Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 0.0e+00 1353.2 681 100.0
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 1.2e-244 850.1 671 66.9
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 6.8e-237 824.3 675 65.9
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 1.3e-235 820.1 696 63.6
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 2.0e-233 812.8 696 65.2
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 2.3e-232 809.3 699 63.9
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 5.6e-231 804.7 700 64.3
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 8.0e-230 800.8 666 64.0
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 1.8e-229 799.7 690 62.5
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 2.0e-228 796.2 600 69.7
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 4.4e-228 795.0 694 63.0
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 1.2e-225 786.9 710 62.0
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 6.0e-225 784.6 668 62.9
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 6.0e-225 784.6 627 66.7
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 2.3e-224 782.7 686 62.8
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 8.6e-224 780.8 642 64.6
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 1.9e-223 779.6 470 81.3
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 1.9e-223 779.6 699 62.9
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 1.9e-223 779.6 686 62.7
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 2.5e-223 779.2 459 82.4
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 5.6e-223 778.1 615 66.2
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 5.6e-223 778.1 473 81.2
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 4.7e-222 775.0 699 61.2
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 1.4e-221 773.5 645 65.0
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 3.1e-221 772.3 643 65.9
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 5.2e-221 771.5 473 80.3
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 5.2e-221 771.5 459 81.5
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 5.2e-221 771.5 691 61.2
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 6.8e-221 771.2 575 70.6
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 1.2e-220 770.4 658 64.0
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 1.2e-220 770.4 658 63.8
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 1.5e-220 770.0 658 63.7
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 1.5e-220 770.0 459 81.0
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 4.4e-220 768.5 677 62.0
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 2.9e-219 765.8 595 67.2
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 3.7e-219 765.4 582 67.4
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 2.4e-218 762.7 566 69.8
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.2e-218 762.3 670 62.7
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 5.4e-218 761.5 578 69.9
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 7.1e-218 761.1 566 69.8
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 9.2e-218 760.8 681 62.8
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 9.2e-218 760.8 665 63.0
Nitab4.5_0001997g0130 Nicotiana tabacum HOM05D003665 ORTHO05D004387 9.2e-218 760.8 453 81.2
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 1.2e-217 760.4 685 61.0
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 1.6e-217 760.0 580 69.0
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 2.7e-217 759.2 691 61.9
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.3e-216 756.9 580 67.9
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 1.7e-216 756.5 569 68.4
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 3.0e-216 755.7 459 80.4
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 3.9e-216 755.4 641 64.0
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 6.6e-216 754.6 685 60.6
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 8.6e-216 754.2 570 68.2
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 1.1e-215 753.8 691 60.2
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 1.5e-215 753.4 690 61.0
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.5e-215 753.4 473 78.4
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 2.5e-215 752.7 599 66.4
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 4.3e-215 751.9 692 60.3
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 7.3e-215 751.1 686 60.6
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 7.3e-215 751.1 568 69.2
Glyma.13G325700 Glycine max HOM05D003665 ORTHO05D004387 1.2e-214 750.4 565 69.2
Phvul.005G134800 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 1.2e-214 750.4 566 68.9
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 1.2e-214 750.4 681 61.1
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 1.6e-214 750.0 569 67.7
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 6.2e-214 748.0 676 61.2
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 8.1e-214 747.7 693 60.6
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 1.8e-213 746.5 449 80.4
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 4.0e-213 745.3 449 80.8
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 5.2e-213 745.0 569 67.8
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 5.2e-213 745.0 562 68.7
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 8.9e-213 744.2 447 81.0
Lalb_Chr24g0394651 Lupinus albus HOM05D003665 ORTHO05D004387 8.9e-213 744.2 449 80.6
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 2.0e-212 743.0 459 78.9
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 2.6e-212 742.7 632 63.9
Glyma.12G172200 Glycine max HOM05D003665 ORTHO05D004387 2.6e-212 742.7 568 68.5
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 2.6e-212 742.7 459 78.9
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 3.4e-212 742.3 697 59.7
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 4.4e-212 741.9 443 82.4
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 5.8e-212 741.5 449 80.4
VMungo1080G0406 Vigna mungo HOM05D003665 ORTHO05D004387 1.3e-211 740.3 449 80.2
EL10Ac2g02422 Beta vulgaris HOM05D003665 ORTHO05D004387 6.4e-211 738.0 699 58.8
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 1.4e-210 736.9 697 60.3
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 3.2e-210 735.7 447 80.5
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 7.1e-210 734.6 436 81.4
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 5.1e-208 728.4 661 58.7
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 1.5e-207 726.9 686 59.6
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 1.9e-207 726.5 698 59.6
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 2.5e-207 726.1 519 71.5
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 5.6e-207 724.9 692 58.5
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 9.6e-207 724.2 517 71.6
Nitab4.5_0001195g0040 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.8e-206 722.6 453 77.7
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 1.4e-205 720.3 634 63.2
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 4.4e-204 715.3 617 62.9
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 5.8e-204 714.9 473 75.7
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 1.2e-201 707.2 459 76.7
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 3.9e-200 702.2 577 63.1
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 3.9e-200 702.2 577 63.3
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 4.3e-199 698.7 685 56.8
Lsat_1_v5_gn_2_100120 Lactuca sativa HOM05D003665 ORTHO05D004387 9.6e-199 697.6 679 55.7
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 1.6e-198 696.8 688 57.3
AL4G21640 Arabidopsis lyrata HOM05D003665 ORTHO05D004387 3.6e-198 695.7 684 57.2
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 3.6e-198 695.7 577 62.6
Carub.0004s0931 Capsella rubella HOM05D003665 ORTHO05D004387 4.8e-198 695.3 688 56.5
HanXRQChr14g0452781 Helianthus annuus HOM05D003665 ORTHO05D004387 6.2e-198 694.9 681 56.2
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 1.4e-197 693.7 682 56.3
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 4.0e-197 692.2 692 55.6
CARHR121340 Cardamine hirsuta HOM05D003665 ORTHO05D004387 4.0e-197 692.2 686 56.9
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 1.2e-196 690.6 460 73.7
C04p23090 Brassica napus HOM05D003665 ORTHO05D004387 1.2e-196 690.6 574 63.2
Lsat_1_v5_gn_1_64201 Lactuca sativa HOM05D003665 ORTHO05D004387 4.4e-196 688.7 698 55.7
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.7e-195 686.8 647 61.5
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 6.4e-195 684.9 634 58.8
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 1.1e-194 684.1 691 55.4
BraA07t29601Z Brassica rapa HOM05D003665 ORTHO05D004387 1.1e-194 684.1 470 72.6
A07p18960 Brassica napus HOM05D003665 ORTHO05D004387 1.9e-194 683.3 464 73.1
AT2G28390 Arabidopsis thaliana HOM05D003665 ORTHO05D004387 4.2e-194 682.2 682 55.4
BolC4t23802H Brassica oleracea HOM05D003665 ORTHO05D004387 1.7e-192 676.8 690 55.4
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 8.7e-192 674.5 459 74.3
SEGI_12034 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 8.7e-192 674.5 609 59.3
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 6.2e-190 668.3 691 54.8
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 9.0e-189 664.5 459 69.7
DCAR_006064 Daucus carota HOM05D003665 ORTHO05D004387 5.5e-186 655.2 653 58.7
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 7.9e-185 651.4 509 68.6
SEGI_16973 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 1.5e-183 647.1 449 69.0
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 1.9e-183 646.7 405 78.8
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 9.6e-183 644.4 414 78.3
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 1.6e-182 643.7 479 67.8
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 6.5e-179 631.7 385 78.7
HPP92_006598 Vanilla planifolia HOM05D003665 ORTHO05D004387 6.0e-177 625.2 653 53.6
Gohir.D08G215600 Gossypium hirsutum HOM05D003665 ORTHO05D004387 6.1e-169 598.6 364 82.1
Ah.12g061180 Amaranthus hybridus HOM05D003665 ORTHO05D004387 1.3e-168 597.4 438 68.5
Nitab4.5_0001211g0250 Nicotiana tabacum HOM05D003665 ORTHO05D004387 3.9e-168 595.9 708 51.6
Mapoly0115s0070 Marchantia polymorpha HOM05D003665 ORTHO05D004387 8.5e-163 578.2 620 52.1
AUR62037705 Chenopodium quinoa HOM05D003665 ORTHO05D004387 1.7e-158 563.9 511 58.5
Lj2C1027G11 Lonicera japonica HOM05D003665 ORTHO05D004387 1.1e-157 561.2 688 50.7
SMO356G0046 Selaginella moellendorffii HOM05D003665 ORTHO05D004387 1.0e-155 554.7 560 51.2
AUR62020295 Chenopodium quinoa HOM05D003665 ORTHO05D004387 2.2e-155 553.5 481 60.1
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 6.5e-155 552.0 332 81.6
Nitab4.5_0005900g0050 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.1e-154 551.2 678 50.9
Pp3c3_30360 Physcomitrium patens HOM05D003665 ORTHO05D004387 7.2e-154 548.5 471 59.0
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.2e-153 547.7 333 81.7
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 2.2e-150 537.0 685 48.9
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis HOM05D003665 ORTHO05D004387 3.1e-149 533.1 470 57.0
Sabra04G0142700 Salix brachista HOM05D003665 ORTHO05D004387 7.0e-149 531.9 378 71.2
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis HOM05D003665 ORTHO05D004387 2.9e-139 500.0 431 59.2
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 8.0e-137 491.9 407 63.6
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 2.4e-133 480.3 313 74.1
Pp3c10_13820 Physcomitrium patens HOM05D003665 ORTHO05D004387 2.0e-132 477.2 411 59.6
Zm00001eb139700 Zea mays HOM05D003665 ORTHO05D004387 1.5e-122 444.5 331 65.6
PGSC0003DMG400019504 Solanum tuberosum HOM05D003665 ORTHO05D004387 2.3e-112 410.6 462 55.4
CAN.G479.67 Capsicum annuum HOM05D003665 ORTHO05D004387 1.0e-99 368.6 418 54.3
Atru.chr3.3619 Acer truncatum HOM05D003665 ORTHO05D004387 6.6e-99 365.9 249 72.3
CDE02G0373 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 3.6e-89 333.6 219 72.6
BcaB06g25423 Brassica carinata HOM05D003665 ORTHO05D004387 3.9e-83 313.5 429 46.6
CBR_g29308 Chara braunii HOM05D000019 ORTHO05D000002 8.4e-70 269.2 207 61.8
Lsat_1_v5_gn_8_29480 Lactuca sativa HOM05D003665 ORTHO05D004387 4.0e-64 250.4 165 73.3
CDE08G1291 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.2e-60 238.8 368 43.8
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 1.2e-55 222.2 159 68.6
SHI09320 Sapria himalayana HOM05D003665 ORTHO05D004387 3.2e-53 214.2 190 57.9
Cre03.g154500 Chlamydomonas reinhardtii HOM05D003665 ORTHO05D004387 4.2e-53 213.8 270 44.1
MCO05G084 Micromonas commoda HOM05D003665 ORTHO05D004387 7.2e-53 213.0 605 26.8
Actinidia13995 Actinidia chinensis HOM05D003665 ORTHO05D004387 8.7e-51 206.1 104 94.2
Lsat_1_v5_gn_6_45780 Lactuca sativa HOM05D003665 ORTHO05D004387 1.5e-50 205.3 133 73.7
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 7.4e-50 203.0 140 70.0
TPR.G35439 Trifolium pratense HOM05D003665 ORTHO05D004387 4.8e-49 200.3 144 71.5
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 2.4e-48 198.0 132 72.7
CDE02G1163 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.1e-45 189.1 267 44.2
Cfa025752 Carpinus fangiana HOM05D003665 ORTHO05D004387 1.4e-45 188.7 471 27.8
Lsat_1_v5_gn_6_39960 Lactuca sativa HOM05D003665 ORTHO05D004387 2.1e-44 184.9 123 73.2
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea HOM05D003665 ORTHO05D004387 3.8e-38 164.1 127 66.1
Duzib235G1059 Durio zibethinus HOM05D003665 ORTHO05D004387 4.4e-34 150.6 252 42.5
SHI09317 Sapria himalayana HOM05D003665 ORTHO05D004387 4.0e-27 127.5 76 77.6
Ca_23093_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 5.2e-27 127.1 64 93.8
TPR.G15544 Trifolium pratense HOM05D003665 ORTHO05D004387 2.8e-25 121.3 63 79.4
Duzib084G1104 Durio zibethinus HOM05D003665 ORTHO05D004387 1.8e-24 118.6 63 87.3
VMungo1074G0001 Vigna mungo HOM05D003665 ORTHO05D004387 9.1e-24 116.3 114 56.1
SHI09315 Sapria himalayana HOM05D003665 ORTHO05D004387 6.5e-22 110.2 68 76.5
VMungo0225G0001 Vigna mungo HOM05D003665 ORTHO05D004387 3.2e-21 107.8 68 76.5
SHI09316 Sapria himalayana HOM05D003665 ORTHO05D004387 6.1e-20 103.6 63 74.6
BolC4t27275H Brassica oleracea HOM05D003665 ORTHO05D004387 4.8e-17 94.0 130 43.8
Glyma.11G146000 Glycine max HOM05D003665 ORTHO05D004387 2.0e-15 88.6 163 38.7
Oeu002465.1 Olea europaea HOM05D003665 ORTHO05D289337 3.8e-14 84.3 183 41.0
Lalb_Chr22g0350671 Lupinus albus HOM05D003665 ORTHO05D004387 1.0e-11 76.3 43 83.7
HanXRQChr06g0179151 Helianthus annuus HOM05D003665 ORTHO05D004387 2.4e-08 65.1 36 80.6
SHI09319 Sapria himalayana HOM05D003665 ORTHO05D364815 5.9e-07 60.5 50 54.0
BraA04t17717Z Brassica rapa HOM05D003665 ORTHO05D040370 5.0e-06 57.4 64 43.8


User provided reference genes

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