Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030194.1 Olea europaea HOM05D000452 ORTHO05D005748 4.6e-283 977.2 505 100.0
Migut.D02233 Erythranthe guttata HOM05D000452 ORTHO05D005748 5.1e-181 638.3 507 66.7
MSTRG.21118 Avicennia marina HOM05D000452 ORTHO05D005748 1.1e-175 620.5 508 65.2
Oeu014003.1 Olea europaea HOM05D000452 ORTHO05D005748 1.9e-175 619.8 478 66.1
CSS0006947 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D005748 1.6e-174 616.7 501 64.3
Nitab4.5_0005742g0010 Nicotiana tabacum HOM05D000452 ORTHO05D005748 1.0e-173 614.0 508 63.0
Oeu001281.1 Olea europaea HOM05D000452 ORTHO05D005748 1.5e-172 610.1 389 83.8
Hma1.2p1_0307F.1_g119780 Hydrangea macrophylla HOM05D000452 ORTHO05D005748 1.1e-170 604.0 503 63.8
SGA_v2.0_scaffold180G39657 Striga asiatica HOM05D000452 ORTHO05D005748 1.1e-170 604.0 488 63.9
Nitab4.5_0000602g0100 Nicotiana tabacum HOM05D000452 ORTHO05D005748 1.4e-170 603.6 496 63.1
Peaxi162Scf00270g00311 Petunia axillaris HOM05D000452 ORTHO05D005748 2.4e-170 602.8 496 64.3
Oeu037301.1 Olea europaea HOM05D000452 ORTHO05D005748 5.9e-169 598.2 519 60.5
Actinidia03722 Actinidia chinensis HOM05D000452 ORTHO05D005748 7.7e-169 597.8 484 64.3
PGSC0003DMG400008083 Solanum tuberosum HOM05D000452 ORTHO05D005748 6.5e-168 594.7 496 62.7
Solyc11g069520.2 Solanum lycopersicum HOM05D000452 ORTHO05D005748 6.1e-166 588.2 496 62.5
GSVIVG01025200001 Vitis vinifera HOM05D000452 ORTHO05D005748 6.1e-166 588.2 514 60.9
Haze_23811 Corylus avellana HOM05D000452 ORTHO05D005748 1.8e-165 586.6 508 60.4
TAR636G2205 Trochodendron aralioides HOM05D000452 ORTHO05D005748 1.8e-165 586.6 508 62.8
Sopen11g028230 Solanum pennellii HOM05D000452 ORTHO05D005748 5.1e-165 585.1 496 62.3
Cc01_g11000 Coffea canephora HOM05D000452 ORTHO05D005748 1.1e-164 583.9 509 60.1
CiPaw.13G114400 Carya illinoinensis HOM05D000452 ORTHO05D005748 9.7e-164 580.9 508 60.8
vmacro03204 Vaccinium macrocarpon HOM05D000452 ORTHO05D005748 2.8e-163 579.3 486 62.3
Rhsim13G0095000 Rhododendron simsii HOM05D000452 ORTHO05D005748 1.5e-161 573.5 504 61.9
FAN21G3667 Fragaria x ananassa HOM05D000452 ORTHO05D005748 2.0e-161 573.2 506 60.9
FvH4_3g31960 Fragaria vesca HOM05D000452 ORTHO05D005748 3.4e-161 572.4 506 60.9
FAN11G0834 Fragaria x ananassa HOM05D000452 ORTHO05D005748 1.0e-160 570.9 506 60.7
FAN25G3410 Fragaria x ananassa HOM05D000452 ORTHO05D005748 1.3e-160 570.5 513 60.0
MD03G1119900 Malus domestica HOM05D000452 ORTHO05D005748 1.3e-160 570.5 505 60.6
CANSAT54G2994 Cannabis sativa HOM05D000452 ORTHO05D005748 7.2e-159 564.7 495 59.4
Potri.009G011400 Populus trichocarpa HOM05D000452 ORTHO05D005748 1.6e-158 563.5 502 59.6
TWI31G0927 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 1.6e-158 563.5 505 60.6
PSO339G2396 Papaver somniferum HOM05D000452 ORTHO05D005748 2.1e-158 563.1 498 58.6
MD11G1137500 Malus domestica HOM05D000452 ORTHO05D005748 1.8e-157 560.1 505 60.0
RcHm_v2.0_Chr5g0058721 Rosa chinensis HOM05D000452 ORTHO05D005748 5.1e-157 558.5 504 59.3
Manes.04G019700 Manihot esculenta HOM05D000452 ORTHO05D005748 6.7e-157 558.1 501 58.9
Glyma.11G145300 Glycine max HOM05D000452 ORTHO05D005748 3.3e-156 555.8 504 58.7
Thecc.09G342400 Theobroma cacao HOM05D000452 ORTHO05D005748 2.8e-155 552.7 500 58.2
Cfa011305 Carpinus fangiana HOM05D000452 ORTHO05D005748 3.7e-155 552.4 441 63.5
Dinv02128 Davidia involucrata HOM05D000452 ORTHO05D005748 2.4e-154 549.7 508 59.3
TAR633G0246 Trochodendron aralioides HOM05D000452 ORTHO05D005748 2.4e-154 549.7 502 59.6
TWI79G0017 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 5.3e-154 548.5 508 58.9
Gorai.003G142700 Gossypium raimondii HOM05D000452 ORTHO05D005748 1.6e-153 547.0 491 59.5
Prupe.6G103100 Prunus persica HOM05D000452 ORTHO05D005748 2.6e-153 546.2 486 60.3
Gohir.A03G032800 Gossypium hirsutum HOM05D000452 ORTHO05D005748 3.5e-153 545.8 491 59.5
HanXRQChr01g0019321 Helianthus annuus HOM05D000452 ORTHO05D005748 7.7e-153 544.7 492 58.3
Gohir.D03G135600 Gossypium hirsutum HOM05D000452 ORTHO05D005748 3.8e-152 542.3 492 58.9
Lalb_Chr01g0004351 Lupinus albus HOM05D000452 ORTHO05D005748 3.8e-152 542.3 489 57.1
Lalb_Chr19g0137171 Lupinus albus HOM05D000452 ORTHO05D005748 8.5e-152 541.2 495 57.4
Phvul.011G080300 Phaseolus vulgaris HOM05D000452 ORTHO05D005748 8.5e-152 541.2 497 57.9
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 2.5e-151 539.7 484 58.3
VMungo1127G0723 Vigna mungo HOM05D000452 ORTHO05D005748 2.5e-151 539.7 500 58.6
Lj3g0027876 Lotus japonicus HOM05D000452 ORTHO05D005748 5.5e-151 538.5 511 58.3
Sc06g0010310 Simmondsia chinensis HOM05D000452 ORTHO05D005748 1.2e-150 537.3 441 60.3
QL01p021907 Quercus lobata HOM05D000452 ORTHO05D005748 2.1e-150 536.6 604 50.8
CsaV3_1G013960 Cucumis sativus L. HOM05D000452 ORTHO05D005748 6.1e-150 535.0 485 58.8
Medtr4g058890 Medicago truncatula HOM05D000452 ORTHO05D005748 8.0e-150 534.6 474 58.4
MELO3C004897.2 Cucumis melo HOM05D000452 ORTHO05D005748 1.0e-149 534.3 498 58.0
ClCG01G013590 Citrullus lanatus HOM05D000452 ORTHO05D005748 2.3e-149 533.1 493 56.6
DCAR_022745 Daucus carota HOM05D000452 ORTHO05D005748 2.3e-149 533.1 422 62.3
Sed0009159 Sechium edule HOM05D000452 ORTHO05D005748 4.0e-149 532.3 511 56.2
arahy.Tifrunner.gnm1.ann1.S7ZFT4 Arachis hypogaea HOM05D000452 ORTHO05D005748 4.4e-148 528.9 478 57.1
arahy.Tifrunner.gnm1.ann1.I1PATR Arachis hypogaea HOM05D000452 ORTHO05D005748 5.7e-148 528.5 478 56.9
Eucgr.B02508 Eucalyptus grandis HOM05D000452 ORTHO05D005748 7.5e-148 528.1 503 58.4
Nn2g10818 Nelumbo nucifera HOM05D000452 ORTHO05D005748 9.7e-148 527.7 497 57.1
EL10Ac9g22533 Beta vulgaris HOM05D000452 ORTHO05D005748 3.7e-147 525.8 484 57.6
ECA248G3240 Erigeron canadensis HOM05D000452 ORTHO05D005748 3.7e-147 525.8 498 56.4
arahy.Tifrunner.gnm1.ann1.AXM315 Arachis hypogaea HOM05D000452 ORTHO05D005748 6.3e-147 525.0 478 56.9
AUR62042196 Chenopodium quinoa HOM05D000452 ORTHO05D005748 1.4e-146 523.9 443 61.9
Ciclev10028288m.g Citrus clementina HOM05D000452 ORTHO05D005748 5.9e-145 518.5 502 55.8
Lj2C1024T12 Lonicera japonica HOM05D000452 ORTHO05D005748 1.1e-143 514.2 439 61.5
AUR62024960 Chenopodium quinoa HOM05D000452 ORTHO05D005748 1.5e-143 513.8 451 60.3
CsaV3_1G013970 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.2e-142 510.8 498 55.2
arahy.Tifrunner.gnm1.ann1.WEDN33 Arachis hypogaea HOM05D000452 ORTHO05D005748 1.6e-142 510.4 509 55.6
HanXRQChr07g0195801 Helianthus annuus HOM05D000452 ORTHO05D005748 6.8e-141 505.0 493 53.8
CsaV3_1G013990 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.5e-140 503.8 498 55.0
Aqoxy1G01223 Aquilegia oxysepala HOM05D000452 ORTHO05D005748 3.4e-140 502.7 448 56.9
AT1G08030 Arabidopsis thaliana HOM05D000452 ORTHO05D005748 1.7e-139 500.4 478 57.1
unitig_736.g22410 Utricularia gibba HOM05D000452 ORTHO05D005748 8.3e-139 498.0 514 54.7
BcaC05g24718 Brassica carinata HOM05D000452 ORTHO05D005748 1.1e-138 497.7 506 54.7
BolC5t29365H Brassica oleracea HOM05D000452 ORTHO05D005748 1.1e-138 497.7 506 54.7
PGR102G2372 Punica granatum HOM05D000452 ORTHO05D005748 1.1e-138 497.7 500 56.2
Carub.0001s0737 Capsella rubella HOM05D000452 ORTHO05D005748 9.1e-138 494.6 479 56.2
AL1G18360 Arabidopsis lyrata HOM05D000452 ORTHO05D005748 3.5e-137 492.7 481 54.9
Lsat_1_v5_gn_1_64080 Lactuca sativa HOM05D000452 ORTHO05D005748 3.5e-137 492.7 472 56.6
BraA06t23716Z Brassica rapa HOM05D000452 ORTHO05D005748 1.0e-136 491.1 501 54.7
ECA238G2818 Erigeron canadensis HOM05D000452 ORTHO05D005748 1.0e-136 491.1 500 52.8
Thhalv10007441m.g Eutrema salsugineum HOM05D000452 ORTHO05D005748 1.0e-136 491.1 479 55.1
A08p35370 Brassica napus HOM05D000452 ORTHO05D005748 2.2e-136 490.0 501 54.9
BraA08t35443Z Brassica rapa HOM05D000452 ORTHO05D005748 2.2e-136 490.0 508 54.5
THA.LOC104826371 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 2.2e-136 490.0 471 54.6
Lj1C203G7 Lonicera japonica HOM05D000452 ORTHO05D005748 6.5e-136 488.4 455 58.7
THA.LOC104800598 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 9.5e-135 484.6 473 55.0
Sp1g06650 Schrenkiella parvula HOM05D000452 ORTHO05D005748 1.2e-134 484.2 475 54.3
BcaB02g06693 Brassica carinata HOM05D000452 ORTHO05D005748 2.1e-134 483.4 501 53.9
PSO384G2013 Papaver somniferum HOM05D000452 ORTHO05D005748 3.6e-134 482.6 445 57.5
CARHR007800 Cardamine hirsuta HOM05D000452 ORTHO05D005748 4.7e-134 482.3 436 56.9
CDE02G3238 Ceratophyllum demersum HOM05D000452 ORTHO05D005748 2.3e-133 479.9 500 53.4
C05p06050 Brassica napus HOM05D000452 ORTHO05D005748 8.8e-133 478.0 450 57.1
PSO339G5930 Papaver somniferum HOM05D000452 ORTHO05D005748 8.8e-133 478.0 445 56.9
A06p05090 Brassica napus HOM05D000452 ORTHO05D005748 1.5e-132 477.2 445 56.9
BolC8t47149H Brassica oleracea HOM05D000452 ORTHO05D005748 1.5e-132 477.2 509 53.2
Cpa.g.sc279.1 Carica papaya HOM05D000452 ORTHO05D005748 8.3e-131 471.5 443 56.4
Psat7g192440 Pisum sativum HOM05D000452 ORTHO05D005748 8.3e-131 471.5 490 53.7
C08p03470 Brassica napus HOM05D000452 ORTHO05D005748 1.1e-130 471.1 509 52.8
Aa31sc122G10 Aethionema arabicum HOM05D000452 ORTHO05D005748 1.4e-130 470.7 472 54.7
Zm00001eb271200 Zea mays HOM05D000452 ORTHO05D005748 1.4e-130 470.7 512 50.8
Zm00001eb376480 Zea mays HOM05D000452 ORTHO05D005748 5.9e-129 465.3 465 54.8
BcaB03g13356 Brassica carinata HOM05D000452 ORTHO05D005748 2.0e-124 450.3 505 50.1
ATR0048G028 Amborella trichopoda HOM05D000452 ORTHO05D005748 7.5e-124 448.4 431 55.9
CiPaw.14G081900 Carya illinoinensis HOM05D000452 ORTHO05D005748 1.8e-122 443.7 444 54.5
Ca_19270_v3 Cicer arietinum L. HOM05D000452 ORTHO05D005748 1.1e-119 434.5 490 51.0
SEGI_04235 Sequoiadendron giganteum HOM05D000452 ORTHO05D005748 2.5e-119 433.3 508 47.2
PSO063G2649 Papaver somniferum HOM05D000452 ORTHO05D005748 3.1e-117 426.4 399 56.9
Lsat_1_v5_gn_2_100281 Lactuca sativa HOM05D000452 ORTHO05D005748 3.7e-115 419.5 422 53.1
MBI07_g26020_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 8.3e-115 418.3 419 56.3
Peaxi162Scf00034g00107 Petunia axillaris HOM05D000452 ORTHO05D005748 2.4e-114 416.8 499 48.9
SalBow3G4114 Salvia bowleyana HOM05D000452 ORTHO05D005748 4.1e-114 416.0 334 63.8
TPR.G6153 Trifolium pratense HOM05D000452 ORTHO05D005748 6.6e-112 408.7 474 49.2
CsaV3_1G013980 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.8e-109 400.6 489 47.9
HPP92_008616 Vanilla planifolia HOM05D000452 ORTHO05D005748 2.6e-108 396.7 312 60.6
Atru.chr3.3611 Acer truncatum HOM05D000452 ORTHO05D005748 1.2e-105 387.9 417 54.0
RhsimUnG0046400 Rhododendron simsii HOM05D000452 ORTHO05D005748 8.9e-101 371.7 436 51.1
Hund08167 Selenicereus undatus HOM05D000452 ORTHO05D005748 5.4e-98 362.5 364 55.2
Lsat_1_v5_gn_9_37660 Lactuca sativa HOM05D000452 ORTHO05D005748 1.6e-97 360.9 307 59.0
Mapoly0061s0093 Marchantia polymorpha HOM05D000452 ORTHO05D005748 4.6e-97 359.4 504 41.7
Pp3c16_24250 Physcomitrium patens HOM05D000452 ORTHO05D005748 2.1e-89 334.0 449 43.9
Lsat_1_v5_gn_2_91861 Lactuca sativa HOM05D000452 ORTHO05D005748 7.8e-89 332.0 302 56.3
AagrBONN_evm.TU.Sc2ySwM_117.3844 Anthoceros agrestis HOM05D000452 ORTHO05D005748 3.9e-88 329.7 523 39.4
DCAR_018802 Daucus carota HOM05D000452 ORTHO05D005748 1.3e-75 288.1 295 52.9
Dinv01781 Davidia involucrata HOM05D000452 ORTHO05D005748 2.4e-74 283.9 199 68.8
SHI19559 Sapria himalayana HOM05D000452 ORTHO05D005748 1.1e-71 275.0 269 51.7
MBI10_g19822_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 1.6e-70 271.2 318 50.3
SMO134G0053 Selaginella moellendorffii HOM05D000452 ORTHO05D005748 4.0e-69 266.5 310 45.2
Dinv32733 Davidia involucrata HOM05D000452 ORTHO05D005748 2.0e-68 264.2 249 60.2
CBR_g51944 Chara braunii HOM05D000452 ORTHO05D005748 1.1e-66 258.5 474 34.2
Os06g0158200 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D005748 4.2e-66 256.5 191 66.5
Lsat_1_v5_gn_5_88800 Lactuca sativa HOM05D000452 ORTHO05D005748 7.9e-49 199.1 185 57.3
TPR.G26833 Trifolium pratense HOM05D000452 ORTHO05D005748 2.8e-46 190.7 131 67.9
Cre01.g022600 Chlamydomonas reinhardtii HOM05D000452 ORTHO05D005748 3.7e-38 163.7 279 34.4
PRCOL_00001963 Prasinoderma coloniale HOM05D000452 ORTHO05D005748 3.5e-36 157.1 469 27.1
Lsat_1_v5_gn_3_50740 Lactuca sativa HOM05D000452 ORTHO05D005748 3.6e-33 147.1 122 61.5
SHI19558 Sapria himalayana HOM05D000452 ORTHO05D000031 3.5e-28 130.6 243 33.7
Hund08166 Selenicereus undatus HOM05D000452 ORTHO05D005748 1.5e-26 125.2 88 63.6
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 7.2e-26 122.9 84 67.9
MD11G1150200 Malus domestica HOM05D000452 ORTHO05D005748 1.0e-24 119.0 80 66.2
MBI15_g38533_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 5.9e-20 103.2 132 50.0
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 2.1e-17 94.7 66 66.7
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 2.8e-17 94.4 65 67.7
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 1.4e-16 92.0 65 66.2
HPP92_008615 Vanilla planifolia HOM05D000452 ORTHO05D005748 3.0e-16 90.9 171 34.5
Lsat_1_v5_gn_4_22460 Lactuca sativa HOM05D000344 ORTHO05D005714 1.7e-11 75.1 57 64.9
C07p54990 Brassica napus HOM05D000452 ORTHO05D005748 2.9e-11 74.3 46 69.6
BcaC02g07555 Brassica carinata HOM05D000452 ORTHO05D005748 3.0e-08 64.3 67 50.7


User provided reference genes

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