Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 1.2e-59 233.4 161 100.0
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 3.7e-32 142.1 168 67.9
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 7.2e-28 127.9 168 64.9
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 7.2e-28 127.9 168 64.9
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 1.4e-23 113.6 162 56.2
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 6.9e-23 111.3 170 51.8
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.5e-22 110.2 173 57.2
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 5.9e-22 108.2 171 45.6
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 1.3e-21 107.1 168 60.1
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.7e-21 106.7 159 45.9
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 1.7e-21 106.7 171 59.1
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.9e-20 103.2 168 44.0
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 5.5e-20 101.7 166 51.2
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 3.6e-19 99.0 167 52.1
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 1.0e-18 97.4 170 55.3
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.0e-18 97.4 167 53.9
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 1.4e-18 97.1 164 59.1
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 3.9e-18 95.5 168 55.4
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 3.9e-18 95.5 168 54.2
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 6.7e-18 94.7 172 54.7
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 6.7e-18 94.7 173 54.9
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 8.8e-18 94.4 167 50.3
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.5e-17 93.6 175 45.1
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 1.5e-17 93.6 158 50.6
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 3.3e-17 92.4 170 48.8
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 4.4e-17 92.0 170 54.1
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 4.4e-17 92.0 168 57.7
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 4.4e-17 92.0 174 55.2
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 7.4e-17 91.3 175 54.3
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 7.4e-17 91.3 103 59.2
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 7.4e-17 91.3 164 43.3
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 9.7e-17 90.9 164 43.3
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 9.7e-17 90.9 175 55.4
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.3e-16 90.5 168 54.8
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.3e-16 90.5 172 54.7
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.7e-16 90.1 136 46.3
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 2.2e-16 89.7 176 54.0
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 2.2e-16 89.7 169 56.2
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 3.7e-16 89.0 173 49.1
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 3.7e-16 89.0 175 54.9
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 8.2e-16 87.8 163 40.5
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 1.1e-15 87.4 167 52.1
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-15 87.4 164 47.0
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.1e-15 87.4 163 40.5
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 1.8e-15 86.7 171 52.0
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.1e-15 85.9 164 40.9
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.1e-15 85.5 128 46.1
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 4.1e-15 85.5 167 52.1
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 5.3e-15 85.1 180 44.4
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 6.9e-15 84.7 173 52.0
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 6.9e-15 84.7 163 54.6
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 9.1e-15 84.3 165 52.1
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 9.1e-15 84.3 165 52.1
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 9.1e-15 84.3 159 53.5
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.2e-14 84.0 165 40.0
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.5e-14 83.6 164 51.8
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 2.0e-14 83.2 168 53.0
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 2.0e-14 83.2 178 48.3
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 2.0e-14 83.2 168 53.0
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 3.4e-14 82.4 160 36.9
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 3.4e-14 82.4 160 36.9
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 4.5e-14 82.0 174 43.1
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 4.5e-14 82.0 162 48.8
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 7.7e-14 81.3 162 37.7
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 7.7e-14 81.3 170 54.7
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 1.3e-13 80.5 167 54.5
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.7e-13 80.1 162 37.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.7e-13 80.1 154 50.6
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 1.7e-13 80.1 174 47.1
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 2.9e-13 79.3 200 47.0
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 3.8e-13 79.0 200 45.5
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 5.0e-13 78.6 168 54.8
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 6.5e-13 78.2 164 51.8
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.1e-12 77.4 102 53.9
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 1.1e-12 77.4 164 50.6
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.4e-12 77.0 165 49.7
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.4e-12 77.0 174 44.3
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 1.4e-12 77.0 129 55.0
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.9e-12 76.6 175 50.9
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.5e-12 76.3 175 49.7
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 3.2e-12 75.9 167 53.3
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 3.2e-12 75.9 161 51.6
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 4.2e-12 75.5 162 48.1
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 4.2e-12 75.5 129 57.4
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 4.2e-12 75.5 155 52.3
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 7.2e-12 74.7 158 55.1
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 1.6e-11 73.6 167 34.7
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 2.7e-11 72.8 172 50.6
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 4.7e-11 72.0 172 50.6
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 4.7e-11 72.0 168 41.1
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 6.1e-11 71.6 162 51.2
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.4e-10 70.5 161 42.2
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 3.0e-10 69.3 163 33.7
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 3.0e-10 69.3 162 50.6
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 3.0e-10 69.3 157 52.9
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 3.0e-10 69.3 180 50.0
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 3.0e-10 69.3 158 51.3
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 3.9e-10 68.9 161 34.2
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 3.9e-10 68.9 161 34.2
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 6.7e-10 68.2 162 34.0
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 6.7e-10 68.2 172 33.1
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 6.7e-10 68.2 176 48.3
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 8.8e-10 67.8 159 35.2
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.1e-09 67.4 158 46.2
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 1.1e-09 67.4 160 35.6
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 1.5e-09 67.0 161 51.6
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 3.3e-09 65.9 158 33.5
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 3.3e-09 65.9 158 33.5
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 3.3e-09 65.9 158 33.5
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 3.3e-09 65.9 158 48.7
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 3.3e-09 65.9 117 37.6
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 4.4e-09 65.5 117 38.5
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 5.7e-09 65.1 118 58.5
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 5.7e-09 65.1 158 51.9
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 7.4e-09 64.7 125 38.4
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 9.7e-09 64.3 159 39.6
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 9.7e-09 64.3 157 33.8
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.7e-08 63.5 121 36.4
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 2.2e-08 63.2 102 46.1
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 2.2e-08 63.2 155 51.6
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 3.7e-08 62.4 112 37.5
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 3.7e-08 62.4 155 54.2
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 6.3e-08 61.6 166 48.2
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.1e-07 60.8 157 47.1
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 1.4e-07 60.5 119 59.7
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 3.1e-07 59.3 121 36.4
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 3.1e-07 59.3 88 67.0
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 4.1e-07 58.9 165 47.3
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 5.3e-07 58.5 143 35.7
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 9.1e-07 57.8 120 35.8
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 2.6e-06 56.2 102 43.1
ECA246G0037 Erigeron canadensis HOM05D005335 ORTHO05D006472 4.5e-06 55.5 165 48.5


User provided reference genes

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