Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 2.9e-144 515.4 290 100.0
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.3e-101 372.9 332 64.2
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 3.5e-57 226.1 285 51.6
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 2.8e-54 216.5 374 43.9
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 4.1e-50 202.6 394 38.8
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 1.2e-49 201.1 394 40.4
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.7e-48 197.2 405 40.7
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 1.1e-47 194.5 408 40.2
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 5.6e-47 192.2 405 37.5
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 7.3e-47 191.8 405 38.5
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 2.8e-46 189.9 424 42.0
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 8.0e-46 188.3 418 37.8
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 1.4e-45 187.6 409 37.4
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 3.1e-45 186.4 385 36.9
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 6.8e-45 185.3 412 38.6
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 6.8e-45 185.3 410 37.1
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 8.9e-45 184.9 441 40.4
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 1.5e-44 184.1 403 36.2
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 5.8e-44 182.2 380 39.5
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 5.8e-44 182.2 398 36.4
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 9.8e-44 181.4 426 37.3
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 9.8e-44 181.4 397 40.8
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 4.9e-43 179.1 345 40.0
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 1.4e-42 177.6 397 38.8
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.4e-42 176.8 376 35.9
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 7.0e-42 175.3 376 35.6
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 1.6e-41 174.1 401 37.7
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 1.6e-41 174.1 385 38.2
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 3.5e-41 172.9 403 37.0
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 3.5e-41 172.9 392 38.0
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 4.6e-41 172.6 382 40.1
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 4.6e-41 172.6 407 42.5
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.3e-40 171.0 380 37.6
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 4.3e-39 166.0 409 40.1
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 5.6e-39 165.6 414 39.9
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 7.3e-39 165.2 376 35.1
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.1e-38 163.7 375 40.8
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.8e-38 163.3 391 36.1
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 3.6e-38 162.9 304 38.8
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.1e-37 161.4 410 38.8
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.8e-37 160.6 411 40.9
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.8e-37 160.6 384 38.8
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 3.1e-37 159.8 410 38.5
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 2.0e-36 157.1 407 33.7
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 2.0e-36 157.1 377 38.2
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 2.6e-36 156.8 348 35.3
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 2.6e-36 156.8 385 43.9
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 4.4e-36 156.0 381 36.0
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 2.2e-35 153.7 385 34.5
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 1.9e-34 150.6 394 35.8
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 3.2e-34 149.8 323 44.6
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 5.4e-34 149.1 457 34.1
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 2.7e-33 146.7 372 40.9
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 6.0e-33 145.6 189 53.4
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 7.8e-33 145.2 195 46.2
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 3.0e-32 143.3 393 33.8
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 5.1e-32 142.5 342 34.2
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.5e-31 141.0 423 39.2
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 5.6e-31 139.0 161 48.4
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 7.3e-31 138.7 391 37.1
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 9.5e-31 138.3 366 35.8
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 9.5e-31 138.3 353 34.0
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 1.6e-30 137.5 334 41.0
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.1e-30 137.1 396 32.1
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 3.6e-30 136.3 372 32.3
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 8.1e-30 135.2 350 39.1
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 1.8e-29 134.0 318 34.3
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 2.3e-29 133.7 395 38.0
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.0e-29 132.9 161 48.4
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 5.2e-29 132.5 385 37.4
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 7.6e-28 128.6 310 34.8
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 3.8e-27 126.3 370 33.0
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 4.9e-27 125.9 391 31.5
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 1.9e-26 124.0 330 38.8
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 4.1e-26 122.9 321 32.7
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 5.4e-26 122.5 288 41.7
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 7.1e-26 122.1 351 31.9
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 7.1e-26 122.1 372 31.2
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 9.2e-26 121.7 363 31.4
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 7.8e-25 118.6 325 37.8
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.3e-24 117.1 376 34.8
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.9e-23 114.0 430 29.1
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 2.5e-23 113.6 287 34.8
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 1.2e-22 111.3 324 34.3
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 2.1e-22 110.5 317 37.5
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 2.4e-21 107.1 73 67.1
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.2e-20 104.8 291 36.4
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 3.4e-20 103.2 278 30.9
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 1.3e-19 101.3 357 35.3
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 3.8e-19 99.8 264 38.6
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 3.8e-19 99.8 228 33.3
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 8.4e-19 98.6 300 33.3
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 4.2e-18 96.3 384 30.5
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 9.3e-18 95.1 126 57.9
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 9.3e-18 95.1 248 32.7
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 1.2e-17 94.7 289 31.1
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 1.6e-17 94.4 106 51.9
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.5e-17 93.2 193 33.7
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 7.8e-17 92.0 289 28.4
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 1.3e-14 84.7 124 45.2
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 1.3e-14 84.7 393 23.7
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 2.1e-14 84.0 89 49.4
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.2e-12 78.2 305 26.2
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 2.0e-12 77.4 237 38.8
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.7e-11 74.3 148 42.6
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 3.8e-11 73.2 235 33.6
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 3.8e-11 73.2 235 33.6
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 8.4e-11 72.0 119 44.5
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 1.9e-10 70.9 230 38.3
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 1.9e-10 70.9 230 38.3
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 2.4e-10 70.5 238 38.7
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 7.1e-10 68.9 238 38.7
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 1.2e-09 68.2 221 30.8
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.6e-09 67.8 107 45.8
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 1.6e-09 67.8 225 36.0
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 2.1e-09 67.4 226 37.2
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 2.1e-09 67.4 226 37.2
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 2.1e-09 67.4 165 40.0
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 2.7e-09 67.0 106 47.2
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 3.5e-09 66.6 74 43.2
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 3.5e-09 66.6 306 29.4
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 4.6e-09 66.2 232 32.8
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 4.6e-09 66.2 301 35.5
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 7.9e-09 65.5 280 32.9
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.8e-08 64.3 156 36.5
unitig_0.g2816 Utricularia gibba HOM05D005213 ORTHO05D006229 1.8e-08 64.3 279 28.7
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 2.3e-08 63.9 98 46.9
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 3.0e-08 63.5 95 46.3
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 3.0e-08 63.5 283 33.2
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 5.1e-08 62.8 280 32.9
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 6.7e-08 62.4 144 36.8
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 6.7e-08 62.4 152 34.2
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 2.5e-07 60.5 171 28.1
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.3e-07 59.7 257 24.9
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.1e-06 57.4 56 46.4
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 4.8e-06 56.2 164 28.0
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 8.1e-06 55.5 183 30.6
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 8.1e-06 55.5 139 36.0


User provided reference genes

Program Settings