Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031266.1 Olea europaea HOM05D000692 ORTHO05D288841 1.8e-23 111.7 54 100.0
SGA_v2.0_scaffold1G00172 Striga asiatica HOM05D000692 ORTHO05D000533 3.3e-09 64.3 58 53.4
Dinv30742 Davidia involucrata HOM05D000692 ORTHO05D000533 4.3e-09 63.9 58 55.2
Oeu042447.1 Olea europaea HOM05D000692 ORTHO05D000533 9.5e-09 62.8 58 51.7
Lj2P305T38 Lonicera japonica HOM05D000692 ORTHO05D000533 1.2e-08 62.4 58 51.7
Nitab4.5_0000420g0110 Nicotiana tabacum HOM05D000692 ORTHO05D000533 1.6e-08 62.0 58 48.3
Nitab4.5_0009189g0010 Nicotiana tabacum HOM05D000692 ORTHO05D000533 1.6e-08 62.0 58 48.3
Oeu052371.1 Olea europaea HOM05D000692 ORTHO05D000533 1.6e-08 62.0 58 53.4
Sopen02g019590 Solanum pennellii HOM05D000692 ORTHO05D000533 1.6e-08 62.0 58 50.0
Thecc.06G151000 Theobroma cacao HOM05D000692 ORTHO05D000533 2.1e-08 61.6 58 53.4
MSTRG.16241 Avicennia marina HOM05D000692 ORTHO05D000533 2.8e-08 61.2 58 50.0
Nitab4.5_0002275g0010 Nicotiana tabacum HOM05D000692 ORTHO05D000533 2.8e-08 61.2 58 50.0
COL.COLO4_31075 Corchorus olitorius HOM05D000692 ORTHO05D000533 3.6e-08 60.8 58 53.4
Peaxi162Scf00067g00193 Petunia axillaris HOM05D000692 ORTHO05D000533 3.6e-08 60.8 58 48.3
CAN.G702.37 Capsicum annuum HOM05D000692 ORTHO05D000533 4.7e-08 60.5 58 48.3
Nitab4.5_0012940g0030 Nicotiana tabacum HOM05D000692 ORTHO05D000533 4.7e-08 60.5 58 50.0
SalBow8G0770 Salvia bowleyana HOM05D000692 ORTHO05D000533 6.1e-08 60.1 58 51.7
PGSC0003DMG400021164 Solanum tuberosum HOM05D000692 ORTHO05D000533 6.1e-08 60.1 58 48.3
MSTRG.7486 Avicennia marina HOM05D000692 ORTHO05D000533 8.0e-08 59.7 58 50.0
RhsimUnG0055300 Rhododendron simsii HOM05D000692 ORTHO05D000533 8.0e-08 59.7 58 51.7
Ciclev10017099m.g Citrus clementina HOM05D000692 ORTHO05D000533 1.0e-07 59.3 58 51.7
Hma1.2p1_0286F.1_g113980 Hydrangea macrophylla HOM05D000692 ORTHO05D000533 1.0e-07 59.3 58 50.0
PGR042G2765 Punica granatum HOM05D000692 ORTHO05D000533 1.4e-07 58.9 58 50.0
Cc09_g03380 Coffea canephora HOM05D000692 ORTHO05D000533 1.8e-07 58.5 58 48.3
Sabra04G0043000 Salix brachista HOM05D000692 ORTHO05D000533 1.8e-07 58.5 58 50.0
HanXRQChr15g0486521 Helianthus annuus HOM05D000692 ORTHO05D000533 2.3e-07 58.2 58 53.4
Solyc08g016580.1 Solanum lycopersicum HOM05D000692 ORTHO05D000533 2.3e-07 58.2 58 48.3
Cc00_g12080 Coffea canephora HOM05D000692 ORTHO05D000533 3.1e-07 57.8 58 46.6
QL05p058278 Quercus lobata HOM05D000692 ORTHO05D000533 3.1e-07 57.8 58 46.6
Sopen08g006950 Solanum pennellii HOM05D000692 ORTHO05D000533 4.0e-07 57.4 58 46.6
Lsat_1_v5_gn_8_116801 Lactuca sativa HOM05D000692 ORTHO05D000533 6.8e-07 56.6 58 44.8
PGSC0003DMG400009652 Solanum tuberosum HOM05D000692 ORTHO05D000533 6.8e-07 56.6 58 48.3
Eucgr.E02409 Eucalyptus grandis HOM05D000692 ORTHO05D000533 8.9e-07 56.2 58 46.6
CSS0022498 Camellia sinensis var. sinensis HOM05D000692 ORTHO05D000533 1.2e-06 55.8 58 50.0
Gohir.A04G090100 Gossypium hirsutum HOM05D000692 ORTHO05D000533 1.2e-06 55.8 57 45.6
ATR0044G031 Amborella trichopoda HOM05D000692 ORTHO05D000533 1.5e-06 55.5 58 48.3
DCAR_002175 Daucus carota HOM05D000692 ORTHO05D000533 1.5e-06 55.5 58 46.6
CiPaw.09G123900 Carya illinoinensis HOM05D000692 ORTHO05D000533 2.0e-06 55.1 58 44.8
Potri.004G064700 Populus trichocarpa HOM05D000692 ORTHO05D000533 2.0e-06 55.1 58 46.6
TAR627G1120 Trochodendron aralioides HOM05D000692 ORTHO05D000533 2.0e-06 55.1 58 44.8
GSVIVG01021449001 Vitis vinifera HOM05D000692 ORTHO05D000533 2.0e-06 55.1 58 46.6
Haze_05592 Corylus avellana HOM05D000692 ORTHO05D000533 2.6e-06 54.7 58 43.1
CDE02G0707 Ceratophyllum demersum HOM05D000692 ORTHO05D000533 3.4e-06 54.3 58 43.1
Gohir.A06G137300 Gossypium hirsutum HOM05D000692 ORTHO05D000533 3.4e-06 54.3 58 43.1
Gohir.D04G130200 Gossypium hirsutum HOM05D000692 ORTHO05D000533 3.4e-06 54.3 57 43.9
Gohir.D06G142500 Gossypium hirsutum HOM05D000692 ORTHO05D000533 3.4e-06 54.3 58 43.1
Gorai.010G166300 Gossypium raimondii HOM05D000692 ORTHO05D000533 3.4e-06 54.3 58 43.1
Gorai.012G113800 Gossypium raimondii HOM05D000692 ORTHO05D000533 3.4e-06 54.3 57 43.9
THA.LOC104806126 Tarenaya hassleriana HOM05D000692 ORTHO05D000533 3.4e-06 54.3 58 43.1
TAR626G1531 Trochodendron aralioides HOM05D000692 ORTHO05D000533 3.4e-06 54.3 58 53.4
Ah.09g233760 Amaranthus hybridus HOM05D000692 ORTHO05D000533 4.4e-06 53.9 58 46.6
CDE06G1749 Ceratophyllum demersum HOM05D000692 ORTHO05D000533 5.8e-06 53.5 58 43.1
Duzib187G1274 Durio zibethinus HOM05D000692 ORTHO05D000533 5.8e-06 53.5 57 43.9
Os01g0210600 Oryza sativa ssp. japonica HOM05D000692 ORTHO05D000533 5.8e-06 53.5 58 44.8
Prupe.4G080300 Prunus persica HOM05D000692 ORTHO05D000533 5.8e-06 53.5 58 43.1
MELO3C007135.2 Cucumis melo HOM05D000692 ORTHO05D000533 7.5e-06 53.1 58 41.4
Gorai.012G113900 Gossypium raimondii HOM05D000692 ORTHO05D000533 9.8e-06 52.8 57 43.9
Lj6g0016780 Lotus japonicus HOM05D000692 ORTHO05D000533 9.8e-06 52.8 58 43.1
Manes.15G121300 Manihot esculenta HOM05D000692 ORTHO05D000533 9.8e-06 52.8 58 43.1
HPP92_002849 Vanilla planifolia HOM05D000692 ORTHO05D000533 9.8e-06 52.8 58 46.6


User provided reference genes

Program Settings