Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030530.1 Olea europaea HOM05D001476 ORTHO05D002681 1.8e-37 158.7 75 100.0
MSTRG.10232 Avicennia marina HOM05D001476 ORTHO05D002681 1.6e-09 65.9 41 70.7
MSTRG.26797 Avicennia marina HOM05D001476 ORTHO05D002681 1.6e-09 65.9 41 73.2
vmacro20234 Vaccinium macrocarpon HOM05D001476 ORTHO05D002681 1.6e-09 65.9 37 75.7
Lj2C79T8 Lonicera japonica HOM05D001476 ORTHO05D002681 2.0e-09 65.5 50 64.0
Dinv37085 Davidia involucrata HOM05D001476 ORTHO05D002681 4.5e-09 64.3 37 73.0
Thecc.05G022600 Theobroma cacao HOM05D001476 ORTHO05D002681 4.5e-09 64.3 55 61.8
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 1.0e-08 63.2 42 64.3
FvH4_6g12120 Fragaria vesca HOM05D001476 ORTHO05D002681 1.0e-08 63.2 38 76.3
FAN02G4390 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.0e-08 63.2 38 76.3
FAN05G3413 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.0e-08 63.2 38 76.3
FAN14G1371 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.0e-08 63.2 38 76.3
FAN14G2417 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.0e-08 63.2 38 76.3
RcHm_v2.0_Chr3g0463921 Rosa chinensis HOM05D001476 ORTHO05D002681 1.0e-08 63.2 38 76.3
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 1.3e-08 62.8 37 73.0
FAN09G3177 Fragaria x ananassa HOM05D001476 ORTHO05D002681 1.3e-08 62.8 38 73.7
Actinidia01112 Actinidia chinensis HOM05D001476 ORTHO05D002681 1.7e-08 62.4 37 70.3
unitig_88.g27656 Utricularia gibba HOM05D001476 ORTHO05D002681 1.7e-08 62.4 62 45.2
Actinidia05347 Actinidia chinensis HOM05D001476 ORTHO05D002681 2.2e-08 62.0 37 67.6
Lalb_Chr13g0291281 Lupinus albus HOM05D001476 ORTHO05D002681 2.2e-08 62.0 37 70.3
Nitab4.5_0010311g0010 Nicotiana tabacum HOM05D001476 ORTHO05D002681 2.2e-08 62.0 60 50.0
Glyma.01G111200 Glycine max HOM05D001476 ORTHO05D002681 3.8e-08 61.2 37 70.3
Glyma.03G076800 Glycine max HOM05D001476 ORTHO05D002681 3.8e-08 61.2 37 70.3
Lj3g0015459 Lotus japonicus HOM05D001476 ORTHO05D002681 3.8e-08 61.2 37 70.3
Prupe.6G270400 Prunus persica HOM05D001476 ORTHO05D002681 3.8e-08 61.2 43 72.1
Actinidia13781 Actinidia chinensis HOM05D001476 ORTHO05D002681 5.0e-08 60.8 37 67.6
Migut.L01992 Erythranthe guttata HOM05D001476 ORTHO05D002681 5.0e-08 60.8 37 70.3
Hma1.2p1_0763F.1_g214600 Hydrangea macrophylla HOM05D001476 ORTHO05D002681 5.0e-08 60.8 37 70.3
MD04G1146600 Malus domestica HOM05D001476 ORTHO05D002681 5.0e-08 60.8 47 63.8
Rhsim04G0165500 Rhododendron simsii HOM05D001476 ORTHO05D002681 5.0e-08 60.8 37 67.6
VMungo0331G0719 Vigna mungo HOM05D001476 ORTHO05D002681 5.0e-08 60.8 42 69.0
CSS0039086 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D002681 6.5e-08 60.5 37 67.6
DCAR_028830 Daucus carota HOM05D001476 ORTHO05D002681 6.5e-08 60.5 50 62.0
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 6.5e-08 60.5 37 70.3
Phvul.010G008200 Phaseolus vulgaris HOM05D001476 ORTHO05D002681 6.5e-08 60.5 37 70.3
Lsat_1_v5_gn_8_99901 Lactuca sativa HOM05D001476 ORTHO05D006149 8.5e-08 60.1 44 61.4
TAR402G0008 Trochodendron aralioides HOM05D001476 ORTHO05D002681 8.5e-08 60.1 37 70.3
TAR636G2843 Trochodendron aralioides HOM05D001476 ORTHO05D002681 8.5e-08 60.1 43 65.1
CSS0010109 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D002681 1.1e-07 59.7 37 64.9
MD12G1159800 Malus domestica HOM05D001476 ORTHO05D002681 1.1e-07 59.7 47 61.7
Nn2g11353 Nelumbo nucifera HOM05D001476 ORTHO05D002681 1.1e-07 59.7 41 73.2
COL.COLO4_14610 Corchorus olitorius HOM05D001476 ORTHO05D002681 1.5e-07 59.3 41 65.9
Haze_20945 Corylus avellana HOM05D001476 ORTHO05D002681 1.5e-07 59.3 37 67.6
DCAR_024039 Daucus carota HOM05D001476 ORTHO05D002681 1.5e-07 59.3 51 58.8
Glyma.18G196200 Glycine max HOM05D001476 ORTHO05D002681 1.5e-07 59.3 37 64.9
Lj3A957G34 Lonicera japonica HOM05D001476 ORTHO05D002681 1.5e-07 59.3 43 62.8
Medtr4g014920 Medicago truncatula HOM05D001476 ORTHO05D002681 1.5e-07 59.3 37 67.6
CANSAT35G1723 Cannabis sativa HOM05D001476 ORTHO05D002681 1.9e-07 58.9 39 66.7
Cc06_g01700 Coffea canephora HOM05D001476 ORTHO05D002681 1.9e-07 58.9 43 67.4
GSVIVG01034015001 Vitis vinifera HOM05D001476 ORTHO05D002681 1.9e-07 58.9 38 65.8
CAN.G686.2 Capsicum annuum HOM05D001476 ORTHO05D002681 2.5e-07 58.5 47 57.4
Duzib093G1022 Durio zibethinus HOM05D001476 ORTHO05D002681 2.5e-07 58.5 41 63.4
Psat0s2261g0280 Pisum sativum HOM05D001476 ORTHO05D002681 2.5e-07 58.5 37 64.9
Sabra06G0073800 Salix brachista HOM05D001476 ORTHO05D002681 2.5e-07 58.5 38 63.2
vmacro08605 Vaccinium macrocarpon HOM05D001476 ORTHO05D002681 2.5e-07 58.5 37 64.9
arahy.Tifrunner.gnm1.ann1.D26UBJ Arachis hypogaea HOM05D001476 ORTHO05D002681 3.2e-07 58.2 38 63.2
arahy.Tifrunner.gnm1.ann1.GAA15C Arachis hypogaea HOM05D001476 ORTHO05D002681 3.2e-07 58.2 38 63.2
Gohir.A01G225100 Gossypium hirsutum HOM05D001476 ORTHO05D002681 3.2e-07 58.2 41 61.0
Gohir.D01G214700 Gossypium hirsutum HOM05D001476 ORTHO05D002681 3.2e-07 58.2 41 61.0
Gohir.D11G347600 Gossypium hirsutum HOM05D001476 ORTHO05D002681 3.2e-07 58.2 37 67.6
Gorai.002G260900 Gossypium raimondii HOM05D001476 ORTHO05D002681 3.2e-07 58.2 41 61.0
Gorai.007G378000 Gossypium raimondii HOM05D001476 ORTHO05D002681 3.2e-07 58.2 37 67.6
Rhsim05G0205600 Rhododendron simsii HOM05D001476 ORTHO05D002681 3.2e-07 58.2 38 68.4
CiPaw.10G154200 Carya illinoinensis HOM05D001476 ORTHO05D002681 4.2e-07 57.8 38 63.2
HanXRQChr04g0102031 Helianthus annuus HOM05D001476 ORTHO05D002681 4.2e-07 57.8 35 71.4
Lalb_Chr07g0193341 Lupinus albus HOM05D001476 ORTHO05D002681 4.2e-07 57.8 37 70.3
Manes.09G101800 Manihot esculenta HOM05D001476 ORTHO05D002681 4.2e-07 57.8 38 60.5
Cpa.g.sc56.109 Carica papaya HOM05D001476 ORTHO05D002681 5.5e-07 57.4 37 64.9
Ca_23814_v3 Cicer arietinum L. HOM05D001476 ORTHO05D002681 5.5e-07 57.4 37 64.9
Sabra16G0107300 Salix brachista HOM05D001476 ORTHO05D002681 5.5e-07 57.4 43 58.1
unitig_0.g1458 Utricularia gibba HOM05D001476 ORTHO05D002681 5.5e-07 57.4 39 59.0
Lj1g0008316 Lotus japonicus HOM05D001476 ORTHO05D002681 7.2e-07 57.0 37 59.5
Nitab4.5_0000008g0710 Nicotiana tabacum HOM05D001476 ORTHO05D002681 7.2e-07 57.0 40 62.5
Peaxi162Scf00141g00135 Petunia axillaris HOM05D001476 ORTHO05D002681 7.2e-07 57.0 47 55.3
Manes.08G087300 Manihot esculenta HOM05D001476 ORTHO05D002681 9.4e-07 56.6 37 62.2
Nitab4.5_0000189g0270 Nicotiana tabacum HOM05D001476 ORTHO05D002681 9.4e-07 56.6 37 59.5
PSO063G0778 Papaver somniferum HOM05D001476 ORTHO05D002681 9.4e-07 56.6 49 55.1
PSO782G1521 Papaver somniferum HOM05D001476 ORTHO05D002681 9.4e-07 56.6 49 55.1
Potri.006G096000 Populus trichocarpa HOM05D001476 ORTHO05D002681 9.4e-07 56.6 38 63.2
QL07p036052 Quercus lobata HOM05D001476 ORTHO05D002681 9.4e-07 56.6 42 57.1
Gohir.A04G088150 Gossypium hirsutum HOM05D001476 ORTHO05D002681 1.2e-06 56.2 37 64.9
Gohir.D04G128500 Gossypium hirsutum HOM05D001476 ORTHO05D002681 1.2e-06 56.2 37 64.9
Gorai.012G111600 Gossypium raimondii HOM05D001476 ORTHO05D002681 1.2e-06 56.2 37 64.9
Gohir.A11G328600 Gossypium hirsutum HOM05D001476 ORTHO05D002681 1.6e-06 55.8 36 66.7
Medtr7g066810 Medicago truncatula HOM05D001476 ORTHO05D002681 1.6e-06 55.8 37 62.2
Peaxi162Scf00212g00617 Petunia axillaris HOM05D001476 ORTHO05D002681 1.6e-06 55.8 44 61.4
Solyc09g011930.3 Solanum lycopersicum HOM05D001476 ORTHO05D002681 1.6e-06 55.8 48 56.2
Solyc11g040180.3 Solanum lycopersicum HOM05D001476 ORTHO05D002681 1.6e-06 55.8 48 56.2
Sopen09g006740 Solanum pennellii HOM05D001476 ORTHO05D002681 1.6e-06 55.8 48 56.2
Sopen11g017920 Solanum pennellii HOM05D001476 ORTHO05D002681 1.6e-06 55.8 48 56.2
TWI74G0101 Tripterygium wilfordii HOM05D001476 ORTHO05D002681 1.6e-06 55.8 37 67.6
HanXRQChr16g0507831 Helianthus annuus HOM05D001476 ORTHO05D002681 2.1e-06 55.5 33 72.7
CiPaw.09G205600 Carya illinoinensis HOM05D001476 ORTHO05D002681 2.7e-06 55.1 38 57.9
Ca_23720_v3 Cicer arietinum L. HOM05D001476 ORTHO05D002681 2.7e-06 55.1 37 59.5
Nitab4.5_0003670g0030 Nicotiana tabacum HOM05D001476 ORTHO05D002681 2.7e-06 55.1 37 59.5
Hund28010 Selenicereus undatus HOM05D001476 ORTHO05D002681 2.7e-06 55.1 45 57.8
Hund28012 Selenicereus undatus HOM05D001476 ORTHO05D002681 2.7e-06 55.1 45 57.8
SGA_v2.0_scaffold240G44115 Striga asiatica HOM05D001476 ORTHO05D002681 2.7e-06 55.1 45 60.0
TPR.G5239 Trifolium pratense HOM05D001476 ORTHO05D002681 2.7e-06 55.1 37 62.2
MBI16_g28724_MAGBIO Magnolia biondii HOM05D001476 ORTHO05D002681 3.6e-06 54.7 39 59.0
Aqoxy4G03020 Aquilegia oxysepala HOM05D001476 ORTHO05D002681 4.7e-06 54.3 30 73.3
FvH4_3g12521 Fragaria vesca HOM05D001476 ORTHO05D002681 4.7e-06 54.3 50 52.0
FAN16G1516 Fragaria x ananassa HOM05D001476 ORTHO05D002681 4.7e-06 54.3 50 52.0
Glyma.07G144500 Glycine max HOM05D001476 ORTHO05D002681 4.7e-06 54.3 37 59.5
Psat0s1978g0080 Pisum sativum HOM05D001476 ORTHO05D002681 4.7e-06 54.3 38 57.9
SGA_v2.0_scaffold106G30525 Striga asiatica HOM05D001476 ORTHO05D002681 4.7e-06 54.3 34 70.6
TPR.G1560 Trifolium pratense HOM05D001476 ORTHO05D002681 4.7e-06 54.3 37 62.2
TWI53G0872 Tripterygium wilfordii HOM05D001476 ORTHO05D002681 4.7e-06 54.3 37 64.9
Potri.016G110700 Populus trichocarpa HOM05D001476 ORTHO05D002681 6.1e-06 53.9 37 62.2
Thecc.09G202400 Theobroma cacao HOM05D001476 ORTHO05D002681 6.1e-06 53.9 36 63.9
Atru.chr3.1613 Acer truncatum HOM05D001476 ORTHO05D002681 8.0e-06 53.5 36 63.9
Atru.chr6.2288 Acer truncatum HOM05D001476 ORTHO05D002681 8.0e-06 53.5 36 63.9
THA.LOC104823280 Tarenaya hassleriana HOM05D001476 ORTHO05D002681 8.0e-06 53.5 42 54.8


User provided reference genes

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