Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030452.1 Olea europaea HOM05D000295 ORTHO05D028557 1.6e-39 165.6 84 100.0
SGA_v2.0_scaffold85G26639 Striga asiatica HOM05D000295 ORTHO05D000188 9.5e-16 86.7 55 76.4
CSS0040122 Camellia sinensis var. sinensis HOM05D000295 ORTHO05D000188 1.1e-14 83.2 51 78.4
Dinv04839 Davidia involucrata HOM05D000295 ORTHO05D000188 4.0e-14 81.3 77 53.2
Dinv12272 Davidia involucrata HOM05D000295 ORTHO05D000188 4.0e-14 81.3 77 53.2
Eucgr.A00714 Eucalyptus grandis HOM05D000295 ORTHO05D000188 1.2e-13 79.7 53 69.8
MSTRG.18950 Avicennia marina HOM05D000295 ORTHO05D000188 1.5e-13 79.3 50 78.0
Dinv28723 Davidia involucrata HOM05D000295 ORTHO05D000188 1.5e-13 79.3 71 52.1
vmacro20361 Vaccinium macrocarpon HOM05D000295 ORTHO05D000188 1.5e-13 79.3 71 60.6
TAR633G0227 Trochodendron aralioides HOM05D000295 ORTHO05D000188 2.0e-13 79.0 74 54.1
vmacro02886 Vaccinium macrocarpon HOM05D000295 ORTHO05D000188 2.0e-13 79.0 80 51.2
Actinidia29042 Actinidia chinensis HOM05D000295 ORTHO05D000188 4.4e-13 77.8 51 72.5
DCAR_015344 Daucus carota HOM05D000295 ORTHO05D000188 4.4e-13 77.8 58 65.5
Nn5g26874 Nelumbo nucifera HOM05D000295 ORTHO05D000188 4.4e-13 77.8 55 63.6
Actinidia11517 Actinidia chinensis HOM05D000295 ORTHO05D000188 5.8e-13 77.4 51 72.5
Lj6g0005147 Lotus japonicus HOM05D000295 ORTHO05D000188 9.9e-13 76.6 79 54.4
PGSC0003DMG400030463 Solanum tuberosum HOM05D000295 ORTHO05D000188 1.3e-12 76.3 73 54.8
Nitab4.5_0002759g0090 Nicotiana tabacum HOM05D000295 ORTHO05D000188 1.7e-12 75.9 51 70.6
Peaxi162Scf00390g00326 Petunia axillaris HOM05D000295 ORTHO05D000188 2.2e-12 75.5 74 56.8
CAN.G404.2 Capsicum annuum HOM05D000295 ORTHO05D000188 2.9e-12 75.1 73 52.1
Hma1.2p1_0119F.1_g056890 Hydrangea macrophylla HOM05D000295 ORTHO05D000188 2.9e-12 75.1 72 51.4
Sopen09g010830 Solanum pennellii HOM05D000295 ORTHO05D000188 2.9e-12 75.1 65 56.9
PGSC0003DMG400004415 Solanum tuberosum HOM05D000295 ORTHO05D000188 2.9e-12 75.1 65 56.9
Solyc06g082470.3 Solanum lycopersicum HOM05D000295 ORTHO05D000188 3.8e-12 74.7 73 53.4
Solyc09g018170.4 Solanum lycopersicum HOM05D000295 ORTHO05D000188 3.8e-12 74.7 65 56.9
Sopen06g033850 Solanum pennellii HOM05D000295 ORTHO05D000188 3.8e-12 74.7 73 53.4
Atru.chr8.2383 Acer truncatum HOM05D000295 ORTHO05D000188 4.9e-12 74.3 52 63.5
Duzib212G0128 Durio zibethinus HOM05D000295 ORTHO05D000188 4.9e-12 74.3 51 66.7
Actinidia23174 Actinidia chinensis HOM05D000295 ORTHO05D000188 6.4e-12 73.9 63 54.0
Gohir.A13G235500 Gossypium hirsutum HOM05D000295 ORTHO05D000188 6.4e-12 73.9 81 50.6
Nitab4.5_0002091g0040 Nicotiana tabacum HOM05D000295 ORTHO05D000188 6.4e-12 73.9 51 68.6
Gorai.013G272100 Gossypium raimondii HOM05D000295 ORTHO05D000188 8.4e-12 73.6 86 48.8
Potri.016G134600 Populus trichocarpa HOM05D000295 ORTHO05D000188 8.4e-12 73.6 51 66.7
VMungo0647G1717 Vigna mungo HOM05D000295 ORTHO05D000188 8.4e-12 73.6 53 64.2
Aqoxy2G00717 Aquilegia oxysepala HOM05D000295 ORTHO05D000188 1.1e-11 73.2 54 70.4
Lj2A1100G24 Lonicera japonica HOM05D000295 ORTHO05D000188 1.1e-11 73.2 69 55.1
Cfa017055 Carpinus fangiana HOM05D000295 ORTHO05D000188 1.4e-11 72.8 72 45.8
Ca_15034_v3 Cicer arietinum L. HOM05D000295 ORTHO05D000188 1.4e-11 72.8 81 54.3
Gohir.D13G241200 Gossypium hirsutum HOM05D000295 ORTHO05D000188 1.4e-11 72.8 81 50.6
Nitab4.5_0000330g0050 Nicotiana tabacum HOM05D000295 ORTHO05D000188 1.4e-11 72.8 44 77.3
SalBow5G1750 Salvia bowleyana HOM05D000295 ORTHO05D000188 1.4e-11 72.8 53 64.2
SalBow5G3679 Salvia bowleyana HOM05D000295 ORTHO05D000188 1.4e-11 72.8 53 64.2
CSS0020559 Camellia sinensis var. sinensis HOM05D000295 ORTHO05D000188 2.4e-11 72.0 87 46.0
Haze_21158 Corylus avellana HOM05D000295 ORTHO05D000188 2.4e-11 72.0 70 48.6
Glyma.02G235700 Glycine max HOM05D000295 ORTHO05D000188 2.4e-11 72.0 77 49.4
Glyma.18G054100 Glycine max HOM05D000295 ORTHO05D000188 2.4e-11 72.0 81 49.4
Gohir.D10G117000 Gossypium hirsutum HOM05D000295 ORTHO05D000188 2.4e-11 72.0 52 63.5
Gorai.011G128900 Gossypium raimondii HOM05D000295 ORTHO05D000188 2.4e-11 72.0 52 63.5
Sabra04G0152000 Salix brachista HOM05D000295 ORTHO05D000188 2.4e-11 72.0 52 67.3
Migut.N00734 Erythranthe guttata HOM05D000295 ORTHO05D000188 3.2e-11 71.6 76 51.3
CANSAT35G0830 Cannabis sativa HOM05D000295 ORTHO05D000188 4.1e-11 71.2 54 66.7
Cpa.g.sc2.315 Carica papaya HOM05D000295 ORTHO05D028557 4.1e-11 71.2 73 50.7
Haze_24455 Corylus avellana HOM05D000295 ORTHO05D000188 4.1e-11 71.2 53 62.3
Glyma.14G203700 Glycine max HOM05D000295 ORTHO05D000188 4.1e-11 71.2 77 48.1
Lj3A942G81 Lonicera japonica HOM05D000295 ORTHO05D000188 4.1e-11 71.2 52 65.4
Medtr6g016260 Medicago truncatula HOM05D000295 ORTHO05D000188 4.1e-11 71.2 81 48.1
Rhsim13G0060600 Rhododendron simsii HOM05D000295 ORTHO05D000188 4.1e-11 71.2 80 48.8
Atru.chr1.2515 Acer truncatum HOM05D000295 ORTHO05D000188 5.4e-11 70.9 72 52.8
Actinidia11616 Actinidia chinensis HOM05D000295 ORTHO05D000188 5.4e-11 70.9 69 49.3
Ciclev10011307m.g Citrus clementina HOM05D000295 ORTHO05D000188 5.4e-11 70.9 72 50.0
COL.COLO4_11198 Corchorus olitorius HOM05D000295 ORTHO05D000188 5.4e-11 70.9 67 55.2
Gohir.A10G149800 Gossypium hirsutum HOM05D000295 ORTHO05D000188 5.4e-11 70.9 52 63.5
Cpa.g.sc86.36 Carica papaya HOM05D000295 ORTHO05D000188 7.1e-11 70.5 51 66.7
GSVIVG01024578001 Vitis vinifera HOM05D000295 ORTHO05D000188 7.1e-11 70.5 78 50.0
EL10Ac7g15854 Beta vulgaris HOM05D000295 ORTHO05D000188 9.2e-11 70.1 52 57.7
Cc06_g00490 Coffea canephora HOM05D000295 ORTHO05D000188 9.2e-11 70.1 57 63.2
Manes.09G116600 Manihot esculenta HOM05D000295 ORTHO05D000188 9.2e-11 70.1 51 66.7
Manes.18G139300 Manihot esculenta HOM05D000295 ORTHO05D000188 9.2e-11 70.1 76 47.4
Nitab4.5_0003003g0030 Nicotiana tabacum HOM05D000295 ORTHO05D000188 9.2e-11 70.1 44 72.7
VMungo0540G0983 Vigna mungo HOM05D000295 ORTHO05D000188 9.2e-11 70.1 81 49.4
CiPaw.14G051500 Carya illinoinensis HOM05D000295 ORTHO05D000188 1.2e-10 69.7 53 62.3
Ciclev10000645m.g Citrus clementina HOM05D000295 ORTHO05D000188 1.2e-10 69.7 76 50.0
MBI03_g38524_MAGBIO Magnolia biondii HOM05D000295 ORTHO05D000188 1.2e-10 69.7 50 62.0
Phvul.008G248200 Phaseolus vulgaris HOM05D000295 ORTHO05D000188 1.2e-10 69.7 53 60.4
Lalb_Chr18g0054301 Lupinus albus HOM05D000295 ORTHO05D000188 1.6e-10 69.3 53 60.4
Rhsim05G0229600 Rhododendron simsii HOM05D000295 ORTHO05D000188 1.6e-10 69.3 77 50.6
SGA_v2.0_scaffold120G32983 Striga asiatica HOM05D000295 ORTHO05D000188 1.6e-10 69.3 56 58.9
GSVIVG01030202001 Vitis vinifera HOM05D000295 ORTHO05D000188 1.6e-10 69.3 52 59.6
CiPaw.09G219600 Carya illinoinensis HOM05D000295 ORTHO05D000188 2.1e-10 68.9 45 68.9
COL.COLO4_16551 Corchorus olitorius HOM05D000295 ORTHO05D000188 2.1e-10 68.9 60 55.0
Oeu011374.1 Olea europaea HOM05D000295 ORTHO05D000188 2.1e-10 68.9 79 51.9
Prupe.6G042600 Prunus persica HOM05D000295 ORTHO05D000188 2.1e-10 68.9 54 57.4
TWI53G0363 Tripterygium wilfordii HOM05D000295 ORTHO05D000188 2.1e-10 68.9 57 52.6
SalBow2G2752 Salvia bowleyana HOM05D000295 ORTHO05D000188 2.7e-10 68.6 52 61.5
TWI74G1346 Tripterygium wilfordii HOM05D000295 ORTHO05D000188 2.7e-10 68.6 68 50.0
unitig_26.g8961 Utricularia gibba HOM05D000295 ORTHO05D028557 2.7e-10 68.6 47 68.1
Lalb_Chr04g0251781 Lupinus albus HOM05D000295 ORTHO05D000188 3.5e-10 68.2 76 47.4
Prupe.6G291500 Prunus persica HOM05D000295 ORTHO05D000188 3.5e-10 68.2 45 68.9
RcHm_v2.0_Chr5g0072661 Rosa chinensis HOM05D000295 ORTHO05D000188 3.5e-10 68.2 70 47.1
MELO3C026875.2 Cucumis melo HOM05D000295 ORTHO05D000188 4.6e-10 67.8 49 63.3
CsaV3_6G019100 Cucumis sativus L. HOM05D000295 ORTHO05D000188 4.6e-10 67.8 49 63.3
FvH4_3g40320 Fragaria vesca HOM05D000295 ORTHO05D000188 4.6e-10 67.8 70 47.1
FAN11G0600 Fragaria x ananassa HOM05D000295 ORTHO05D000188 4.6e-10 67.8 70 47.1
FAN16G2232 Fragaria x ananassa HOM05D000295 ORTHO05D000188 4.6e-10 67.8 70 47.1
Nn2g10336 Nelumbo nucifera HOM05D000295 ORTHO05D000188 4.6e-10 67.8 48 62.5
Peaxi162Scf00732g00042 Petunia axillaris HOM05D000295 ORTHO05D000188 4.6e-10 67.8 61 60.7
QL01p025069 Quercus lobata HOM05D000295 ORTHO05D000188 4.6e-10 67.8 47 66.0
Sed0009548 Sechium edule HOM05D000295 ORTHO05D000188 4.6e-10 67.8 49 63.3
arahy.Tifrunner.gnm1.ann1.8VCQ03 Arachis hypogaea HOM05D000295 ORTHO05D000188 6.0e-10 67.4 53 58.5
arahy.Tifrunner.gnm1.ann1.L9Z1TX Arachis hypogaea HOM05D000295 ORTHO05D000188 6.0e-10 67.4 53 58.5
ClCG02G019090 Citrullus lanatus HOM05D000295 ORTHO05D000188 6.0e-10 67.4 61 54.1
Migut.J00056 Erythranthe guttata HOM05D000295 ORTHO05D000188 6.0e-10 67.4 60 58.3
FAN25G0031 Fragaria x ananassa HOM05D000295 ORTHO05D000188 6.0e-10 67.4 75 45.3
Lalb_Chr10g0103761 Lupinus albus HOM05D000295 ORTHO05D000188 6.0e-10 67.4 78 46.2
Sabra19G0126200 Salix brachista HOM05D000295 ORTHO05D000188 6.0e-10 67.4 68 50.0
FAN21G0846 Fragaria x ananassa HOM05D000295 ORTHO05D000188 7.8e-10 67.0 75 45.3
Manes.08G173900 Manihot esculenta HOM05D000295 ORTHO05D000188 7.8e-10 67.0 50 60.0
Ca_05702_v3 Cicer arietinum L. HOM05D000295 ORTHO05D000188 1.0e-09 66.6 75 50.7
Ca_30028_v3 Cicer arietinum L. HOM05D000295 ORTHO05D000188 1.0e-09 66.6 75 50.7
Hma1.2p1_1052F.1_g252310 Hydrangea macrophylla HOM05D000295 ORTHO05D000188 1.0e-09 66.6 51 62.7
TPR.G25736 Trifolium pratense HOM05D000295 ORTHO05D000188 1.0e-09 66.6 51 60.8
Phvul.006G077100 Phaseolus vulgaris HOM05D000295 ORTHO05D000188 1.3e-09 66.2 80 50.0
QL07p032552 Quercus lobata HOM05D000295 ORTHO05D000188 1.3e-09 66.2 49 63.3
THA.LOC104810687 Tarenaya hassleriana HOM05D000295 ORTHO05D000188 1.3e-09 66.2 81 43.2
Potri.013G155100 Populus trichocarpa HOM05D000295 ORTHO05D000188 1.7e-09 65.9 72 48.6
TWI75G1471 Tripterygium wilfordii HOM05D000295 ORTHO05D000188 1.7e-09 65.9 53 56.6
arahy.Tifrunner.gnm1.ann1.Z1GLJH Arachis hypogaea HOM05D000295 ORTHO05D000188 2.3e-09 65.5 71 47.9
MD03G1053500 Malus domestica HOM05D000295 ORTHO05D000188 2.3e-09 65.5 54 55.6
Cc01_g15230 Coffea canephora HOM05D000295 ORTHO05D000188 3.0e-09 65.1 76 51.3
FAN02G2806 Fragaria x ananassa HOM05D000295 ORTHO05D000188 3.0e-09 65.1 53 56.6
CANSAT54G1796 Cannabis sativa HOM05D000295 ORTHO05D000188 3.9e-09 64.7 78 46.2
CiPaw.13G064900 Carya illinoinensis HOM05D000295 ORTHO05D000188 3.9e-09 64.7 59 55.9
PGR031G1539 Punica granatum HOM05D000295 ORTHO05D000188 3.9e-09 64.7 53 60.4
MD11G1055100 Malus domestica HOM05D000295 ORTHO05D000188 5.1e-09 64.3 54 55.6
Prupe.4G073500 Prunus persica HOM05D000295 ORTHO05D000188 5.1e-09 64.3 41 73.2
Duzib151G0882 Durio zibethinus HOM05D000295 ORTHO05D000188 6.6e-09 63.9 71 46.5
FAN05G3058 Fragaria x ananassa HOM05D000295 ORTHO05D000188 6.6e-09 63.9 51 58.8
Sabra13G0124900 Salix brachista HOM05D000295 ORTHO05D000188 6.6e-09 63.9 72 47.2
Lsat_1_v5_gn_5_150120 Lactuca sativa HOM05D000295 ORTHO05D028557 8.7e-09 63.5 45 62.2
Potri.019G128600 Populus trichocarpa HOM05D000295 ORTHO05D000188 8.7e-09 63.5 72 48.6
Zm00001eb195270 Zea mays HOM05D000295 ORTHO05D000188 8.7e-09 63.5 44 63.6
AUR62009730 Chenopodium quinoa HOM05D000295 ORTHO05D000188 1.1e-08 63.2 56 53.6
TAR636G2144 Trochodendron aralioides HOM05D006353 ORTHO05D007993 1.1e-08 63.2 44 65.9
Ah.08g215480 Amaranthus hybridus HOM05D000295 ORTHO05D000188 1.5e-08 62.8 76 42.1
MD04G1172700 Malus domestica HOM05D000295 ORTHO05D000188 1.5e-08 62.8 45 57.8
PSO339G1511 Papaver somniferum HOM05D000295 ORTHO05D000188 1.5e-08 62.8 50 52.0
PSO384G3878 Papaver somniferum HOM05D000295 ORTHO05D000188 1.5e-08 62.8 50 52.0
MSTRG.5511 Avicennia marina HOM05D000295 ORTHO05D000188 1.9e-08 62.4 48 62.5
AUR62036215 Chenopodium quinoa HOM05D000295 ORTHO05D000188 1.9e-08 62.4 54 53.7
FAN05G2020 Fragaria x ananassa HOM05D000295 ORTHO05D000188 1.9e-08 62.4 51 56.9
Glyma.11G159900 Glycine max HOM05D000295 ORTHO05D000188 1.9e-08 62.4 65 50.8
Thecc.04G154000 Theobroma cacao HOM05D000295 ORTHO05D000188 1.9e-08 62.4 64 45.3
FvH4_6g10120 Fragaria vesca HOM05D000295 ORTHO05D000188 2.5e-08 62.0 61 52.5
FAN14G0876 Fragaria x ananassa HOM05D000295 ORTHO05D000188 2.5e-08 62.0 61 52.5
Lsat_1_v5_gn_5_174801 Lactuca sativa HOM05D000295 ORTHO05D000188 2.5e-08 62.0 48 58.3
HanXRQChr01g0012621 Helianthus annuus HOM05D000295 ORTHO05D000188 3.3e-08 61.6 44 61.4
VMungo0331G1922 Vigna mungo HOM05D000295 ORTHO05D000188 3.3e-08 61.6 46 56.5
ECA248G0716 Erigeron canadensis HOM05D000295 ORTHO05D000188 4.3e-08 61.2 67 49.3
RcHm_v2.0_Chr3g0460821 Rosa chinensis HOM05D000295 ORTHO05D000188 4.3e-08 61.2 49 59.2
Os12g0114100 Oryza sativa ssp. japonica HOM05D000295 ORTHO05D000188 7.3e-08 60.5 46 58.7
ECA248G1534 Erigeron canadensis HOM05D000295 ORTHO05D000188 9.6e-08 60.1 47 59.6
Glyma.01G132000 Glycine max HOM05D000295 ORTHO05D000188 9.6e-08 60.1 45 57.8
Os11g0114600 Oryza sativa ssp. japonica HOM05D000295 ORTHO05D000188 9.6e-08 60.1 43 62.8
HanXRQChr01g0000201 Helianthus annuus HOM05D000295 ORTHO05D000188 1.2e-07 59.7 71 47.9
AUR62029703 Chenopodium quinoa HOM05D000295 ORTHO05D000188 2.1e-07 58.9 52 53.8
CsaV3_4G027100 Cucumis sativus L. HOM05D000295 ORTHO05D000188 2.1e-07 58.9 67 44.8
Eucgr.J01843 Eucalyptus grandis HOM05D000295 ORTHO05D000188 2.1e-07 58.9 48 56.2
Lj1C121T7 Lonicera japonica HOM05D000295 ORTHO05D000188 2.1e-07 58.9 77 45.5
MD12G1186000 Malus domestica HOM05D000295 ORTHO05D000188 2.8e-07 58.5 50 48.0
CARHR272180 Cardamine hirsuta HOM05D000295 ORTHO05D000188 3.6e-07 58.2 55 49.1
Phvul.010G067900 Phaseolus vulgaris HOM05D000295 ORTHO05D000188 3.6e-07 58.2 46 54.3
Hund03730 Selenicereus undatus HOM05D000295 ORTHO05D000188 3.6e-07 58.2 58 50.0
A10p15910 Brassica napus HOM05D000295 ORTHO05D000188 4.7e-07 57.8 49 53.1
BraA10t43634Z Brassica rapa HOM05D000295 ORTHO05D000188 4.7e-07 57.8 49 53.1
BcaB08g36172 Brassica carinata HOM05D000295 ORTHO05D000188 6.2e-07 57.4 53 49.1
Glyma.03G036500 Glycine max HOM05D000295 ORTHO05D000188 8.1e-07 57.0 45 53.3
unitig_22.g6606 Utricularia gibba HOM05D000295 ORTHO05D000188 8.1e-07 57.0 44 59.1
EL10Ac7g17071 Beta vulgaris HOM05D000295 ORTHO05D000188 1.1e-06 56.6 70 44.3
Ca_19757_v3 Cicer arietinum L. HOM05D000295 ORTHO05D000188 1.1e-06 56.6 45 55.6
ClCG04G006400 Citrullus lanatus HOM05D000295 ORTHO05D000188 1.1e-06 56.6 66 42.4
AUR62006370 Chenopodium quinoa HOM05D000295 ORTHO05D000188 1.4e-06 56.2 66 45.5
Aa31LG11G140 Aethionema arabicum HOM05D000295 ORTHO05D000188 1.8e-06 55.8 43 55.8
TPR.G4972 Trifolium pratense HOM05D000295 ORTHO05D000188 1.8e-06 55.8 45 51.1
MELO3C025211.2 Cucumis melo HOM05D000295 ORTHO05D000188 2.4e-06 55.5 68 42.6
A03p12290 Brassica napus HOM05D000295 ORTHO05D000188 3.1e-06 55.1 53 47.2
BraA03t10540Z Brassica rapa HOM05D000295 ORTHO05D000188 3.1e-06 55.1 53 47.2
Medtr4g028830 Medicago truncatula HOM05D000295 ORTHO05D000188 3.1e-06 55.1 47 46.8
Hund19787 Selenicereus undatus HOM05D000295 ORTHO05D000188 3.1e-06 55.1 66 42.4
AT5G58350 Arabidopsis thaliana HOM05D000295 ORTHO05D000188 6.9e-06 53.9 53 49.1
AL8G34450 Arabidopsis lyrata HOM05D000295 ORTHO05D000188 9.0e-06 53.5 68 42.6
Sp6g20010 Schrenkiella parvula HOM05D000295 ORTHO05D000188 9.0e-06 53.5 53 47.2
Sed0022253 Sechium edule HOM05D000295 ORTHO05D000188 9.0e-06 53.5 49 49.0


User provided reference genes

Program Settings