Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 3.4e-113 411.8 218 100.0
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 6.8e-82 307.8 171 93.0
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 1.7e-69 266.5 170 79.4
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 4.3e-68 261.9 193 73.6
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.3e-67 260.4 197 72.6
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 8.1e-67 257.7 184 71.2
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.4e-66 256.9 176 76.7
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 1.8e-66 256.5 175 76.6
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 2.4e-66 256.1 190 73.7
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 2.4e-66 256.1 191 71.7
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 3.4e-65 252.3 190 72.1
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 1.7e-64 250.0 191 70.7
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 2.2e-64 249.6 195 69.2
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 3.8e-64 248.8 235 64.3
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 3.8e-64 248.8 182 72.5
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 4.9e-64 248.4 183 74.9
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 4.9e-64 248.4 180 72.8
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 4.9e-64 248.4 184 69.0
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 4.9e-64 248.4 194 67.5
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 6.4e-64 248.1 192 69.3
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 6.4e-64 248.1 194 67.5
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 1.1e-63 247.3 176 71.6
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.4e-63 246.9 194 67.5
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 1.9e-63 246.5 173 75.1
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 1.9e-63 246.5 182 75.3
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 1.9e-63 246.5 183 70.5
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 3.2e-63 245.7 179 72.6
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 4.2e-63 245.4 202 66.3
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 4.2e-63 245.4 143 82.5
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 7.1e-63 244.6 235 61.3
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 9.3e-63 244.2 173 73.4
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 2.1e-62 243.0 180 71.7
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 2.7e-62 242.7 197 69.0
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 3.5e-62 242.3 179 70.4
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 3.5e-62 242.3 189 69.3
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 3.5e-62 242.3 194 66.0
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 6.0e-62 241.5 172 73.3
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 1.3e-61 240.4 176 71.6
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 1.3e-61 240.4 160 78.8
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.3e-61 240.4 179 69.8
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 1.8e-61 240.0 182 68.7
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.8e-61 240.0 189 68.3
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.8e-61 240.0 225 61.3
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 3.0e-61 239.2 179 70.9
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 5.1e-61 238.4 197 67.5
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 8.7e-61 237.7 209 63.2
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 1.1e-60 237.3 172 72.1
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 1.1e-60 237.3 175 71.4
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 1.1e-60 237.3 175 71.4
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 1.9e-60 236.5 190 65.8
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 5.6e-60 235.0 203 66.5
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 5.6e-60 235.0 143 78.3
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.3e-59 233.8 158 77.8
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 1.3e-59 233.8 210 60.0
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 1.3e-59 233.8 197 64.5
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 1.6e-59 233.4 180 67.8
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 2.1e-59 233.0 143 79.0
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.8e-59 232.6 203 66.0
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 6.2e-59 231.5 143 81.1
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 5.3e-58 228.4 134 83.6
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 5.3e-58 228.4 233 60.1
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 9.0e-58 227.6 174 72.4
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 9.0e-58 227.6 192 62.5
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.5e-57 226.9 188 61.7
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 1.5e-57 226.9 198 64.1
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 3.4e-57 225.7 143 77.6
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 3.4e-57 225.7 174 68.4
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 9.9e-57 224.2 195 62.1
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 1.3e-56 223.8 195 62.6
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.7e-56 223.4 195 62.1
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 1.7e-56 223.4 184 63.0
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 2.2e-56 223.0 131 84.7
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 2.9e-56 222.6 222 58.1
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 3.8e-56 222.2 192 66.7
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 6.4e-56 221.5 221 61.1
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 8.4e-56 221.1 158 72.2
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.4e-55 220.3 185 63.2
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 3.2e-55 219.2 197 60.9
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 3.2e-55 219.2 197 60.9
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.2e-55 219.2 171 64.9
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 3.2e-55 219.2 150 74.7
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 4.2e-55 218.8 198 60.1
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 4.2e-55 218.8 198 60.1
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.6e-54 216.9 179 67.0
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 2.1e-54 216.5 228 54.4
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 1.8e-53 213.4 193 64.2
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 1.6e-51 206.8 257 50.2
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 5.3e-50 201.8 147 68.7
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 9.0e-50 201.1 202 56.9
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 3.9e-45 185.7 171 60.2
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 1.4e-42 177.2 179 57.0
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 1.8e-42 176.8 193 53.4
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 1.8e-42 176.8 181 54.7
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 7.6e-41 171.4 136 61.0
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 9.3e-39 164.5 159 61.6
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 6.1e-38 161.8 92 82.6
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 1.2e-33 147.5 138 62.3
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 8.5e-32 141.4 178 48.3
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 1.9e-31 140.2 159 56.0
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 3.6e-30 136.0 204 45.1
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 3.3e-28 129.4 173 53.2
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 3.3e-28 129.4 173 53.2
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 7.4e-28 128.3 131 55.0
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 3.8e-24 115.9 146 47.9
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 3.1e-18 96.3 97 60.8
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 4.1e-18 95.9 80 70.0
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 9.1e-18 94.7 108 54.6
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 3.5e-17 92.8 114 52.6
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.2e-16 90.1 108 42.6
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 2.6e-12 76.6 55 70.9
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.3e-08 64.3 37 83.8
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 2.2e-08 63.5 31 80.6
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.9e-07 60.5 31 74.2
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 2.5e-07 60.1 127 39.4


User provided reference genes

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