Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.8e-105 386.0 196 100.0
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 9.8e-88 327.0 196 86.2
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 5.4e-62 241.5 194 67.0
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 7.1e-62 241.1 194 66.5
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.5e-61 238.8 196 66.8
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.3e-60 236.9 194 66.0
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.3e-60 236.9 197 66.0
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 2.3e-60 236.1 196 65.8
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 3.9e-60 235.3 191 65.4
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 5.1e-60 235.0 201 65.7
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 8.6e-60 234.2 192 64.6
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 8.6e-60 234.2 203 63.5
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.5e-59 233.4 195 65.6
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 2.5e-59 232.6 211 64.0
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.3e-59 232.3 197 66.0
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 7.3e-59 231.1 204 64.2
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 7.3e-59 231.1 194 67.0
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 9.5e-59 230.7 196 61.7
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 1.2e-58 230.3 190 65.3
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.6e-58 229.9 193 65.8
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-58 229.9 196 61.7
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.6e-58 229.9 201 63.7
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 2.1e-58 229.6 197 62.4
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 2.8e-58 229.2 194 63.9
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 2.8e-58 229.2 201 62.2
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 3.6e-58 228.8 206 60.2
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.1e-57 227.3 202 63.9
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.1e-57 227.3 202 63.9
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.1e-57 227.3 205 62.0
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.1e-57 227.3 209 64.1
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.1e-57 227.3 195 65.1
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.4e-57 226.9 199 63.8
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.4e-57 226.9 200 62.0
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 1.4e-57 226.9 198 62.6
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.8e-57 226.5 203 61.1
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 2.4e-57 226.1 195 63.6
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 2.4e-57 226.1 202 63.4
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 3.1e-57 225.7 198 63.6
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 6.8e-57 224.6 204 60.3
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 6.8e-57 224.6 197 60.4
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 6.8e-57 224.6 196 61.7
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 8.9e-57 224.2 202 62.9
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.2e-56 223.8 200 59.0
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 2.0e-56 223.0 207 60.4
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 2.6e-56 222.6 200 61.0
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 3.4e-56 222.2 199 60.3
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 9.9e-56 220.7 190 62.1
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 3.8e-55 218.8 193 59.1
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 4.9e-55 218.4 196 60.7
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 8.4e-55 217.6 201 62.2
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 1.1e-54 217.2 199 59.8
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-54 217.2 195 59.5
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 1.9e-54 216.5 207 58.9
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 3.2e-54 215.7 203 59.1
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 5.4e-54 214.9 177 67.2
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 7.1e-54 214.5 201 58.7
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 7.1e-54 214.5 195 61.0
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 9.2e-54 214.2 190 62.1
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.6e-53 213.4 198 60.6
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 2.1e-53 213.0 183 62.3
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 1.0e-52 210.7 177 65.5
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 3.0e-52 209.1 202 59.4
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 3.9e-52 208.8 204 57.8
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-51 207.2 181 59.7
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.1e-51 207.2 202 55.0
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 2.5e-51 206.1 198 57.6
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 5.6e-51 204.9 207 56.5
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 5.6e-51 204.9 207 57.0
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 2.8e-50 202.6 152 70.4
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 2.8e-50 202.6 190 55.3
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 6.2e-50 201.4 190 57.9
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.1e-49 200.7 203 54.2
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.8e-49 199.9 188 56.4
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 2.4e-49 199.5 206 53.4
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 5.3e-49 198.4 202 52.5
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 5.3e-49 198.4 204 55.9
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.2e-48 197.2 201 51.7
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.2e-48 197.2 201 51.7
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.2e-48 197.2 201 51.7
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.2e-48 197.2 201 51.7
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.5e-48 196.8 177 56.5
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 2.6e-48 196.1 201 51.2
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 4.4e-48 195.3 197 54.8
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 5.8e-48 194.9 193 51.3
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 7.6e-48 194.5 202 51.5
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.3e-47 193.7 206 55.3
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 8.4e-47 191.0 206 51.5
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.1e-46 190.7 197 51.8
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.4e-46 190.3 209 54.1
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.4e-46 189.5 209 51.7
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 3.2e-46 189.1 204 49.5
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 9.3e-46 187.6 208 50.5
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.6e-45 186.8 190 54.2
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 1.6e-45 186.8 204 50.0
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 2.7e-45 186.0 149 64.4
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 4.6e-45 185.3 204 50.0
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.3e-44 183.7 190 53.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.3e-44 183.0 142 67.6
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 7.3e-43 177.9 180 50.0
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 2.6e-40 169.5 156 51.9
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 3.5e-37 159.1 167 49.1
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 5.8e-32 141.7 151 47.7
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 2.9e-31 139.4 176 48.3
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 9.0e-25 117.9 90 57.8
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.0e-24 116.7 121 49.6
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 2.1e-21 106.7 159 38.4
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 4.8e-18 95.5 152 38.2
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 4.1e-17 92.4 142 35.2
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 5.9e-16 88.6 119 50.4
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.0e-15 87.8 119 47.9
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.8e-15 85.9 149 34.2
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 1.1e-14 84.3 106 49.1
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.2e-13 80.9 142 32.4
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 3.0e-12 76.3 139 32.4
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.0e-12 76.3 138 33.3
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 8.8e-12 74.7 96 44.8


User provided reference genes

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