Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 1.5e-25 118.6 54 100.0
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 2.3e-23 111.3 52 96.2
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 6.8e-23 109.8 52 92.3
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 1.5e-22 108.6 52 90.4
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 2.6e-22 107.8 52 92.3
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 2.6e-22 107.8 52 92.3
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 2.6e-22 107.8 52 88.5
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 4.4e-22 107.1 52 92.3
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 4.4e-22 107.1 52 90.4
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 4.4e-22 107.1 52 90.4
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 4.4e-22 107.1 52 90.4
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 4.4e-22 107.1 52 90.4
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 4.4e-22 107.1 52 90.4
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 4.4e-22 107.1 52 90.4
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 5.7e-22 106.7 52 88.5
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 5.7e-22 106.7 52 88.5
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 5.7e-22 106.7 52 88.5
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 5.7e-22 106.7 52 88.5
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 7.5e-22 106.3 52 90.4
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 9.8e-22 105.9 52 88.5
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 1.3e-21 105.5 52 88.5
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 1.3e-21 105.5 51 90.2
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 2.2e-21 104.8 52 86.5
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 2.2e-21 104.8 51 88.2
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 2.8e-21 104.4 52 88.5
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 2.8e-21 104.4 52 90.4
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 2.8e-21 104.4 52 84.6
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 3.7e-21 104.0 52 86.5
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 3.7e-21 104.0 52 86.5
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 3.7e-21 104.0 52 86.5
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 3.7e-21 104.0 52 88.5
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 4.8e-21 103.6 52 84.6
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 6.3e-21 103.2 52 84.6
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 6.3e-21 103.2 52 84.6
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 6.3e-21 103.2 52 88.5
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 8.3e-21 102.8 52 86.5
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 8.3e-21 102.8 52 84.6
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 8.3e-21 102.8 52 84.6
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 1.1e-20 102.4 50 88.0
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 1.8e-20 101.7 52 86.5
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 1.8e-20 101.7 52 86.5
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 1.8e-20 101.7 52 84.6
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 1.8e-20 101.7 52 86.5
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 2.4e-20 101.3 52 86.5
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 2.4e-20 101.3 52 82.7
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 3.1e-20 100.9 52 82.7
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 3.1e-20 100.9 52 82.7
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 3.1e-20 100.9 52 84.6
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 4.1e-20 100.5 52 82.7
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 4.1e-20 100.5 52 82.7
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 4.1e-20 100.5 52 82.7
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 4.1e-20 100.5 52 82.7
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 7.0e-20 99.8 52 84.6
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 7.0e-20 99.8 52 84.6
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 7.0e-20 99.8 52 84.6
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 9.1e-20 99.4 52 80.8
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 9.1e-20 99.4 52 84.6
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 9.1e-20 99.4 52 84.6
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 9.1e-20 99.4 52 84.6
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 9.1e-20 99.4 62 74.2
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 1.2e-19 99.0 52 84.6
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 1.2e-19 99.0 51 84.3
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 2.7e-19 97.8 52 80.8
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 2.7e-19 97.8 52 80.8
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.7e-19 97.8 52 80.8
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 2.7e-19 97.8 52 80.8
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 2.7e-19 97.8 52 80.8
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 3.5e-19 97.4 47 91.5
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 3.5e-19 97.4 52 80.8
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 3.5e-19 97.4 52 78.8
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 4.5e-19 97.1 53 81.1
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 4.5e-19 97.1 52 80.8
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 4.5e-19 97.1 52 80.8
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 5.9e-19 96.7 52 78.8
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 5.9e-19 96.7 52 78.8
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 5.9e-19 96.7 52 78.8
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 5.9e-19 96.7 52 78.8
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 5.9e-19 96.7 52 78.8
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 5.9e-19 96.7 52 78.8
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 5.9e-19 96.7 52 78.8
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 7.7e-19 96.3 52 82.7
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 7.7e-19 96.3 52 82.7
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 7.7e-19 96.3 52 82.7
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 1.0e-18 95.9 52 78.8
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 1.3e-18 95.5 52 78.8
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 1.3e-18 95.5 52 82.7
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 1.7e-18 95.1 52 78.8
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 1.7e-18 95.1 52 80.8
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 1.7e-18 95.1 53 73.6
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 1.7e-18 95.1 52 80.8
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 2.3e-18 94.7 52 78.8
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 2.3e-18 94.7 47 89.4
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 2.9e-18 94.4 51 82.4
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 2.9e-18 94.4 52 76.9
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 2.9e-18 94.4 51 78.4
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 3.8e-18 94.0 52 78.8
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 3.8e-18 94.0 51 80.4
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 5.0e-18 93.6 52 75.0
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 6.6e-18 93.2 52 76.9
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 6.6e-18 93.2 52 76.9
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 6.6e-18 93.2 52 76.9
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 6.6e-18 93.2 52 78.8
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 6.6e-18 93.2 52 78.8
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 8.6e-18 92.8 52 75.0
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 1.1e-17 92.4 52 78.8
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 1.1e-17 92.4 52 78.8
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.1e-17 92.4 52 75.0
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 2.5e-17 91.3 52 76.9
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 2.5e-17 91.3 52 76.9
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 2.5e-17 91.3 52 76.9
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 4.2e-17 90.5 52 76.9
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.2e-16 89.0 52 71.2
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 1.2e-16 89.0 51 78.4
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 1.2e-16 89.0 52 71.2
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 3.6e-16 87.4 52 75.0
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 6.1e-16 86.7 52 71.2
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 6.1e-16 86.7 52 71.2
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 1.0e-15 85.9 61 63.9
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 1.0e-15 85.9 52 69.2
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 1.0e-15 85.9 52 73.1
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 1.4e-15 85.5 52 71.2
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 1.4e-15 85.5 52 71.2
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 1.4e-15 85.5 52 71.2
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 1.4e-15 85.5 52 73.1
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 2.3e-15 84.7 52 71.2
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 5.2e-15 83.6 52 69.2
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 5.2e-15 83.6 52 69.2
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 1.2e-14 82.4 69 58.0
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 1.2e-14 82.4 52 71.2
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 1.5e-14 82.0 52 71.2
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 5.7e-14 80.1 52 69.2
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 1.3e-13 79.0 52 65.4
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 1.3e-13 79.0 50 62.0
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 2.2e-13 78.2 81 48.1
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 2.2e-13 78.2 52 65.4
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 2.8e-13 77.8 52 63.5
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 3.7e-13 77.4 84 50.0
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 6.3e-13 76.6 81 48.1
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 1.8e-12 75.1 38 81.6
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 2.4e-12 74.7 39 76.9
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 3.2e-12 74.3 37 83.8
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 2.0e-11 71.6 52 59.6
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 2.0e-11 71.6 52 69.2
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 4.5e-11 70.5 43 67.4
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 5.9e-11 70.1 52 59.6
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 1.0e-10 69.3 52 53.8
Rhsim13G0075400 Rhododendron simsii HOM05D004551 ORTHO05D005262 1.0e-10 69.3 52 65.4
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.3e-10 68.9 52 67.3
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 8.6e-10 66.2 52 53.8
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 1.5e-09 65.5 52 63.5
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 2.5e-09 64.7 34 82.4
SHI22087 Sapria himalayana HOM05D004551 ORTHO05D005262 2.5e-09 64.7 49 59.2
PRCOL_00001542 Prasinoderma coloniale HOM05D002457 ORTHO05D005262 7.3e-09 63.2 51 51.0
SGA_v2.0_scaffold75G24985 Striga asiatica HOM05D001002 ORTHO05D000802 2.1e-08 61.6 29 86.2
MD02G1278800 Malus domestica HOM05D004551 ORTHO05D005262 8.0e-08 59.7 47 63.8
Haze_27300 Corylus avellana HOM05D004551 ORTHO05D005262 1.5e-06 55.5 49 44.9
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 1.5e-06 55.5 52 53.8


User provided reference genes

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