.6
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 9.4e-102 374.0 223 78.0
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 2.1e-101 372.9 286 66.4
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.7e-101 372.5 230 75.7
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.0e-100 370.5 239 72.8
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.0e-100 370.5 224 78.1
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 1.0e-100 370.5 237 75.1
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.0e-100 368.6 269 68.8
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 6.7e-100 367.9 269 68.4
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.5e-99 366.7 276 68.1
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 1.5e-99 366.7 286 64.3
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 1.5e-99 366.7 229 75.5
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 2.0e-99 366.3 225 76.9
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 3.3e-99 365.5 277 66.4
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 7.5e-99 364.4 278 68.0
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 9.7e-99 364.0 221 78.3
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 2.8e-98 362.5 251 70.9
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 8.2e-98 360.9 234 74.8
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 2.4e-97 359.4 261 67.8
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 2.4e-97 359.4 261 67.8
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.0e-96 356.3 272 66.2
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 3.5e-96 355.5 240 70.4
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 4.5e-96 355.1 251 65.7
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 1.3e-95 353.6 226 72.1
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 3.8e-95 352.1 222 77.5
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 2.1e-93 346.3 224 76.8
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.4e-92 343.6 263 64.6
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 4.0e-92 342.0 231 72.7
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 4.0e-92 342.0 272 64.0
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.2e-91 340.5 278 62.9
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.8e-90 335.9 244 68.9
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 4.8e-90 335.1 278 62.2
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.1e-89 334.0 207 77.3
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.5e-86 323.6 268 63.4
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 1.5e-86 323.6 272 62.1
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 4.0e-84 315.5 282 59.2
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.0e-83 313.2 248 64.5
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 2.6e-83 312.8 265 58.5
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 3.4e-83 312.4 239 67.4
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 7.5e-83 311.2 233 64.4
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 1.3e-82 310.5 223 66.8
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 3.7e-82 308.9 174 83.9
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 8.3e-82 307.8 232 63.4
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 7.7e-80 301.2 273 59.7
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.7e-79 300.1 174 81.6
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 1.7e-79 300.1 230 69.6
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.9e-79 299.3 273 59.3
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 3.8e-79 298.9 233 65.2
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 1.6e-77 293.5 232 58.6
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.7e-77 292.0 165 81.8
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.4e-73 279.6 165 78.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.1e-70 270.8 167 78.4
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 1.1e-70 270.8 164 78.0
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 5.8e-67 258.5 213 59.2
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 1.5e-59 233.8 136 80.1
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.5e-54 217.2 154 68.2
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 6.2e-53 211.8 150 70.7
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 6.8e-52 208.4 131 75.6
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 2.0e-51 206.8 190 60.5
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 4.9e-50 202.2 156 66.0
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 1.3e-47 194.1 215 46.5
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 2.5e-46 189.9 242 48.3
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 2.2e-42 176.8 210 45.7
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 3.8e-42 176.0 191 55.5
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 3.5e-40 169.5 133 61.7
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.4e-33 146.7 91 74.7
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 1.4e-28 131.0 131 55.0
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 6.7e-23 112.1 90 56.7
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.5e-22 110.9 133 51.1
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.2e-21 105.5 127 46.5
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.2e-19 101.3 80 62.5
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 8.2e-13 78.6 119 35.3
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 5.3e-12 75.9 77 51.9
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 9.0e-12 75.1 41 75.6
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.2e-09 66.6 54 61.1
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 9.3e-09 65.1 84 38.1
PRCOL_00000981 Prasinoderma coloniale HOM05D006270 ORTHO05D007755 7.4e-06 55.5 65 43.1


User provided reference genes

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