Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 4.1e-156 554.7 281 100.0
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 6.1e-107 391.3 284 74.3
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 6.1e-107 391.3 279 73.8
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 2.3e-106 389.4 291 72.9
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 6.7e-106 387.9 240 81.7
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 2.5e-105 386.0 277 78.3
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 3.3e-105 385.6 287 70.7
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 4.3e-105 385.2 279 72.0
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 8.2e-104 380.9 240 80.4
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 2.6e-102 375.9 284 72.5
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 5.9e-102 374.8 222 86.0
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 2.2e-101 372.9 277 75.1
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 5.0e-101 371.7 281 72.2
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 5.0e-101 371.7 282 71.6
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 1.1e-100 370.5 284 71.5
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 1.1e-100 370.5 223 83.9
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 1.9e-100 369.8 218 86.2
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.9e-100 369.8 225 81.8
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 5.5e-100 368.2 231 81.0
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 3.6e-99 365.5 230 81.3
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 6.1e-99 364.8 280 71.8
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 1.4e-98 363.6 224 80.4
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 1.8e-98 363.2 271 70.8
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 5.1e-98 361.7 220 82.7
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 6.7e-98 361.3 294 67.7
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 8.8e-98 360.9 292 69.5
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 8.8e-98 360.9 292 69.5
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.1e-97 360.5 276 71.4
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 1.5e-97 360.1 260 71.5
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 2.0e-97 359.8 221 84.2
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 5.7e-97 358.2 223 81.6
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 5.7e-97 358.2 219 83.6
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 7.4e-97 357.8 206 86.4
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 9.7e-97 357.5 261 73.2
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 9.7e-97 357.5 224 79.9
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.3e-96 357.1 224 79.9
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.3e-96 357.1 224 79.5
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 1.3e-96 357.1 231 82.3
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 1.7e-96 356.7 224 80.4
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 2.2e-96 356.3 264 70.5
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 2.8e-96 355.9 270 70.4
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 4.8e-96 355.1 279 69.5
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 4.8e-96 355.1 225 79.1
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.8e-95 353.2 220 81.4
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 2.4e-95 352.8 220 80.9
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 3.1e-95 352.4 217 81.6
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 4.1e-95 352.1 217 82.9
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 4.1e-95 352.1 281 67.6
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 5.3e-95 351.7 252 72.2
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 6.9e-95 351.3 230 79.1
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 6.9e-95 351.3 220 82.3
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 9.1e-95 350.9 224 79.9
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 9.1e-95 350.9 216 82.4
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 1.2e-94 350.5 206 83.0
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 1.5e-94 350.1 222 79.7
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 1.5e-94 350.1 221 81.4
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 2.0e-94 349.7 222 80.6
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 2.0e-94 349.7 222 80.6
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 2.0e-94 349.7 220 80.5
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 2.6e-94 349.4 222 80.2
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 3.4e-94 349.0 206 84.0
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 7.7e-94 347.8 209 82.3
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 1.0e-93 347.4 222 80.2
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 1.0e-93 347.4 222 80.2
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 1.0e-93 347.4 228 78.5
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 1.3e-93 347.1 257 72.8
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 1.3e-93 347.1 281 67.3
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 2.2e-93 346.3 222 79.7
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 2.2e-93 346.3 199 85.4
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 1.1e-92 344.0 216 80.6
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.1e-92 344.0 216 80.6
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 4.2e-92 342.0 220 79.5
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 5.5e-92 341.7 222 79.7
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 7.2e-92 341.3 261 71.3
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 9.4e-92 340.9 276 68.1
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 1.6e-91 340.1 209 78.5
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.7e-91 339.3 276 67.0
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 6.7e-90 334.7 278 67.3
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 1.8e-87 326.6 294 62.2
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 4.1e-87 325.5 237 73.8
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 1.6e-86 323.6 237 70.0
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 2.0e-86 323.2 206 78.6
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.6e-86 322.8 276 65.2
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 1.0e-85 320.9 212 75.5
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 2.2e-85 319.7 183 84.7
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 2.2e-85 319.7 250 70.0
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 5.0e-85 318.5 218 75.2
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 2.3e-82 309.7 219 74.0
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 3.0e-82 309.3 170 90.6
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 2.0e-81 306.6 224 71.4
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 1.7e-80 303.5 226 69.0
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 2.8e-80 302.8 222 72.1
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 6.3e-80 301.6 318 55.7
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 3.1e-79 299.3 230 70.9
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 5.3e-79 298.5 215 70.7
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 2.2e-77 293.1 217 70.5
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 5.5e-76 288.5 206 71.4
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 2.7e-75 286.2 212 69.3
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 2.7e-75 286.2 293 59.0
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 8.8e-74 281.2 198 70.7
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 2.8e-72 276.2 267 59.9
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 2.8e-72 276.2 220 67.3
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 3.5e-70 269.2 181 77.9
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 3.6e-67 259.2 200 62.0
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 2.0e-57 226.9 259 53.3
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 4.4e-57 225.7 219 57.5
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 6.0e-54 215.3 118 87.3
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 5.8e-49 198.7 109 88.1
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 3.2e-47 193.0 171 65.5
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 2.0e-46 190.3 250 50.4
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 4.6e-46 189.1 221 48.0
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 2.5e-44 183.3 204 46.6
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 6.2e-43 178.7 228 47.8
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.2e-41 174.5 121 76.0
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 9.9e-41 171.4 97 84.5
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 6.4e-40 168.7 97 83.5
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 1.5e-36 157.5 173 56.1
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 1.1e-34 151.4 304 39.1
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 5.8e-33 145.6 88 80.7
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 1.7e-32 144.1 80 85.0
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 3.2e-31 139.8 212 45.3
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 3.9e-29 132.9 78 83.3
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 6.6e-29 132.1 77 87.0
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.6e-19 100.9 162 46.9
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 2.4e-18 97.1 79 68.4
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 9.9e-17 91.7 57 80.7
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 2.9e-16 90.1 65 69.2
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 2.4e-15 87.0 50 82.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 3.2e-15 86.7 51 80.4
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 7.9e-14 82.0 55 72.7
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 8.7e-13 78.6 48 79.2
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.5e-12 77.8 47 74.5
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 5.8e-09 65.9 47 68.1
unitig_0.g10 Utricularia gibba HOM05D006042 ORTHO05D007658 5.5e-07 59.3 111 37.8


User provided reference genes

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