Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 1.2e-104 383.3 212 100.0
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 4.6e-59 231.9 207 61.8
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.3e-58 230.3 210 62.9
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 2.5e-52 209.5 205 57.6
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 7.9e-51 204.5 205 58.0
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.5e-49 200.3 210 54.3
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 2.0e-49 199.9 210 58.1
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 4.3e-49 198.7 210 56.7
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 5.7e-49 198.4 209 57.9
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 9.7e-49 197.6 229 54.1
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 3.7e-48 195.7 214 57.9
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.1e-47 194.1 210 55.7
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 1.4e-47 193.7 204 56.9
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 6.9e-47 191.4 213 55.4
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 9.1e-47 191.0 210 56.2
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 3.4e-46 189.1 211 56.4
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 7.7e-46 188.0 202 55.0
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 3.2e-44 182.6 202 52.5
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 7.2e-44 181.4 211 52.1
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.6e-43 180.3 201 52.2
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 2.7e-43 179.5 202 52.5
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 3.6e-43 179.1 210 51.0
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 6.1e-43 178.3 197 56.9
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 6.1e-43 178.3 209 51.7
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.4e-42 177.2 221 52.5
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.8e-42 176.8 209 52.6
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 3.7e-40 169.1 231 46.8
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 4.8e-40 168.7 211 48.3
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 6.3e-40 168.3 209 49.8
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 8.2e-40 167.9 210 47.6
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 2.4e-39 166.4 202 50.5
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 5.3e-39 165.2 205 49.8
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 1.6e-38 163.7 197 51.3
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 3.5e-38 162.5 201 49.3
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.3e-37 160.6 149 61.7
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 2.2e-37 159.8 209 47.8
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 2.9e-37 159.5 218 50.9
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 6.5e-37 158.3 203 47.3
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 8.5e-37 157.9 201 50.7
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.2e-36 156.0 192 51.0
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 7.2e-36 154.8 201 50.7
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 1.0e-34 151.0 219 47.0
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 4.0e-34 149.1 201 47.8
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 3.3e-33 146.0 144 56.2
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 4.8e-32 142.1 150 54.7
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 4.8e-32 142.1 210 46.2
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 2.4e-31 139.8 151 53.0
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 2.4e-31 139.8 151 54.3
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 5.3e-31 138.7 153 53.6
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 7.0e-31 138.3 153 52.3
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 1.6e-30 137.1 201 46.3
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 2.0e-30 136.7 151 52.3
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 2.7e-30 136.3 201 46.3
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 2.7e-30 136.3 209 44.0
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 3.5e-30 136.0 152 52.6
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 3.5e-30 136.0 207 44.0
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 1.0e-29 134.4 202 45.0
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.0e-29 134.4 209 43.5
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.0e-29 134.4 209 43.5
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.9e-29 132.9 198 47.5
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 3.8e-29 132.5 148 53.4
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 3.8e-29 132.5 120 63.3
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 5.0e-29 132.1 161 46.6
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.5e-29 131.7 149 49.7
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 8.5e-29 131.3 144 52.8
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.9e-28 130.2 143 56.6
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.6e-27 125.9 188 44.7
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 1.8e-26 123.6 179 45.8
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 9.8e-25 117.9 117 58.1
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.3e-24 117.5 201 43.3
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 2.2e-24 116.7 111 59.5
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 6.3e-24 115.2 201 42.8
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.3e-24 115.2 144 46.5
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 7.0e-23 111.7 126 50.8
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 2.0e-22 110.2 125 51.2
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 3.5e-22 109.4 201 40.8
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 7.7e-22 108.2 152 45.4
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 7.2e-20 101.7 196 38.8
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 3.6e-19 99.4 117 48.7
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.1e-19 98.6 170 39.4
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 8.0e-19 98.2 99 58.6
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 1.6e-14 84.0 77 63.6
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.3e-13 80.1 96 44.8
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 3.8e-13 79.3 119 42.9
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.6e-13 78.6 84 47.6
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.6e-13 78.6 141 37.6
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 6.6e-13 78.6 208 33.2
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-12 77.8 89 50.6
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 1.9e-12 77.0 121 41.3
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 7.3e-12 75.1 122 40.2
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 9.5e-12 74.7 141 37.6
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 4.0e-10 69.3 74 51.4
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.2e-09 67.8 130 36.9
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 1.1e-07 61.2 210 30.0
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 1.8e-07 60.5 94 42.6
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 7.0e-07 58.5 110 38.2
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 2.0e-06 57.0 65 49.2
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 4.6e-06 55.8 127 33.1


User provided reference genes

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