Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 1.0e-216 756.5 402 100.0
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 1.9e-162 576.2 402 79.1
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 1.9e-85 320.5 441 48.8
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 5.0e-70 269.2 340 51.5
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 7.2e-69 265.4 356 49.2
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 9.4e-69 265.0 384 47.7
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 2.6e-66 256.9 367 48.2
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 2.9e-62 243.4 338 49.1
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 6.5e-62 242.3 228 55.7
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 1.6e-60 237.7 357 44.8
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 1.6e-60 237.7 227 54.2
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 1.4e-59 234.6 340 47.4
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 8.8e-59 231.9 228 54.4
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 4.8e-57 226.1 358 45.3
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 6.3e-57 225.7 361 46.3
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 2.4e-56 223.8 387 42.1
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 7.0e-56 222.2 353 44.5
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 5.9e-55 219.2 332 41.6
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 1.3e-54 218.0 294 46.3
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.2e-54 217.2 331 45.6
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 2.9e-54 216.9 364 42.9
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 3.8e-54 216.5 326 48.2
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 5.5e-53 212.6 324 42.6
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 5.5e-53 212.6 324 42.6
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 9.4e-53 211.8 225 52.9
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 1.2e-52 211.5 269 48.0
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.6e-52 211.1 226 50.9
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 2.1e-52 210.7 230 50.9
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.1e-52 210.7 226 51.3
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 8.0e-52 208.8 227 52.0
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.3e-51 207.2 227 51.5
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 3.0e-51 206.8 230 51.7
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.0e-51 206.8 226 50.9
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 8.8e-51 205.3 226 50.4
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 8.8e-51 205.3 287 44.6
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 1.5e-50 204.5 338 42.3
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 4.4e-50 203.0 264 45.8
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 2.4e-48 197.2 248 48.0
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 4.5e-47 193.0 247 46.2
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 5.9e-47 192.6 218 47.2
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 1.0e-46 191.8 247 46.2
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 6.5e-46 189.1 315 40.0
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 3.2e-45 186.8 229 48.9
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 1.4e-43 181.4 328 40.5
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 4.0e-43 179.9 220 45.0
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 8.8e-43 178.7 220 44.5
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 1.2e-42 178.3 287 41.1
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 2.6e-42 177.2 251 43.4
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 2.6e-42 177.2 217 48.4
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 3.1e-40 170.2 209 46.4
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 1.2e-39 168.3 305 40.3
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 4.5e-39 166.4 211 49.3
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 5.9e-39 166.0 409 32.8
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 4.2e-37 159.8 297 39.4
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 2.8e-36 157.1 254 42.5
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 1.5e-34 151.4 217 44.2
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 3.4e-34 150.2 212 43.4
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 7.5e-34 149.1 256 38.3
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 1.7e-33 147.9 248 40.3
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 2.8e-33 147.1 212 45.3
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 6.3e-33 146.0 211 45.0
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 1.8e-32 144.4 222 42.3
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 2.0e-31 141.0 212 44.3
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 4.5e-31 139.8 361 38.8
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 5.9e-31 139.4 231 39.0
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 7.8e-31 139.0 365 37.3
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 2.9e-30 137.1 258 35.7
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 1.9e-29 134.4 210 42.4
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 5.6e-29 132.9 362 35.9
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 3.6e-28 130.2 198 39.4
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 3.6e-28 130.2 345 31.0
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 6.1e-28 129.4 222 36.9
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 8.0e-28 129.0 275 36.4
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 1.0e-27 128.6 210 36.2
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 1.0e-27 128.6 277 41.9
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 3.0e-27 127.1 207 40.6
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 6.8e-27 125.9 256 37.1
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 8.9e-27 125.6 208 38.0
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 2.6e-26 124.0 211 39.3
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 2.6e-26 124.0 221 38.9
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 7.5e-26 122.5 219 38.4
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 9.8e-26 122.1 256 32.8
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 1.7e-25 121.3 256 32.8
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 2.2e-25 120.9 214 40.2
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 2.2e-25 120.9 214 40.2
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 1.7e-22 111.3 331 30.8
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 5.6e-21 106.3 299 31.4
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 1.2e-20 105.1 222 32.0
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 1.6e-20 104.8 343 31.2
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 6.2e-20 102.8 242 32.6
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 1.4e-19 101.7 205 32.2
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 1.4e-19 101.7 269 30.9
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.8e-19 101.3 207 34.3
Lj9P565T15 Lonicera japonica HOM05D006954 ORTHO05D008729 5.2e-19 99.8 213 39.0
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 5.2e-19 99.8 291 30.2
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 3.4e-18 97.1 201 34.3
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 9.8e-18 95.5 206 31.6
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.3e-17 95.1 208 30.8
QL04p036188 Quercus lobata HOM05D006954 ORTHO05D008729 1.7e-17 94.7 322 34.5
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.2e-17 94.4 206 31.1
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 4.9e-17 93.2 268 28.4
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.4e-16 90.9 219 30.6
Nitab4.5_0001076g0060 Nicotiana tabacum HOM05D020458 ORTHO05D022160 7.0e-16 89.4 213 31.9
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 1.6e-15 88.2 225 29.8
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 1.3e-14 85.1 224 29.5
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 1.7e-14 84.7 84 52.4
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 1.1e-13 82.0 252 30.2
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 2.5e-13 80.9 208 30.8
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 5.6e-13 79.7 181 32.6
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 7.3e-13 79.3 255 28.6
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 8.1e-12 75.9 242 31.4
Thecc.03G251300 Theobroma cacao HOM05D006954 ORTHO05D008729 5.2e-11 73.2 83 45.8
PGSC0003DMG400011881 Solanum tuberosum HOM05D020458 ORTHO05D022160 4.9e-09 66.6 94 38.3
Sopen06g020850 Solanum pennellii HOM05D020458 ORTHO05D022160 1.1e-08 65.5 121 33.9
Solyc06g060730.3 Solanum lycopersicum HOM05D020458 ORTHO05D022160 1.4e-08 65.1 105 35.2
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 4.1e-08 63.5 192 27.6
Nn3g17397 Nelumbo nucifera HOM05D005220 ORTHO05D006082 5.4e-08 63.2 189 29.1
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 1.2e-07 62.0 194 26.3
Cc07_g04000 Coffea canephora HOM05D005220 ORTHO05D006082 1.6e-07 61.6 202 26.7
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 2.1e-07 61.2 192 28.1
CSS0002601 Camellia sinensis var. sinensis HOM05D005220 ORTHO05D006082 4.6e-07 60.1 189 27.0
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 1.0e-06 58.9 211 28.0
Actinidia22764 Actinidia chinensis HOM05D006954 ORTHO05D008729 1.7e-06 58.2 149 30.9
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 1.7e-06 58.2 36 61.1
Lalb_Chr17g0337031 Lupinus albus HOM05D005220 ORTHO05D006082 1.7e-06 58.2 187 25.7
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 1.7e-06 58.2 189 25.9
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 3.0e-06 57.4 189 26.5
Phvul.008G035000 Phaseolus vulgaris HOM05D005220 ORTHO05D006082 5.1e-06 56.6 193 26.4
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 6.6e-06 56.2 32 62.5
TPR.G12226 Trifolium pratense HOM05D005220 ORTHO05D006082 6.6e-06 56.2 200 26.5


User provided reference genes

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