Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 1.9e-107 392.5 196 100.0
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.7e-63 246.5 191 67.0
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.4e-62 243.4 195 65.6
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 2.3e-60 236.1 196 63.3
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 3.9e-60 235.3 200 59.0
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 6.6e-60 234.6 196 64.8
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 4.3e-59 231.9 193 64.2
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 7.3e-59 231.1 191 64.4
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 7.3e-59 231.1 195 64.6
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 9.5e-59 230.7 193 64.2
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 9.5e-59 230.7 193 63.7
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 9.5e-59 230.7 196 64.8
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 1.6e-58 229.9 196 61.7
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 2.1e-58 229.6 200 62.0
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 2.8e-58 229.2 196 64.8
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 3.6e-58 228.8 197 60.9
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 3.6e-58 228.8 197 60.4
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 1.4e-57 226.9 200 60.0
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 1.8e-57 226.5 195 63.1
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 2.4e-57 226.1 196 63.8
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 1.5e-56 223.4 216 55.1
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 2.0e-56 223.0 201 57.2
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 2.0e-56 223.0 189 63.5
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 2.6e-56 222.6 195 60.5
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 4.4e-56 221.9 196 61.7
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 4.4e-56 221.9 200 60.0
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 7.6e-56 221.1 195 60.0
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 1.7e-55 219.9 197 61.4
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 2.2e-55 219.5 196 59.2
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 2.9e-55 219.2 199 59.3
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 3.8e-55 218.8 197 60.9
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 3.8e-55 218.8 190 61.1
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 3.8e-55 218.8 190 61.1
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 1.4e-54 216.9 197 56.9
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 1.9e-54 216.5 190 60.5
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.9e-54 216.5 187 64.7
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 2.4e-54 216.1 195 59.0
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 3.2e-54 215.7 197 57.9
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 3.2e-54 215.7 200 58.0
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 3.2e-54 215.7 200 56.5
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 4.2e-54 215.3 192 57.8
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 4.2e-54 215.3 198 58.1
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 5.4e-54 214.9 195 59.5
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 5.4e-54 214.9 200 57.5
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 5.4e-54 214.9 200 56.5
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 5.4e-54 214.9 195 59.0
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 2.1e-53 213.0 187 61.0
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 2.1e-53 213.0 197 56.9
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 3.5e-53 212.2 195 58.5
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 4.6e-53 211.8 196 57.7
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 4.6e-53 211.8 190 60.0
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 6.0e-53 211.5 190 59.5
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 1.3e-52 210.3 196 55.1
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.0e-52 209.1 196 55.6
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.9e-51 206.5 186 63.4
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 1.9e-51 206.5 197 54.3
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 7.3e-51 204.5 189 54.5
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 7.3e-51 204.5 195 57.4
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 1.2e-50 203.8 189 55.6
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 1.6e-50 203.4 190 55.8
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 4.7e-50 201.8 197 55.3
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 4.7e-50 201.8 197 55.3
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 6.2e-50 201.4 197 53.8
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 2.4e-49 199.5 193 58.5
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 2.4e-49 199.5 181 59.7
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 2.4e-49 199.5 188 54.3
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 2.4e-49 199.5 189 55.6
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 4.0e-49 198.7 198 53.0
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 1.2e-48 197.2 200 52.5
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 1.5e-48 196.8 190 54.7
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 1.5e-48 196.8 190 54.7
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 2.0e-48 196.4 190 56.3
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 5.8e-48 194.9 188 53.2
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 7.6e-48 194.5 196 52.6
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 7.6e-48 194.5 189 54.0
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 7.6e-48 194.5 196 52.0
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 9.9e-48 194.1 189 54.5
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 9.9e-48 194.1 199 52.3
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 1.3e-47 193.7 190 53.7
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 1.3e-47 193.7 190 53.7
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.7e-47 193.4 181 56.4
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 2.2e-47 193.0 190 53.2
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 6.4e-47 191.4 190 52.6
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 8.4e-47 191.0 194 52.1
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 8.4e-47 191.0 190 52.6
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 1.1e-46 190.7 194 52.6
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 1.1e-46 190.7 194 52.1
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 1.1e-46 190.7 194 51.0
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 3.2e-46 189.1 198 54.5
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 5.4e-46 188.3 194 51.0
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 9.3e-46 187.6 198 53.5
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.2e-45 187.2 197 51.3
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 1.6e-45 186.8 187 52.9
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 2.1e-45 186.4 190 51.6
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 2.1e-45 186.4 194 51.5
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 3.5e-45 185.7 212 48.6
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 1.9e-43 179.9 200 50.5
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 9.6e-43 177.6 182 52.7
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 1.4e-41 173.7 126 73.0
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 4.9e-39 165.2 175 53.1
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 4.9e-39 165.2 137 65.7
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 1.1e-38 164.1 216 45.8
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.2e-37 160.6 195 49.7
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 7.9e-37 157.9 223 42.6
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 8.7e-36 154.5 131 60.3
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 8.7e-36 154.5 198 47.5
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.1e-33 147.5 156 50.0
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 4.0e-33 145.6 135 60.7
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 2.2e-31 139.8 183 43.2
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 5.5e-30 135.2 172 46.5
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.0e-23 114.4 146 43.2
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 2.2e-23 113.2 217 35.5
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 2.9e-23 112.8 122 48.4
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 8.4e-23 111.3 225 33.8
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 8.7e-20 101.3 179 37.4
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.8e-12 77.0 101 44.6
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 3.7e-10 69.3 86 46.5
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 6.3e-10 68.6 113 38.1
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 1.0e-07 61.2 54 53.7


User provided reference genes

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