Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 2.3e-52 208.8 115 100.0
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 6.2e-42 174.1 110 81.8
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 1.7e-23 112.8 114 55.3
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 1.6e-18 96.3 110 51.8
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 2.2e-18 95.9 110 51.8
Migut.F01037 Erythranthe guttata HOM05D007326 ORTHO05D009048 2.1e-13 79.3 101 50.5
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.8e-12 76.3 117 39.3
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 1.8e-12 76.3 114 40.4
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 2.3e-12 75.9 98 40.8
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 6.7e-12 74.3 121 43.8
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 1.5e-11 73.2 116 41.4
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 3.3e-11 72.0 34 85.3
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 3.3e-11 72.0 93 39.8
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 3.3e-11 72.0 128 43.0
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 5.7e-11 71.2 121 38.0
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 5.7e-11 71.2 118 39.8
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 5.7e-11 71.2 118 46.6
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 9.7e-11 70.5 125 43.2
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 9.7e-11 70.5 102 40.2
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 1.3e-10 70.1 121 39.7
SGA_v2.0_scaffold46G17378 Striga asiatica HOM05D007326 ORTHO05D009048 1.3e-10 70.1 103 44.7
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 1.7e-10 69.7 97 50.5
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 1.7e-10 69.7 114 38.6
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 1.7e-10 69.7 96 44.8
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 2.2e-10 69.3 70 51.4
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 2.2e-10 69.3 115 45.2
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 2.2e-10 69.3 125 45.6
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 2.2e-10 69.3 95 43.2
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 2.2e-10 69.3 112 38.4
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 2.8e-10 68.9 114 46.5
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 2.8e-10 68.9 124 39.5
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 3.7e-10 68.6 124 39.5
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 3.7e-10 68.6 124 39.5
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 4.8e-10 68.2 92 42.4
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 6.3e-10 67.8 33 84.8
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 8.2e-10 67.4 62 50.0
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 8.2e-10 67.4 125 42.4
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 8.2e-10 67.4 126 38.9
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 8.2e-10 67.4 33 84.8
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 1.1e-09 67.0 123 41.5
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 1.1e-09 67.0 31 87.1
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 1.1e-09 67.0 117 35.9
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 1.1e-09 67.0 31 87.1
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 1.4e-09 66.6 123 41.5
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 1.4e-09 66.6 110 39.1
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 1.8e-09 66.2 119 42.0
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 1.8e-09 66.2 102 40.2
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 2.4e-09 65.9 30 86.7
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 2.4e-09 65.9 31 87.1
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 3.1e-09 65.5 121 39.7
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 3.1e-09 65.5 31 87.1
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 3.1e-09 65.5 31 87.1
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 3.1e-09 65.5 31 87.1
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 4.1e-09 65.1 30 86.7
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 4.1e-09 65.1 115 45.2
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 4.1e-09 65.1 33 84.8
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 4.1e-09 65.1 31 83.9
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 5.3e-09 64.7 54 66.7
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 5.3e-09 64.7 30 86.7
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 5.3e-09 64.7 74 58.1
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 5.3e-09 64.7 114 45.6
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 5.3e-09 64.7 97 40.2
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 6.9e-09 64.3 31 83.9
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 9.1e-09 63.9 31 83.9
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 9.1e-09 63.9 31 83.9
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 9.1e-09 63.9 31 83.9
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 9.1e-09 63.9 31 83.9
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 9.1e-09 63.9 89 48.3
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 9.1e-09 63.9 119 38.7
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 9.1e-09 63.9 129 38.0
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 9.1e-09 63.9 131 38.9
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 9.1e-09 63.9 31 83.9
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 1.5e-08 63.2 115 40.0
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 1.5e-08 63.2 72 44.4
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 2.0e-08 62.8 117 36.8
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 2.6e-08 62.4 113 37.2
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 4.5e-08 61.6 71 52.1
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 4.5e-08 61.6 89 40.4
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 5.9e-08 61.2 115 37.4
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.0e-07 60.5 126 40.5
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 1.0e-07 60.5 111 38.7
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 1.0e-07 60.5 31 80.6
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 1.0e-07 60.5 122 36.1
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.3e-07 60.1 114 43.9
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.3e-07 60.1 75 44.0
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 2.2e-07 59.3 115 33.9
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 2.9e-07 58.9 111 43.2
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 2.9e-07 58.9 111 43.2
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 2.9e-07 58.9 33 75.8
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 5.0e-07 58.2 111 41.4
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 5.0e-07 58.2 111 41.4
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 5.0e-07 58.2 109 38.5
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 5.0e-07 58.2 105 38.1
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 6.5e-07 57.8 93 50.5
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 6.5e-07 57.8 114 43.0
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 8.5e-07 57.4 104 34.6
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.1e-06 57.0 109 39.4
CBR_g41366 Chara braunii HOM05D007326 ORTHO05D009048 1.9e-06 56.2 26 84.6
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.9e-06 56.2 104 41.3
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 4.2e-06 55.1 30 76.7


User provided reference genes

Program Settings