Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 2.9e-58 228.4 118 100.0
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 9.5e-38 160.2 116 72.4
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 2.1e-37 159.1 116 69.0
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 2.2e-34 149.1 116 66.4
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.1e-33 146.7 116 65.5
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 7.1e-33 144.1 117 65.8
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 2.7e-32 142.1 117 67.5
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 6.0e-32 141.0 116 61.2
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.0e-31 140.2 116 62.1
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 1.0e-31 140.2 116 59.5
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.3e-31 139.8 116 61.2
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 2.3e-31 139.0 116 63.8
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 2.3e-31 139.0 116 62.9
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 3.0e-31 138.7 117 60.7
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 3.0e-31 138.7 116 60.3
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.0e-31 138.7 116 60.3
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.9e-31 138.3 116 62.9
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 5.1e-31 137.9 116 57.8
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.1e-31 137.9 118 58.5
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 5.1e-31 137.9 117 60.7
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 6.6e-31 137.5 116 59.5
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 6.6e-31 137.5 116 61.2
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-30 136.7 118 57.6
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.5e-30 136.3 116 60.3
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 2.5e-30 135.6 116 59.5
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 3.3e-30 135.2 116 61.2
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 4.3e-30 134.8 116 56.9
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 4.3e-30 134.8 116 60.3
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 5.6e-30 134.4 116 56.9
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 7.3e-30 134.0 116 57.8
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 7.3e-30 134.0 116 61.2
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 2.1e-29 132.5 117 59.8
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 2.8e-29 132.1 116 54.3
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 3.6e-29 131.7 118 55.9
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 3.6e-29 131.7 118 55.9
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 4.7e-29 131.3 116 58.6
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 6.2e-29 131.0 116 57.8
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 3.1e-28 128.6 116 54.3
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 5.2e-28 127.9 116 56.0
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 5.2e-28 127.9 118 54.2
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 2.6e-27 125.6 118 55.9
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 4.4e-27 124.8 118 54.2
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 5.8e-27 124.4 117 57.3
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 9.9e-27 123.6 78 76.9
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.7e-26 122.9 116 56.9
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.2e-26 122.5 116 52.6
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 2.9e-26 122.1 116 53.4
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 1.4e-25 119.8 116 55.2
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.9e-25 119.4 116 50.9
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 2.4e-25 119.0 117 53.0
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 3.2e-25 118.6 116 50.9
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 4.2e-25 118.2 118 52.5
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 5.4e-25 117.9 116 54.3
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 7.1e-25 117.5 116 53.4
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 2.1e-24 115.9 116 56.0
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.7e-24 115.5 116 52.6
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 2.7e-24 115.5 116 53.4
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.7e-24 115.5 116 49.1
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.3e-23 113.2 119 55.5
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 3.0e-23 112.1 116 52.6
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 3.9e-23 111.7 116 51.7
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 3.9e-23 111.7 116 51.7
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 5.1e-23 111.3 116 46.6
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 5.1e-23 111.3 116 48.3
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 5.1e-23 111.3 117 48.7
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 6.6e-23 110.9 116 51.7
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 6.6e-23 110.9 118 51.7
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 6.6e-23 110.9 118 48.3
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 1.5e-22 109.8 118 52.5
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.5e-22 109.8 116 47.4
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.3e-22 108.6 116 45.7
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.3e-22 108.6 116 45.7
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 4.3e-22 108.2 116 49.1
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 7.3e-22 107.5 117 52.1
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.3e-21 106.7 115 47.8
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.3e-21 106.7 116 46.6
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.6e-21 106.3 117 48.7
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 2.1e-21 105.9 116 46.6
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 2.1e-21 105.9 116 44.8
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.1e-21 105.9 114 46.5
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 2.8e-21 105.5 116 46.6
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 4.8e-21 104.8 116 48.3
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 4.8e-21 104.8 119 47.1
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 6.2e-21 104.4 116 48.3
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 8.1e-21 104.0 116 47.4
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.4e-20 103.2 117 44.4
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 2.4e-20 102.4 117 49.6
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 2.4e-20 102.4 98 55.1
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 4.0e-20 101.7 116 46.6
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 5.3e-20 101.3 114 49.1
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 5.3e-20 101.3 116 46.6
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 9.0e-20 100.5 116 49.1
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 9.0e-20 100.5 116 46.6
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.2e-19 100.1 119 47.1
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.5e-19 99.8 117 47.0
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 2.0e-19 99.4 117 46.2
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 2.0e-19 99.4 102 47.1
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.4e-19 98.6 116 48.3
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 9.9e-19 97.1 116 41.4
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.3e-18 96.7 116 40.5
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.3e-18 96.7 116 41.4
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.7e-18 96.3 119 46.2
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.1e-17 93.6 119 47.1
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 4.6e-16 88.2 116 43.1
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.0e-15 87.0 95 52.6
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.4e-12 76.6 121 38.8


User provided reference genes

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