Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu030182.1 Olea europaea HOM05D005728 ORTHO05D005733 2.3e-60 235.3 117 100.0
Oeu001270.1 Olea europaea HOM05D005728 ORTHO05D005733 1.8e-36 156.0 112 71.4
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 2.1e-21 105.9 117 51.3
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 1.1e-17 93.6 108 50.0
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 1.9e-17 92.8 108 50.0
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 2.1e-16 89.4 102 51.0
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 1.7e-15 86.3 107 49.5
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 9.5e-14 80.5 109 45.9
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 2.1e-13 79.3 105 45.7
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 3.6e-13 78.6 112 44.6
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 3.6e-13 78.6 111 45.0
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 3.6e-13 78.6 112 42.9
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 4.7e-13 78.2 112 42.0
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 6.2e-13 77.8 122 40.2
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 8.1e-13 77.4 103 47.6
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 8.1e-13 77.4 112 42.0
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 1.1e-12 77.0 110 44.5
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 1.4e-12 76.6 112 42.0
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.4e-12 76.6 112 42.0
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 4.0e-12 75.1 112 41.1
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 4.0e-12 75.1 112 43.8
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 5.2e-12 74.7 111 41.4
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 5.2e-12 74.7 113 43.4
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 8.9e-12 73.9 111 43.2
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.2e-11 73.6 112 43.8
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 2.0e-11 72.8 111 43.2
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 2.6e-11 72.4 114 41.2
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 3.4e-11 72.0 96 43.8
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 3.4e-11 72.0 113 40.7
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 5.8e-11 71.2 114 41.2
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 9.9e-11 70.5 96 42.7
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 9.9e-11 70.5 112 41.1
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 1.7e-10 69.7 113 39.8
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 1.7e-10 69.7 111 36.9
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 2.2e-10 69.3 108 43.5
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.2e-10 69.3 102 43.1
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.2e-10 69.3 102 43.1
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 3.7e-10 68.6 116 40.5
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 3.7e-10 68.6 108 43.5
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 4.9e-10 68.2 105 41.0
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 8.3e-10 67.4 112 38.4
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 8.3e-10 67.4 109 38.5
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.1e-09 67.0 108 38.0
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 4.1e-09 65.1 110 40.0
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 4.1e-09 65.1 103 38.8
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 4.1e-09 65.1 105 40.0
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 5.4e-09 64.7 119 35.3
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 5.4e-09 64.7 103 37.9
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 7.1e-09 64.3 114 39.5
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 7.1e-09 64.3 105 39.0
unitig_21.g20302 Utricularia gibba HOM05D005728 ORTHO05D005733 1.6e-08 63.2 73 52.1
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 2.1e-08 62.8 121 34.7
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 2.7e-08 62.4 110 35.5
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 2.7e-08 62.4 110 37.3
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.5e-08 62.0 111 42.3
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 3.5e-08 62.0 111 42.3
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 4.6e-08 61.6 110 31.8
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.6e-08 61.6 111 42.3
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 6.0e-08 61.2 113 37.2
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 6.0e-08 61.2 113 36.3
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 1.0e-07 60.5 75 41.3
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.0e-07 60.5 109 34.9
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.7e-07 59.7 117 36.8
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.7e-07 59.7 117 35.9
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 1.7e-07 59.7 109 34.9
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 2.3e-07 59.3 117 36.8
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 3.0e-07 58.9 111 35.1
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 3.0e-07 58.9 111 35.1
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 3.0e-07 58.9 118 35.6
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 5.1e-07 58.2 108 35.2
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 6.6e-07 57.8 108 36.1
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 8.6e-07 57.4 108 36.1
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 1.5e-06 56.6 115 38.3
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 1.5e-06 56.6 129 37.2
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 1.9e-06 56.2 102 41.2
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 1.9e-06 56.2 89 44.9
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.5e-06 55.8 107 35.5
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 2.5e-06 55.8 111 33.3
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 3.3e-06 55.5 93 38.7
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 3.3e-06 55.5 82 40.2
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 3.3e-06 55.5 109 33.0
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 4.3e-06 55.1 107 32.7
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 5.6e-06 54.7 113 32.7


User provided reference genes

Program Settings