Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 3.6e-89 331.6 177 100.0
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 3.6e-89 331.6 177 100.0
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 3.6e-89 331.6 177 100.0
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 8.4e-38 161.0 178 55.6
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.3e-35 153.7 179 57.0
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 1.9e-34 149.8 184 56.5
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 3.1e-32 142.5 186 54.8
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 3.1e-32 142.5 172 53.5
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 4.0e-32 142.1 170 52.9
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 6.9e-32 141.4 182 53.3
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 3.4e-31 139.0 185 50.8
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.7e-30 136.7 180 52.8
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 8.4e-30 134.4 120 65.0
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 8.4e-30 134.4 120 65.0
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 1.1e-29 134.0 127 62.2
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 2.4e-29 132.9 187 49.2
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 3.2e-29 132.5 178 50.0
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 4.2e-29 132.1 164 54.3
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.2e-28 130.6 145 56.6
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.6e-28 130.2 117 66.7
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 2.7e-28 129.4 175 47.4
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.5e-28 129.0 180 48.9
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 4.6e-28 128.6 122 60.7
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 6.0e-28 128.3 173 50.9
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 6.0e-28 128.3 117 65.8
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 6.0e-28 128.3 118 62.7
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 1.0e-27 127.5 172 49.4
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 1.3e-27 127.1 74 86.5
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.8e-27 126.7 129 58.9
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 3.0e-27 125.9 174 50.0
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.0e-27 125.9 118 61.0
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 3.0e-27 125.9 180 48.3
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 3.0e-27 125.9 172 49.4
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 3.9e-27 125.6 134 55.2
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 3.9e-27 125.6 120 60.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 5.1e-27 125.2 180 49.4
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 5.1e-27 125.2 178 51.1
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 6.7e-27 124.8 123 59.3
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 8.7e-27 124.4 132 55.3
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 1.1e-26 124.0 132 55.3
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 1.1e-26 124.0 127 57.5
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.1e-26 124.0 89 74.2
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.1e-26 124.0 177 48.6
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.5e-26 123.6 135 55.6
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 1.9e-26 123.2 132 55.3
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 1.9e-26 123.2 132 55.3
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 2.5e-26 122.9 119 58.8
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 3.3e-26 122.5 133 55.6
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 3.3e-26 122.5 184 47.3
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.3e-26 122.5 180 47.8
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 3.3e-26 122.5 119 63.0
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 4.3e-26 122.1 180 46.7
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 4.3e-26 122.1 112 64.3
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 5.6e-26 121.7 121 60.3
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 9.6e-26 120.9 176 46.0
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 9.6e-26 120.9 175 48.0
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 1.3e-25 120.6 121 57.0
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.3e-25 120.6 118 59.3
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.3e-25 120.6 131 55.0
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 1.6e-25 120.2 183 46.4
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 2.1e-25 119.8 179 47.5
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.7e-25 119.0 121 56.2
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.7e-25 119.0 186 45.7
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.8e-25 118.6 112 62.5
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.1e-24 117.5 179 46.4
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.8e-24 116.7 174 44.8
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.8e-24 116.7 91 69.2
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 1.8e-24 116.7 113 59.3
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 2.4e-24 116.3 174 48.3
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 3.1e-24 115.9 176 46.0
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 4.0e-24 115.5 97 67.0
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 4.0e-24 115.5 109 64.2
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 5.3e-24 115.2 172 50.0
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 6.9e-24 114.8 179 45.3
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 9.0e-24 114.4 81 75.3
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.2e-23 114.0 180 46.1
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.2e-23 114.0 121 55.4
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 1.5e-23 113.6 111 61.3
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.5e-23 113.6 111 61.3
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 1.5e-23 113.6 131 52.7
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.5e-23 113.6 160 49.4
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 7.6e-23 111.3 71 77.5
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 7.6e-23 111.3 93 64.5
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 7.6e-23 111.3 88 72.7
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 2.9e-22 109.4 111 58.6
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 3.8e-22 109.0 183 42.6
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 4.9e-22 108.6 179 44.1
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 8.4e-22 107.8 130 53.1
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 2.5e-21 106.3 117 51.3
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 5.5e-21 105.1 64 78.1
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 7.1e-21 104.8 164 43.3
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.5e-20 102.4 67 76.1
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 7.9e-20 101.3 150 45.3
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 3.0e-19 99.4 84 61.9
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 3.9e-19 99.0 76 68.4
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.3e-17 94.0 153 40.5
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 2.1e-17 93.2 137 44.5
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.8e-16 90.1 60 70.0
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 1.3e-14 84.0 65 64.6
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 2.7e-12 76.3 138 44.2
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.3e-11 73.9 135 37.8
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 6.7e-11 71.6 87 46.0
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 7.4e-10 68.2 51 66.7
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 4.5e-07 58.9 176 31.8
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 4.5e-07 58.9 112 38.4
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 2.2e-06 56.6 111 31.5


User provided reference genes

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