Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 6.9e-72 273.9 137 100.0
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.2e-07 60.5 80 48.8
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 1.2e-07 60.5 44 65.9
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.2e-07 60.5 40 67.5
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 1.6e-07 60.1 44 63.6
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 2.7e-07 59.3 39 71.8
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.7e-07 59.3 35 74.3
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 2.7e-07 59.3 40 67.5
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 4.5e-07 58.5 66 47.0
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 4.5e-07 58.5 33 75.8
Ah.12g060990 Amaranthus hybridus HOM05D006934 ORTHO05D008743 5.9e-07 58.2 78 43.6
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.9e-07 58.2 39 69.2
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 5.9e-07 58.2 37 70.3
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 7.7e-07 57.8 44 63.6
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 7.7e-07 57.8 32 78.1
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 1.0e-06 57.4 39 66.7
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.0e-06 57.4 51 56.9
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.0e-06 57.4 51 54.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 1.0e-06 57.4 32 78.1
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.3e-06 57.0 77 46.8
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.7e-06 56.6 44 59.1
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.7e-06 56.6 39 64.1
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.3e-06 56.2 44 61.4
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 2.3e-06 56.2 32 78.1
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.9e-06 55.8 38 63.2
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 3.8e-06 55.5 39 64.1
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 3.8e-06 55.5 52 51.9
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.8e-06 55.5 32 78.1
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 3.8e-06 55.5 32 78.1
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 3.8e-06 55.5 32 78.1
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 3.8e-06 55.5 32 75.0
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 5.0e-06 55.1 38 65.8
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 5.0e-06 55.1 44 59.1
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 5.0e-06 55.1 32 78.1
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 5.0e-06 55.1 38 65.8
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 6.6e-06 54.7 38 65.8
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 8.6e-06 54.3 59 52.5
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 8.6e-06 54.3 39 61.5
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 8.6e-06 54.3 40 67.5
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 8.6e-06 54.3 59 52.5
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 8.6e-06 54.3 59 52.5
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 8.6e-06 54.3 32 75.0
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 8.6e-06 54.3 32 75.0
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 8.6e-06 54.3 58 50.0


User provided reference genes

Program Settings